Yellow-necked Mouse Apodemus Flavicollis Research Articles

Cocirculation of Leptospira spp. and multiple orthohantaviruses in rodents, Lithuania, Northern Europe.

In Europe, zoonotic Leptospira spp. and orthohantaviruses are mainly associated with specific rodent hosts. These pathogens cause febrile human diseases with similar symptoms and disease progression. In Lithuania, the presence of Dobrava-Belgrade orthohantavirus (DOBV), Tula orthohantavirus (TULV) and Leptospira spp. in rodent reservoirs is still unknown, and Puumala orthohantavirus (PUUV) was detected in bank voles (Clethrionomys glareolus) at only one site. Therefore, we collected and screened 1617 rodents and insectivores from Lithuania for zoonotic (re-)emerging Leptospira and orthohantaviruses. We detected Leptospira DNA in six rodent species, namely striped field mouse (Apodemus agrarius), yellow-necked mouse (Apodemus flavicollis), bank vole, common vole (Microtus arvalis), field vole (Microtus agrestis) and root vole (Microtus oeconomus). Leptospira DNA was detected with an overall mean prevalence of 4.4% (range 3.7%-7.9% per rodent species). We detected DOBV RNA in 5.6% of the striped field mice, PUUV RNA in 1% of bank voles and TULV RNA in 4.6% of common voles, but no Leptospira DNA in shrews and no hantavirus-Leptospira coinfections in rodents. Based on the complete coding sequences of the three genome segments, two distant DOBV phylogenetic lineages in striped field mice, one PUUV strain in bank voles and two TULV strains in common voles were identified. The Leptospira prevalence for striped field mice and yellow-necked mice indicated a significant negative effect of the distance to water points. The detection of (re-)emerging human pathogenic Leptospira and three orthohantaviruses in rodent reservoirs in Lithuania calls for increased awareness of public health institutions and allows the improvement of molecular diagnostics for pathogen identification.

What is for dinner? Qualitative and quantitative data regarding small mammal species identified in pellets of long-eared owl (Asio otus) from Cluj-Napoca

Analysis of pellets provides information on the prey distribution, abundance, behavior and trophic relationships between Strigiformes and small mammals. By analyzing the skulls from long-eared owl (Asio otus) pellets, collected from a colony located in the Mercur Park, in Cluj- Napoca, Romania, we aimed to identify the small mammal species and to compare the results with available ones from another study conducted 2 years ago in the same area. During 7 collecting campaigns (November 2018 to March 2019) in 538 pellets a total of 1290 skulls were identified. Over the study period, the colony increased from 10 to 40 birds. Six species of small mammals were identified: the field striped mouse (Apodemus agrarius), the yellow-necked mouse (Apodemus flavicollis), the wood mouse (Apodemus sylvaticus), the European water vole (Arvicola terrestris), the field vole (Microtus agrestis) and the common vole (Microtus arvalis). Compared with the previously study, a new species was identified: the yellow-necked mouse and another one was missing: the bank vole (Myodes glareolus).

The Yellow-Necked Mouse (Apodemus flavicollis Muridae): A New Species in the Mammalian Fauna of Ilmenskii Reserve (Chelyabinsk Oblast, Southern Urals)

The Yellow-Necked Mouse (Apodemus flavicollis Muridae): A New Species in the Mammalian Fauna of Ilmenskii Reserve (Chelyabinsk Oblast, Southern Urals)

Spatial and temporal changes in the diet composition of the Eurasian eagle-owl (Bubo bubo) in Slovakia comparing three historical periods

