Abstract

Bacterial sulfate assimilation pathways provide for activation of inorganic sulfur for the biosynthesis of cysteine and methionine, through either adenosine 5'-phosphosulfate (APS) or 3'-phosphoadenosine 5'-phosphosulfate (PAPS) as intermediates. PAPS is also the substrate for sulfotransferases that produce sulfolipids, putative virulence factors, in Mycobacterium tuberculosis such as SL-1. In this report, genetic complementation using Escherichia coli mutant strains deficient in APS kinase and PAPS reductase was used to define the M. tuberculosis and Mycobacterium smegmatis CysH enzymes as APS reductases. Consequently, the sulfate assimilation pathway of M. tuberculosis proceeds from sulfate through APS, which is acted on by APS reductase in the first committed step toward cysteine and methionine. Thus, M. tuberculosis most likely produces PAPS for the sole use of this organism's sulfotransferases. Deletion of CysH from M. smegmatis afforded a cysteine and methionine auxotroph consistent with a metabolic branch point centered on APS. In addition, we have redefined the substrate specificity of the B. subtilis CysH, formerly designated a PAPS reductase, as an APS reductase, based on its ability to complement a mutant E. coli strain deficient in APS kinase. Together, these studies show that two conserved sequence motifs, CCXXRKXXPL and SXGCXXCT, found in the C termini of all APS reductases, but not in PAPS reductases, may be used to predict the substrate specificity of these enzymes. A functional domain of the M. tuberculosis CysC protein was cloned and expressed in E. coli, confirming the ability of this organism to make PAPS. The expression of recombinant M. tuberculosis APS kinase provides a means for the discovery of inhibitors of this enzyme and thus of the biosynthesis of SL-1.

Highlights

  • Bacterial sulfate assimilation pathways provide for activation of inorganic sulfur for the biosynthesis of cysteine and methionine, through either adenosine 5؅phosphosulfate (APS) or 3؅-phosphoadenosine 5؅-phosphosulfate (PAPS) as intermediates

  • We have redefined the substrate specificity of the B. subtilis CysH, formerly designated a PAPS reductase, as an APS reductase, based on its ability to complement a mutant E. coli strain deficient in APS kinase

  • Identification of cysH, cysC, and cysN Homologs in M. tuberculosis and M. smegmatis—cysH and cysC homologs were identified in M. tuberculosis, M. smegmatis, and M. avium by BLAST analysis, and for M. tuberculosis the genes corresponded to those annotated in the published genome [4]

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Summary

Sulfate Assimilation in Mycobacteria

These results provide confirmation of sequence-based identification of APS and PAPS reductases. The clarification of the sulfate assimilation pathway of M. tuberculosis provides opportunities for the study of the biosynthesis of sulfated metabolites in this and other mycobacteria. APS reductases are not found in humans and may represent unique targets for antibiotic therapy

EXPERIMENTAL PROCEDURES
Source or reference
TABLE II Oligonucleotide primers used in this study
RESULTS
DISCUSSION
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