Результати виділення та генотипування вірусів кору, які циркулювали у 2012–2017 роках в Одеській області

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Актуальність. Циркуляція різних штамів вірусу кору тісно пов’язана з регіоном та рівнем захворюваності, оскільки циркулюючі штами можуть змінюватись в період епідемічних спалахів та в міжепідемічні періоди. За даними ВООЗ, найбільш поширеним під час епідемічних спалахів у всьому світі є генотип B3. Тому типування циркулюючих штамів вірусу кору, особливо під час епідемічного спалаху, є важливим процесом, у тому числі й з метою прогнозування розвитку епідемії. Метою даного дослідження була ідентифікація та визначення генотипу циркулюючих в Україні штамів вірусу кору в період 2012–2019 років. Матеріали та методи. Була використана та проаналізована звітна документація ДУ «Одеський обласний лабораторний центр» МОЗУ в Одеській області за 2012–2019 роки щодо дослідження матеріалів від хворих з підозрою на кір з використанням молекулярно-біологічних, генетичних, аналітичних та статистичних підходів. Відповідно до стандартного протоколу ВООЗ для секвенування та проведення філогенетичного аналізу від пацієнтів виділяли циркулюючі штами вірусу кору з використанням спеціальної культури клітин Vero/SLAM, а після культивування з отриманого вірус-вміщуючого матеріалу виділяли РНК вірусу кору та проводили ЗТ-ПЛР. Отриману кДНК відправляли на генотипування, яке проводилось у референс-лабораторії ВООЗ з діагностики кору та краснухи в м. Люксембурзі. Результати. За період 2012–2014 років було виділено 20 штамів вірусу кору з 45 проб (сеча та носоглоткові змиви) від хворих з діагнозом «кір». У 2015–2016 роках виділення вірусу не проводилось через одиничні випадки захворювання. У 2017 році було виділено 24 штами вірусу зі 164 проб. Висновки. Отримані в ДУ «Одеський обласний лабораторний центр» результати свідчать, що у міжепідемічний період 2012–2014 років у регіоні циркулював переважно генотип D4, а починаючи з 2017 року, коли спостерігається підвищення кількості захворілих, пов’язане з новим епідемічним спалахом, на півдні України циркулює переважно генотип В3, генетичної лінії MVs/Kabul.AFG/20.2014/3 B3. Як бачимо, ці дані цілком збігаються з даними, наведеними у літературних джерелах, щодо циркуляції генотипів, які зустрічались у певний час в Європейському регіоні залежно від кількості захворілих.

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