Abstract The author evaluates his own data on the food of the Eurasian eagle-owl (Bubo bubo) in Slovakia using material he collected between 1975 and 2020. A total of 105,543 food items were identified in 254 samples taken at 136 localities. Mammals had the highest representation (Mammalia, 65 species, 58.4%), and the species composition of birds was diverse (Aves, minimally 140 species, 8.5%), but the common frog (Rana temporaria, 32.0%), from the lower vertebrates, is represented more abundantly. Invertebrates (Evertebrata, 0.1%) occurred in food residues only occasionally. The bulk of the samples were collected from eagle-owl nests. The samples were divided into three time periods (A–C), which differ in the manner of human land-use management: A up to the 1950s, with a smaller area of field plots and more extensive grazing in the uplands; B from the 1950s to the 1980s, during the Socialist period, with the concentration of agricultural production in large units; C the last 30 years, 1990 to 2020, with the gradual break-up of collective land management. The first period (A) is characterised by a strong dominance of frogs, particularly the European brown frog R. temporaria (44.6%), and a large share of small mammal species of the family Muridae (genera Apodemus and Mus). During the time of Socialism (B), eagle-owls adapted to hunting larger species of mammals and birds, and the share of frogs in their food fell by half (R. temporaria, 23.3%). With the decline in livestock production after 1990 (period C), the species diversity of birds increased: aquatic species and raptors in particular are on the rise. Successive overgrowth of pastures in the submontane zone is reducing the hunting territories of eagle-owls. The dominance of the common vole (Microtus arvalis) in their diet has gradually increased from period A (26.8%) to period C (37.3%). Data from eleven areas around Slovakia are evaluated separately for the three time periods. In period A, the highest proportion of frogs was in the Liptov region (R. temporaria, 68.2%), when eagle-owls nested deeper in the mountains. The proportion of frogs decreased towards lower areas, and in the Ponitrie (Nitra river basin) it was only 10.8%. At the same time, the share of M. arvalis and larger prey increased. A similar trend of increasing shares of larger prey towards lower locations also applied during the Socialist period (B). In the last 30 years (C), frogs in the higher river basins have given way to European water voles Arvicola amphibius and M. arvalis. In association with the progressive overgrowth of pastures, forest species such as the yellow-necked mouse (Apodemus flavicollis) and bank vole (Myodes glareolus) are increasingly prevalent, as are the white-breasted hedgehog (Erinaceus roumanicus) and various thrushes (Turdus sp.).

Canalization and developmental stability of the yellow-necked mouse (Apodemus flavicollis) mandible and cranium related to age and nematode parasitism

BackgroundMammalian mandible and cranium are well-established model systems for studying canalization and developmental stability (DS) as two elements of developmental homeostasis. Nematode infections are usually acquired in early life and increase in intensity with age, while canalization and DS of rodent skulls could vary through late postnatal ontogeny. We aimed to estimate magnitudes and describe patterns of mandibular and cranial canalization and DS related to age and parasite intensity (diversity) in adult yellow-necked mice (Apodemus flavicollis).ResultsWe found the absence of age-related changes in the levels of canalization for mandibular and cranial size and DS for mandibular size. However, individual measures of mandibular and cranial shape variance increased, while individual measures of mandibular shape fluctuating asymmetry (FA) decreased with age. We detected mandibular and cranial shape changes during postnatal ontogeny, but revealed no age-related dynamics of their covariance structure among and within individuals. Categories regarding parasitism differed in the level of canalization for cranial size and the level of DS for cranial shape. We observed differences in age-related dynamics of the level of canalization between non-parasitized and parasitized animals, as well as between yellow-necked mice parasitized by different number of nematode species. Likewise, individual measures of mandibular and cranial shape FA decreased with age for the mandible in the less parasitized category and increased for the cranium in the most parasitized category.ConclusionsOur age-related results partly agree with previous findings. However, no rodent study so far has explored age-related changes in the magnitude of FA for mandibular size or mandibular and cranial FA covariance structure. This is the first study dealing with the nematode parasitism-related canalization and DS in rodents. We showed that nematode parasitism does not affect mandibular and cranial shape variation and covariance structure among and within individuals. However, parasite intensity (diversity) is related to ontogenetic dynamics of the levels of canalization and DS. Overall, additional studies on animals from natural populations are required before drawing some general conclusions.

Mast seeding promotes evolution of scatter-hoarding.

