2D-QSAR Studies of Dopamine Transporter Inhibitors (DAT) Using OPS and GA Variable Selection Approaches

Abstract

Today, drug abuse has developed into a social problem and begun to demand specific measures from different social sectors and government agencies all over the world. Despite significant efforts made toward relevant mechanistic targets, such as the dopamine transporter (DAT), the development of pharmacotherapeutic treatments of psychostimulant abuse has remained a challenge so far. Using a set of 49 2-[(diphenylmethyl)sulfanyl]ethanamines described as DAT inhibitors, 2D-QSAR/PLS studies were performed using two different approaches of variable selection: Ordered predictors selection (OPS) and genetic algorithm (GA). All structures were optimized at the B3LYP/6-311G++(d,p) level of theory. The molecular descriptors were obtained in the Dragon 6 program (topological, geometric, molecular, and constitutional) and GaussView 03 (electronic). Both models were formed by two latent variables. Model 1 (OPS) was constructed with four molecular descriptors (GATS3m, Mor15p, SpMin3_Bh(s), and HOMO-1), while six (Mor13m, CATS2D_09_LL, RDF110u, RDF085m, Mor24s, and RDF010s) were required to obtain model 2 (GA). The models can be considered reasonably different: In model 1, electronic features predominate, whereas in model 2, steric and geometric effects do. The overall test indicated that models 1 and 2 have equivalent predictive ability (Average r2m Overall = 0.730 versus 0.710 and Delta r2m Overall = 0.122 versus 0.151). However, model 1 is simpler (it has only four descriptors, which facilitates its interpretation), presents more relevant information used in the construction of its two latent variables (75.99% versus 64.07%), and its calibration is more significant than that of model 2 (Fn,n−p−1 = 115.814 versus 80.888, for the same tabled F value, where n = 36, and n − p − 1 = 3.256, with alfa = 0.05). Considering these results, although model 2 may also be considered a good result, model 1, obtained using the OPS approach for variable selection, may be considered more reliable for prediction purposes. This result is in agreement with good results previously obtained using the OPS methodology.