Abstract

In silico energy modeling has shown that guanine-rich regions of certain nucleic acids are capable of forming secondary structures known as G-quadruplexes. These structures are subject to unique protein binding and therefore partake in gene regulation by mediating translation of messenger RNA (mRNA). Such regulation suggests that G-quadruplex-containing mRNAs may play a role in the development of certain genetic diseases. We have selected a guanine-rich portion of the mouse cyclin-dependent kinase 5 regulatory subunit 2 (CDK5R2) mRNA 3’ untranslated region for the study of these regulatory G-quadruplexes, as this gene has been implicated in the pathogenesis of a particular inherited disorder, fragile X syndrome (FXS).

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