Many plant species worldwide are dispersed by scatter-hoarding granivores: animals that hide seeds in numerous, small caches for future consumption. Yet, the evolution of scatter-hoarding is difficult to explain because undefended caches are at high risk of pilferage. Previous models have attempted to solve this problem by giving cache owners large advantages in cache recovery, by kin selection, or by introducing reciprocal pilferage of 'shared' seed resources. However, the role of environmental variability has been so far overlooked in this context. One important form of such variability is masting, which is displayed by many plant species dispersed by scatterhoarders. We use a mathematical model to investigate the influence of masting on the evolution of scatter-hoarding. The model accounts for periodically varying annual seed fall, caching and pilfering behaviour, and the demography of scatterhoarders. The parameter values are based mostly on research on European beech (Fagus sylvatica) and yellow-necked mice (Apodemus flavicollis). Starvation of scatterhoarders between mast years decreases the population density that enters masting events, which leads to reduced seed pilferage. Satiation of scatterhoarders during mast events lowers the reproductive cost of caching (i.e. the cost of caching for the future rather than using seeds for current reproduction). These reductions promote the evolution of scatter-hoarding behaviour especially when interannual variation in seed fall and the period between masting events are large. This article is part of the theme issue 'The ecology and evolution of synchronized seed production in plants'.

Herpesvirus Infection in a Breeding Population of Two Coexisting Strix Owls.

Simple SummaryAlthough infection with herpesvirus in owls has commonly been described as a highly lethal disease, there is very little information about the presence of herpesvirus and its potential impact in living owls in wild populations. Our study detected herpesvirus in a breeding population of Ural owls, which showed no clinical signs of illness nor productivity deviances (i.e., in clutch and brood size). Herpesvirus was detected in Ural owl adults and chicks, but not in a young tawny owl (despite the fact that they were in same nest and in persistent contact). Furthermore, herpesviruses were also detected in yellow-necked mice as both owls’ main prey. However, comparison of the herpesviruses detected showed that different herpesviruses are present in the owls and mice. The results of this study show that herpesvirus may be present in a Ural owl breeding population without any consequences on health and breeding performance. However, in the case of tawny owls, it seems that they are not susceptible to infection, which could be related to their polymorphism. It seems that small rodents are not a source of herpesvirus infection in owls and that the probable herpesvirus transmission pathway takes place intraspecifically, mostly from adults to young.Birds are a frequent host of a large variety of herpesviruses, and infections in them may go unnoticed or may result in fatal disease. In wild breeding populations of owls, there is very limited information about the presence, impact, and potential transmission of herpesvirus. The herpesvirus partial DNA polymerase gene was detected using polymerase chain reaction in oropharyngeal swabs of 16 out of 170 owls examined that were captured in or near nest boxes. Herpesvirus was detected in Ural owls (Strix uralensis), in both adults and young, but not in tawny owls (Strix aluco). In yellow-necked mice (Apodemus flavicollis), as the main prey of tawny owls and Ural owls in the area, herpesvirus was detected in the organs of 2 out of 40 mice captured at the same locations as the owls. Phylogenetic analysis showed that the herpesvirus sequences detected in the Ural owls differed from the herpesvirus sequences detected in the yellow-necked mice. The results indicate that herpesvirus infection exists in the breeding wild Ural owl population. However, herpesvirus-infected owls did not show any clinical or productivity deviances and, based on a phylogenetic comparison of detected herpesvirus sequences and sequences obtained from Genbank database, it seems that mice and other rodents are not the source of owl infections. The most probable transmission pathway is intraspecific, especially from adults to their chicks, but the origin of herpesvirus in owls remains to be investigated.

New Data on Organization and Spatial Localization of B-Chromosomes in Cell Nuclei of the Yellow-Necked Mouse Apodemus flavicollis.

