Wild-collected Strains Research Articles

On the independence of barrage formation and heterokaryon incompatibility in Neurospora crassa

A barrage is a line or zone of demarcation that may develop at the interface where genetically different fungi meet. Barrage formation represents a type of nonself recognition that has often been attributed to the heterokaryon incompatibility system, which limits the co-occurrence of genetically different nuclei in the same cytoplasm during the asexual phase of the life cycle. While the genetic basis of the heterokaryon incompatibility system is well characterized in Neurospora crassa, barrage formation has not been thoroughly investigated. In addition to the previously described Standard Mating Reaction barrage, we identified at least three types of barrage in N. crassa; dark line, clear zone, and raised aggregate of hyphae. Barrage formation in N. crassa was evident only when paired mycelia were genetically different and only when confrontations were carried out on low nutrient growth media. Barrages were observed to occur in some cases between strains that were identical at all major heterokaryon incompatibility ( het) loci and the mating-type locus, mat, which acts as a heterokaryon incompatibility locus during the vegetative phase of N. crassa. We also found examples where barrages did not form between strains that had genetic differences at het-6, het-c, and/or mat. Taken together, these results suggest that the genetic control of barrage formation in N. crassa can operate independently from that of heterokaryon incompatibility and mating type. Surprisingly, barrages were not observed to form when wild-collected strains of N. crassa were paired. However, an increase in the frequency of pairings that produced barrages was observed among strains obtained by back-crossing wild strains to laboratory strains, or through successive rounds of inbreeding of wild-derived strains, suggesting the presence in wild strains of genes that suppress barrage.

Preliminary investigation of the circadian rhythms of wild-collected Neurospora strains.

A medium that allows for measurement of circadian rhythms in wild-collected strains of Neurospora is reported. Preliminary results with N. intermedia strains from four different latitudes suggest natural variation in clock-affecting loci.

Cytology of recessive sexual-phase mutants from wild strains of Neurospora crassa.

Wild-collected strains of Neurospora crassa harbor recessive mutations that are expressed in the sexual phase when homozygous. Thirty-two representative mutants that produced barren perithecia were examined cytologically. Six of these mutants failed to form asci. Of the remaining 26, chromosome pairing was disturbed in 12 and meiosis was disturbed at pachytene or diplotene in 5. Seven mutants showed normal meiosis I but then diverged from the normal sequence, and two showed perithecial beak abnormalities. In many mutants, ascus development and nuclear divisions continued after the initial defect, albeit abnormally. Nuclear divisions were often delayed, essentially uncoupling them from other ascus events such as the formation of enlarged spindle pole body plaques, ascospore wall membranes, and spore delimitation. All 32 mutants were recessive and none showed obvious morphological abnormalities during vegetative growth. This phenotype contrasts sharply with that of numerous laboratory-induced ascus mutants, which are frequently expressed pleiotropically in the vegetative phase and several are dominant in the sexual phase.

The basis of decreased recombination in certain outcrosses of Neurospora crassa.

Crossing over in a multiply marked segment of linkage group I was conspicuously reduced in outcrosses between a marked laboratory strain and each of six unrelated wild-collected strains, compared with crosses between inbred laboratory strains. The marked chromosome segment was transferred intact from the inbred strain to one of the wild-collected strains by seven recurrent backcrosses, and conversely, the corresponding segment of the wild strain was transferred to the inbred background by backcrossing to the multiply marked laboratory strain. Recombination was then monitored in crosses from parents having the marked and unmarked chromosome segments from the same or from unrelated sources. Meiotic crossing-over in the marked segment remained low in crosses between parents that were dissimilar with respect to genetic background, but crossing over was restored to a high level when the genetic background of both parents was that of the inbred laboratory strain, regardless of the source of the marked segments. Reduced recombination in outcrosses was therefore not due to heterologies in the marked segment but must be attributed to modifiers that are unlinked or distant from the monitored region.

Heterokaryon self-incompatibility in Gibberella fujikuroi ( Fusarium moniliforme)

Some isolates of Gibberella fujikuroi were unable to form a heterokaryon when complementary mutants were paired. The basis of this heterokaryon self-incompatibility (HSI) phenotype in two wild-collected strains was examined. The structural basis of HSI was determined microscopically by counting hyphal fusions. The HSI strains averaged 0·2 and 1·1 hyphal fusions per mm2 compared with 6·9 and 8·1 fusions per mm2 for heterokaryon self-compatible (HSC) strains (which form heterokaryons normally). The physiological basis of HSI was examined by observing heterokaryon formation by HSC and HSI strains on media containing compounds known to alter hyphal branching and/or hyphal fusion in other fungi. None of the compounds tested altered the ability of either the HSC or the HSI strains to form heterokaryons. Meiotic progeny of a cross between an HSC strain and an HSI strain segregated 1:1 for the HSI phenotype, suggesting that this trait is under the control of a single nuclear gene. Female infertility co-segregated with HSI among the cross progeny. We concluded that the HSI phenotype results from a mutation at a nuclear gene designated hsil that governs the ability of the fungal hyphae to anastomose.

Ribosomal DNA inheritance and recombination in Neurospora crassa.

The genetic segregation of ribosomal DNA (rDNA) in Neurospora crassa was analyzed by exploiting restriction fragment length polymorphisms in the nontranscribed spacer (NTS) sequences of nine laboratory wild-type strains and wild-collected strains. In an analysis of random spore progeny from seven crosses, and of ordered tetrads from two of those crosses the rDNA was shown to be inherited in a simple, stable Mendelian fashion, exhibiting an approximately 1:1 ratio of the two parental rDNA types. No meiotic recombinants were detected among the progeny, indicating that non-sister-chromatid crossing over is highly suppressed in the rDNA region. The basis for this suppression of meiotic recombination is not known.

Organization of the ribosomal ribonucleic acid genes in various wild-type strains and wild-collected strains of Neurospora.

The organization of the ribosomal DNA (rDNA) repeat unit in the standard wild-type strain of Neurospora crassa, 74-OR23-1A, and in 30 other wild-type strains and wild-collected strains of N. crassa, . tetrasperma, N. sitophila, N. intermedia, and N. discreta isolated from nature, was investigated by restriction enzyme digestion of genomic DNA, and probing of the Southern-blotted DNA fragments with specific cloned pieces of the rDNA unit from 74-OR23-1A. The size of the rDNA unit in 74-OR23-1A was shown to be 9.20 kilobase pairs (kb) from blotting data, and the average for all strains was 9.11 + 0.21 kb; standard error = 0.038; coefficient of variation (C.V.) = 2.34%. These data indicate that the rDNA repeat unit size has been highly conserved among the Neurospora strains investigated. However, while all strains have a conserved HindIII site near the 5' end of the 25 S rDNA coding sequence, a polymorphism in the number and/or position of HindIII sites in the nontranscribed spacer region was found between strains. The 74-OR23-1A strain has two HindIII sites in the spacer, while others have from 0 to at least 3. This restriction site polymorphism is strain-specific and not species-specific. It was confirmed for some strains by restriction analysis of clones containing most of the rDNA repeat unit. The current restriction map of the 74-OR23-1A rDNA repeat unit is presented.