Abstract

Autophagy, the primary recycling pathway within cells, plays a critical role in mitochondrial quality control under normal growth conditions and in the cellular response to stress. Here we provide evidence that 53BP1, a DNA damage response protein, is involved in regulating mitochondrial clearance from the cell via a type of autophagy termed mitophagy. We found that when either human or mouse cells were 53BP1-deficient, there was an increase in mitochondrial abnormalities, as observed through staining intensity, aggregation, and increased mass. Moreover, a 53BP1-depleted cell population included an increased number of cells with a high mitochondrial membrane potential (ΔΨm) relative to controls, suggesting that the loss of 53BP1 prevents initiation of mitophagy thereby leading to the accumulation of damaged mitochondria. Indeed, both 53BP1 and the mitophagy-associated protein LC3 translocated to mitochondria in response to damage induced by the mitochondrial uncoupler carbonyl cyanide m-chlorophenylhydrazone (CCCP). The recruitment of parkin, an E3-ubiquitin ligase, to mitochondria in response to CCCP treatment was significantly decreased in 53BP1-deficient cells. And lastly, using p53-deficient H1299 cells, we confirmed that the role of 53BP1 in mitophagy is independent of p53. These data support a model in which 53BP1 plays an important role in modulating mitochondrial homeostasis and in the clearance of damaged mitochondria.

Highlights

  • Mitochondria are essential organelles involved in energy production, calcium homeostasis, Fe-S cluster biogenesis, metabolic biosynthetic pathways, and cell health and survival[1,2,3,4]

  • We used 53BP1 knockdown U2OS, HeLa, knockout H1299 p53-deficient cells, and 53BP1−/− mouse embryonic fibroblasts (MEF) to investigate the physiological importance of 53BP1 in mitochondrial homeostasis, and we provide evidence that 53BP1 regulates the autophagic clearance of damaged mitochondria by promoting parkin translocation to the mitochondria

  • 53BP1 protein is predominantly a nuclear protein that plays an important role in the DNA damage response (DDR) signaling pathway and in DNA repair[24,25,26,27]

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Summary

Introduction

Mitochondria are essential organelles involved in energy production, calcium homeostasis, Fe-S cluster biogenesis, metabolic biosynthetic pathways, and cell health and survival[1,2,3,4]. This process is dependent on the ATM/ATR-induced phosphorylation of histone H2AX (γ-H2AX)[22,23]. In addition to forming DNA damage-dependent foci, 53BP1 plays a pivotal role in defining the DNA double-strand break (DSB) repair pathway in the G1 and S/G2 phases of the cell cycle[24,25,26,27]. The nuclear functions of 53BP1 in the DDR and in the choice of DNA repair pathway are well established, the role of 53BP1 in the cytosol remains unknown. We used 53BP1 knockdown U2OS, HeLa, knockout H1299 p53-deficient cells, and 53BP1−/− mouse embryonic fibroblasts (MEF) to investigate the physiological importance of 53BP1 in mitochondrial homeostasis, and we provide evidence that 53BP1 regulates the autophagic clearance of damaged mitochondria by promoting parkin translocation to the mitochondria

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