The gene composition, function and evolution of B-chromosomes (Bs) have been actively discussed in recent years. However, the additional genomic elements are still enigmatic. One of Bs mysteries is their spatial organization in the interphase nucleus. It is known that heterochromatic compartments are not randomly localized in a nucleus. The purpose of this work was to study the organization and three-dimensional spatial arrangement of Bs in the interphase nucleus. Using microdissection of Bs and autosome centromeric heterochromatic regions of the yellow-necked mouse (Apodemus flavicollis) we obtained DNA probes for further two-dimensional (2D)- and three-dimensional (3D)- fluorescence in situ hybridization (FISH) studies. Simultaneous in situ hybridization of obtained here B-specific DNA probes and autosomal C-positive pericentromeric region-specific probes further corroborated the previously stated hypothesis about the pseudoautosomal origin of the additional chromosomes of this species. Analysis of the spatial organization of the Bs demonstrated the peripheral location of B-specific chromatin within the interphase nucleus and feasible contact with the nuclear envelope (similarly to pericentromeric regions of autosomes and sex chromosomes). It is assumed that such interaction is essential for the regulation of nuclear architecture. It also points out that Bs may follow the same mechanism as sex chromosomes to avoid a meiotic checkpoint.

Biosurveillance of Selected Pathogens with Zoonotic Potential in a Zoo.

Monitoring of infectious diseases is one of the most important pillars of preventive medicine in zoos. Screening for parasitic and bacterial infections is important to keep animals and equipment safe from pathogens that may pose a risk to animal and human health. Zoos usually contain many different animal species living in proximity with people and wild animals. As an epidemiological probe, 188 animals (122 mammals, 65 birds, and one reptile) from a zoo in Slovenia were examined for selected pathogens. Antibodies to Toxoplasma gondii and Neospora caninum were detected by ELISA in 38% (46/122) and 3% (4/122) of mammals, and in 0% (0/64) and 2% (1/57) of birds, respectively; the reptile (0/1) was negative. A statistically significant difference in T. gondii prevalence was found in Carnivora compared to Cetartiodactyla and primate antibodies to Encephalitozoon cuniculi were detected by IFAT in 44% (52/118) of mammals and 20% (11/56) of birds, respectively; the reptile (0/1) was negative. Herbivores had a higher chance of being infected with E. cuniculi compared to omnivores. Antibodies to Chlamydia abortus and Coxiella burnetii were not detected in any of the 74 tested zoo animals. The sera of 39 wild rodents found in the zoo were also examined; they were negative for all three parasites. The parasite T. gondii was detected by PCR in the tissue of two mute swans (Cygnus olor), three eastern house mice (Mus musculus), one yellow-necked field mouse (Apodemus flavicollis), and one striped field mouse (A. agrarius). Positive samples were genotyped by a single multiplex PCR assay using 15 microsatellite markers; one sample from a mute swan was characterized as type II. This micro-epidemiological study offers a better understanding of pathogens in zoo animals and an understanding of the role of zoos in biosurveillance.

Host-Dependent Clustering of Campylobacter Strains From Small Mammals in Finland.

Small mammals are known to carry Campylobacter spp.; however, little is known about the genotypes and their role in human infections. We studied intestinal content from small wild mammals collected in their natural habitats in Finland in 2010–2017, and in close proximity to 40 pig or cattle farms in 2017. The animals were trapped using traditional Finnish metal snap traps. Campylobacter spp. were isolated from the intestinal content using direct plating on mCCDA. A total of 19% of the captured wild animals (n = 577) and 41% of the pooled farm samples (n = 227) were positive for C. jejuni, which was the only Campylobacter species identified. The highest prevalence occurred in yellow-necked mice (Apodemus flavicollis) and bank voles (Myodes glareolus) which carried Campylobacter spp. in 66.3 and 63.9% of the farm samples and 41.5 and 24.4% of individual animals trapped from natural habitats, respectively. Interestingly, all house mouse (Mus musculus) and shrew (Sorex spp.) samples were negative for Campylobacter spp. C. jejuni isolates (n = 145) were further characterized by whole-genome sequencing. Core genome multilocus sequence typing (cgMLST) clustering showed that mouse and vole strains were separated from the rest of the C. jejuni population (636 and 671 allelic differences, 94 and 99% of core loci, respectively). Very little or no alleles were shared with C. jejuni genomes described earlier from livestock or human isolates. FastANI results further indicated that C. jejuni strains from voles are likely to represent a new previously undescribed species or subspecies of Campylobacter. Core-genome phylogeny showed that there was no difference between isolates originating from the farm and wild captured animals. Instead, the phylogeny followed the host species-association. There was some evidence (one strain each) of livestock-associated C. jejuni occurring in a farm-caught A. flavicollis and a brown rat (Rattus norvegicus), indicating that although small mammals may not be the original reservoir of Campylobacter colonizing livestock, they may sporadically carry C. jejuni strains occurring mainly in livestock and be associated with disease in humans.

