Abstract

Triggers and biological processes controlling male or female gonadal differentiation vary in vertebrates, with sex determination (SD) governed by environmental factors or simple to complex genetic mechanisms that evolved repeatedly and independently in various groups. Here, we review sex evolution across major clades of vertebrates with information on SD, sexual development and reproductive modes. We offer an up-to-date review of divergence times, species diversity, genomic resources, genome size, occurrence and nature of polyploids, SD systems, sex chromosomes, SD genes, dosage compensation and sex-biased gene expression. Advances in sequencing technologies now enable us to study the evolution of SD at broader evolutionary scales, and we now hope to pursue a sexomics integrative research initiative across vertebrates. The vertebrate sexome comprises interdisciplinary and integrated information on sexual differentiation, development and reproduction at all biological levels, from genomes, transcriptomes and proteomes, to the organs involved in sexual and sex-specific processes, including gonads, secondary sex organs and those with transcriptional sex-bias. The sexome also includes ontogenetic and behavioural aspects of sexual differentiation, including malfunction and impairment of SD, sexual differentiation and fertility. Starting from data generated by high-throughput approaches, we encourage others to contribute expertise to building understanding of the sexomes of many key vertebrate species.This article is part of the theme issue ‘Challenging the paradigm in sex chromosome evolution: empirical and theoretical insights with a focus on vertebrates (Part I)’.

Highlights

  • In gonochoristic vertebrates, the genetic and cellular biological processes determining whether an undifferentiated gonad develops towards male or female exhibit great diversity [1,2]

  • Sex determination (SD) in vertebrates ranges from environmental SD (ESD) to simple or complex genetic systems (genotypic SD (GSD)) that have evolved repeatedly and independently [3,4,5,6]

  • Much of the epigenetics and genetics of SD, sex differentiation and sexual development remains poorly understood, and knowledge in homeotherms is mostly restricted to a few models such as humans, mice and chickens [7]

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Summary

Introduction

(a) Towards an integrative understanding of vertebrate sexual differentiation, development and sex determination. Teleosts show the widest variety of sex-determining mechanisms among vertebrates [107] This includes gonochorism with ESD and GSD (as well as its environmental modulation), GSD ranging from homomorphic to heteromorphic female (ZZ/ZW) or male heterogametic (XX/XY) systems, plus polygenic SD [108,109] or multiple sex chromosomes [110], with different systems evolved in closely related royalsocietypublishing.org/journal/rstb Phil. Among them sequential or simultaneous hermaphrodites and recent polyploids with specific reproductive modes, such as gynogenesis or hybridogenesis [116], still lack the characterization of their genomes, SD systems and SD genes as well as interactions of allospecific sex chromosomes in taxa of hybrid origin. XX-genotypes have been experimentally shown to increase lifespan in mice [346]

Beyond whole vertebrate genomes: a pledge for ‘sexomics’
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88. Thompson A et al 2020 The genome of the bowfin
Findings
Part I: genetic and environmental mechanisms
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