Assessment of mouse rodents’ dose from the CHNPP contaminated territories

The main feature of the nearest 5-km zone of the Chernobyl nuclear power plant is the maximum concentration of fuel fallouts due to the accident in 1986. It is a unique testing ground for radiobiological research in the natural habitat of animals. At present, the background radiation level in the 5-km zone of the Chernobyl nuclear power plant fluctuates from 0.1 to 20 μSv/h. Besides, electrons from the decay of 90Sr and 137Cs add a significant contribution to the radiation background. Even though a large amount of experimental data on dose loads on the fauna of affected areas has been accumulated to date, the results obtained do not give an unambiguous idea of the dose dependences of radiobiological effects in natural ecosystems. In this work, we studied the total dose of irradiation of two murine rodents species: the bank vole (Clethrionomys glareolus) and the yellow-necked mouse (Apodemus flavicollis), living in territories of different levels of pollution near the destroyed power unit 4 of the Chernobyl nuclear power plant. We have assessed the density of radioactive contamination of the territory and study the isotopic composition of the fallout. Soil samples were taken to a depth of 30 cm, considering the depth of burrowing of mouse-like burrows is 10-15 cm. The 90Sr, 90Y, and 137Cs concentrations were measured using β- and γ-spectrometric methods for the selected soil samples. The 90Sr, 90Y, and 137Cs βactivity spectra were measured using a developed scintillation beta-spectrometer with a thin entrance window. Soil samples' gamma spectrometric studies were carried out using an anti-Compton device with an HPGe detector. The method for processing complex Xray and gamma-spectra in the energy range of 10-100 keV is developed. It takes into account the complexity of describing X-ray lines and providing a processing error of ≤1%. We calculated the murine rodents' radiation doses using the obtained data on the concentration of 90Sr, 90Y, and 137Cs activities in soil samples and animal bodies. The doses were calculated due to external irradiation with γ-quanta and electrons and internal irradiation with 137Cs and 90Sr electrons. For the first time, we obtained data on external electrons' contribution to the total dose of irradiation of murine rodents living in the contaminated territories of the 5-km zone of the Chernobyl nuclear power plant. Doses of internal irradiation and external γ-quanta are in good agreement with the data obtained for these territories earlier. It was found that the radiation dose is formed mainly due to external electrons for most rodents. Since many studies, including genetic and biochemical ones, are tied to the radiation dose, the correct account of the contribution of electrons to the radiation dose is, in many cases, critical.

What determines species composition and diversity of hypogeous fungi in the diet of small mammals? A comparison across mammal species, habitat types and seasons in Central European mountains

Interactions between diverse groups of organisms influence the functioning and diversity of ecosystems. Salient examples of such relationships are those among hypogeous fungi, trees and mycophagous mammals. To investigate the role of small mammals in transporting fungal spores within and outside forests as well as the influence of seasons, habitats and species on small mammal mycophagy, we set up a study in the Pieniny Mts, Western Carpathians (Southern Poland). The droppings of small mammals were collected during live trapping in July and September 2016 and 2017, to analyze richness, composition and frequency of fungal spores present in faeces. The yellow-necked mouse Apodemus flavicollis, the bank vole Myodes glareolus and the common vole Microtus arvalis were the most frequently trapped. Spores of 27 fungal taxa from 16 genera were retrieved from nearly 70% of faecal samples of rodents and shrews, with up to 9 spore taxa recorded per sample. Spore diversity in samples was higher in September than in July, although seasonal variation was year and animal dependent. The highest mean number of fungal taxa per sample was recorded for the bank vole and the yellow-necked mouse, with the former species showing a higher degree of mycophagy. The two rodents differed in the average frequencies of consumed fungi in samples, which could result from some degree of specialization in the choice of particular fungal species, as shown by the laboratory-based experiment. Within particular animal species, differences in the fungal diet were found between seasons. The spores of hypogeous fungi were transported from forests to meadows mostly by the yellow-necked mouse and, to a lesser extent, by the common vole. However, both, the diversity and the number of transported spores diminished with distance from the forest edge. • Rich and diverse assemblage of consumed hypogeous fungi in the Pieniny Mts. • Consumption of hypogeous fungi influenced by year, season, animal species and habitat. • Proves for a differential consumption of hypogeous fungi by rodent species. • Fungi are transported through the forest-meadow ecotone to the non-forest environments. • Yellow-necked mouse most effective in transporting fungal spores both in forests and in open areas.

Small mammal assemblage in beaver-modified habitats

One of the less studied positive interactions among organisms is facilitation. Facilitation may have significant impact on diversity of species especially in low productive environments. We studied the effects of well-known facilitator and ecosystem engineer, the North American beaver (Castor canadensis), on small mammal assemblages in the boreal zone. The small mammals, namely voles, mice, and shrews, were trapped over 2 years in ten beaver-modified habitats and in ten control sites. Contrary to our expectations, we did not observe any differences between species or individual numbers between beaver-modified and control sites. However, there were differences in species composition between sites; grass-eating field voles (Microtus agrestis) and invertebrate-eating shrews (Sorex araneus, Neomys fodiens) tended to be more common in beaver sites while forest-dwelling wood lemmings (Myopus schisticolor) and yellow-necked mice (Apodemus flavicollis) were only captured in control sites. The most common species in both habitats was the bank vole (Myodes glareolus), which is a generalist in its habitat requirements. The bank vole’s population structures were similar between the two habitat types. The actions of beavers in water bodies within boreal forests seem to have no effect on the small mammal diversity and their numbers at the regional scale but may have positive effect on them at the larger landscape level as beavers are increasing the overall habitat diversity in the landscape.

Spatial behaviour of yellow-necked wood mouse Apodemus flavicollis in two sub-Mediterranean oak coppice stands

Strong mutual relationships exist between rodents and ecosystems. By modifying the structure and functioning of ecosystems, human activity can affect rodent behaviour and ecology. The yellow-necked mouse Apodemus flavicollis is widespread in Europe, and its spatial ecology has been studied in various habitats, but studies are lacking for Mediterranean forests often altered by forest management practices. We investigated the spatial behaviour of A. flavicollis in a sub-Mediterranean deciduous oak forest of central Italy subject to forest management. We radio-tracked 27 individuals in two different coppice stands, i.e. a recently cut area and a high forest, differing in terms of species-specific habitat quality and rodent population density. We analysed the size of home ranges in relation to habitat type and sex. Our results revealed that home range and core area size did not differ between habitat types or sexes. The spatial behaviour of A. flavicollis thus did not appear to be influenced by population density and habitat quality. The lack of sex-related differences confirms the current knowledge on the species’ spatial ecology. Our findings provide the first useful information on the spatial behaviour of A. flavicollis in sub-Mediterranean deciduous oak forests, whose ecological processes may be markedly influenced by this key species at several trophic levels.

Relatives of rubella virus in diverse mammals.

We describe the first known relatives of rubella virus (Matonaviridae: Rubivirus)1 in Africa and Europe. Ruhugu virus, the closest relative of rubella virus, was found in apparently healthy cyclops leaf-nosed bats (Hipposideros cyclops) in Uganda. Rustrela virus, outgroup to the rubella/ruhugu clade of viruses, was found in acutely encephalitic placental and marsupial animals at a zoo in Germany and in wild yellow-necked field mice (Apodemus flavicollis) at and near the zoo. Ruhugu and rustrela viruses share an identical genomic architecture with rubella virus2,3. Amino acid sequences of rubella, ruhugu, and rustrela viruses are moderately to highly conserved within 4 putative B-cell epitopes in the fusion (EI) protein and, in the case of rubella and ruhugu viruses, within two putative T-cell epitopes in the capsid protein4–6. Modeling of E1 homotrimers in the post-fusion state predicts similar host-cell membrane fusion capacity for ruhugu and rubella viruses5. Together, these findings suggest show that some members of the Matonaviridae can cross wide host species barriers and that rubella virus likely had a zoonotic origin. Our findings raise concerns about future zoonotic transmission of rubella-like viruses but open doors for heretofore impossible comparative studies and novel animal models of rubella and congenital rubella syndrome.

Salmonella and Antimicrobial Resistance in Wild Rodents-True or False Threat?

Transmission of pathogenic and resistant bacteria from wildlife to the bacterial gene pool in nature affects the ecosystem. Hence, we studied intestine content of five wild rodent species: the yellow-necked wood mouse (Apodemus flavicollis, n = 121), striped field mouse (Apodemus agrarius, n = 75), common vole (Microtus arvalis, n = 37), bank vole (Myodes glareolus, n = 3), and house mouse (Mus musculus, n = 1) to assess their potential role as an antimicrobial resistance (AMR) and Salmonella vector. The methods adopted from official AMR monitoring of slaughtered animals were applied and supplemented with colistin resistance screening. Whole-genome sequencing of obtained bacteria elucidated their epidemiological relationships and zoonotic potential. The study revealed no indications of public health relevance of wild rodents from the sampled area in Salmonella spread and their limited role in AMR dissemination. Of 263 recovered E. coli, the vast majority was pan-susceptible, and as few as 5 E. coli showed any resistance. In four colistin-resistant strains neither the known mcr genes nor known mutations in pmr genes were found. One of these strains was tetracycline-resistant due to tet(B). High diversity of virulence factors (n = 43) noted in tested strains including ibeA, cdtB, air, eilA, astA, vat, pic reported in clinically relevant types of enteric E. coli indicate that rodents may be involved in the ecological cycle of these bacteria. Most of the strains represented unique sequence types and ST10805, ST10806, ST10810, ST10824 were revealed for the first time, showing genomic heterogeneity of the strains. The study broadened the knowledge on phylogenetic diversity and structure of the E. coli population in wild rodents.

Climate change has cascading effects on tree masting and the breeding performance of a forest songbird in a primeval forest

Forest habitats change significantly under the influence of global warming. It is important to predict the effects of these changes, especially in primeval forests which currently represent a small percentage of temperate forests. Such changes often manifest themselves in an acceleration of the frequency of mass seeding of trees, which causes cascading effects in various organisms. We evaluated changes in: tree masts (oak Quercus robur and hornbeam Carpinus betulus), rodent abundance (yellow-necked mouse Apodemus flavicollis), folivorous caterpillar abundance (winter moth Operophtera brumata), and the breeding success of a cavity-nesting songbird (collared flycatcher Ficedula albicollis) in over a 30-year period in the Białowieża Forest (E Poland). We also analysed temperature, precipitation and snow cover to determine the effects of weather on each trophic level. Previous studies have exposed the indirect effect of tree masting on songbirds breeding in open nests. Our study uniquely highlights the relationships between trees, rodents, caterpillars, and a cavity-nesting bird. Precipitation was positively correlated with the fructification of trees, abundance of caterpillars, and the breeding losses of flycatchers (in July, August, October in the previous year, in May in the current year, respectively). We found that along with the changing climate, the frequency of mast years of oak increased, which caused an increasing frequency of rodent outbreaks. The abundance of mice was positively correlated with the predation on flycatcher broods (current year) and negatively - with the abundance of caterpillars (following year). We predict that current global trends in climate change will have a negative impact on the flycatcher due to the cascading effects from the above species. Bearing in mind that F. albicollis is one of the most numerous bird species, it can be assumed that more frequent masting will result in substantial changes in the entire bird assemblage, and presumably also other groups of animals.

Population increase and synurbization of the yellow-necked mouse Apodemus flavicollis in some wooded areas of Warsaw agglomeration, Poland, in the years 1983\u20132018

Studies on the contribution of the yellow-necked mouse Apodemus flavicollis and of other vertebrates to the diet of the tawny owl Strix aluco were carried out in Warsaw (central Poland) in the years 1983–2018. The frequency of the yellow-necked mouse in owl pellets increased at the break of the 20th and 21st centuries, particularly in some woodlands in the peri-urban area of the agglomeration. In the second half of the first decade of the twenty-first century, this mouse species colonised a park in the city centre. The yellow-necked mouse may become an important competitor for the synurbic population of the striped field mouse Apodemus agrarius.

Lack of Evidence on the Susceptibility of Ticks and Wild Rodent Species to PCV3 Infection.

Porcine circovirus 3 (PCV3) is an emerging virus, first detected in 2016 and widespread in the swine industry. Although not considered a primary pathogen, PCV3 is potentially linked to several clinical conditions that threaten swine farming. Wild boars are considered the main reservoir species for PCV3 infection in the wild, but recent detection in roe deer, chamois and associated ticks has complicated our understanding of its epidemiology. Much emphasis has been placed on ticks, as competent vectors, and wild rodents, which typically feed immature tick stages. The aim of this study was to clarify whether wild rodent species and associated ticks are susceptible to PCV3 infection and involved in its spread. Wild small mammals’ serum samples and hosted ticks were, therefore, collected from areas where no wild boars were present and tested by PCR, targeting the PCV3 rep gene. A total of 90 yellow-necked mice (Apodemus flavicollis), two wood mice (A. sylvaticus), 26 bank voles (Myodes glareolus) and 262 Ixodes spp. ticks were investigated. PCV3 DNA was not detected in serum or in tick samples. These findings support the hypothesis that the investigated species do not have an actual role as PCV3 reservoirs. Further studies would be necessary to state whether these species, or others that we did not test, are involved in PCV3 infection spread—in particular when susceptible species share the same habitat.

Spatial and Temporal Evolutionary Patterns in Puumala Orthohantavirus (PUUV) S Segment.

The S segment of bank vole (Clethrionomys glareolus)-associated Puumala orthohantavirus (PUUV) contains two overlapping open reading frames coding for the nucleocapsid (N) and a non-structural (NSs) protein. To identify the influence of bank vole population dynamics on PUUV S segment sequence evolution and test for spillover infections in sympatric rodent species, during 2010–2014, 883 bank voles, 357 yellow-necked mice (Apodemus flavicollis), 62 wood mice (A. sylvaticus), 149 common voles (Microtus arvalis) and 8 field voles (M. agrestis) were collected in Baden-Wuerttemberg and North Rhine-Westphalia, Germany. In total, 27.9% and 22.3% of bank voles were positive for PUUV-reactive antibodies and PUUV-specific RNA, respectively. One of eight field voles was PUUV RNA-positive, indicating a spillover infection, but none of the other species showed evidence of PUUV infection. Phylogenetic and isolation-by-distance analyses demonstrated a spatial clustering of PUUV S segment sequences. In the hantavirus outbreak years 2010 and 2012, PUUV RNA prevalence was higher in our study regions compared to non-outbreak years 2011, 2013 and 2014. NSs amino acid and nucleotide sequence types showed temporal and/or local variation, whereas the N protein was highly conserved in the NSs overlapping region and, to a lower rate, in the N alone coding part.