Aphia Research Articles

Valorization of fish from the Adriatic Sea: nutritional properties and shelf life prolongation of Aphia minuta through essential oils.

This study aimed to exploit the nutritional and microbiological qualities of Aphia minuta, which are still largely unknown; they are collected from Golfo di Manfredonia (Adriatic Sea). Chemical composition, fatty acids, and amino acid profiles were evaluated during winter, spring, and summer (two samples each season). The protein content was highest in spring, while no significant differences were found for fat and ash contents across all sampling periods. Fatty acid profile analyses revealed that monounsaturated and polyunsaturated fatty acids were affected by the sampling season. Notably, the value of n-3 polyunsaturated fatty acids increased in spring and summer compared to the winter season. The highest content of essential amino acids was measured during the spring and summer seasons (P < 0.01), with leucine and lysine being the most dominant. Regardless of the fishing season, from a nutritional point of view, this species is an excellent source of bioactive compounds. This study also focused on the microbiological quality and shelf life of Aphia minuta. Initially, the bioactivity of three different essential oils (thymol, lemon, and citrus extract) was tested on Pseudomonas fluorescens, Staphylococcus aureus, and Escherichia coli. These essential oils were then combined with various packaging materials (conventional, maize starch, and polylactate) and packaging atmosphere (air, vacuum, and a modified atmosphere with reduced oxygen content). The results indicated that combining citrus extract with vacuum packaging significantly reduced the psychrotrophic viable count to undetectable levels after 7 days. This study suggests some important considerations for exploiting and expanding the market of the Aphia minuta.

Reproductive traits exhibited by the paedomorphic gobies exploited in the Majorcan transparent goby fishery (western Mediterranean) and their management implications

An important small-scale fishery in Majorca targets three similar goby species: Aphia minuta, Pseudaphia ferreri and Crystallogobius linearis. Histological examination of the gonads of these species sampled from landings during the fishing season revealed characteristic reproductive traits that could be defined as abbreviate iteroparity. The transparent goby (Aphia minuta) and Ferrer’s goby (Pseudaphia ferreri) showed batch abbreviate iteroparity as a reproductive strategy, whereas the crystal goby (Crystallogobius linearis) showed total abbreviate iteroparity. Despite their short lifespans, all of them have a spawning season whose duration is longer than the legal fishing season. Additionally, all of them maintain a standing stock of primary growth oocytes in their gonads, indicating more than one spawning season in their lifespan. These reproductive features partially offset their special sensitivity to potential overexploitation and environmental changes but also suggest that the fishery needs special management to avoid breaking the balance between sustainability and fishing effort. The results of size at maturity and potential annual fecundity in the three species of the fishery are also reported and discussed.

Antimicrobial resistance profile of Escherichia coli isolated from poultry litter

Antimicrobial resistance is a threat to animal and human health. As a commensal and zoonotic bacterium, Escherichia coli has the potential to be a pathogenic source of antimicrobial resistance. The purpose of this study aimed to investigate the antimicrobial resistance profile of E. coli isolated from litter collected from pens in a broiler chicken experiment. E. coli was isolated from litter samples (n=68 isolates) of 16 pens housing broilers to d 53 of age. Resistance to 10 antimicrobials was observed by disc diffusion. The presence of 23 antimicrobial and heavy metal resistance genes, O serogroups, and avian pathogenic E. coli (APEC-like) minimal predictor genes were identified through PCR. E. coli isolates presented the greatest resistance to cephalothin (54.4%), tetracycline (27.9%), streptomycin (29.4%), ampicillin (20.6%), colistin (13.2%), sulphonamides (8.8%), and imipenem (1.5%). Multidrug resistance to at least 3 antimicrobials was observed in 22.1% of isolates. The identified O-types of the E. coli isolates were O15, O75, O78, and O91. There was a greater likelihood that the genes groEL, aph(3)IA, silP, sull, aadA, qacEdelta1, iroN, ompTp, and hlyF were present in isolates that exhibited ampicillin resistance (P ≤ 0.05). There was a greater likelihood that the groEL gene was present in isolates resistant to ampicillin, colistin, tetracycline, sulphonamides, or cephalothin (P ≤ 0.05). Further characterizing E. coli antimicrobial resistance is essential and aids in developing effective solutions, thereby furthering the One Health objective.

The diversity in antimicrobial resistance of MDR Enterobacteriaceae among Chinese broiler and laying farms and two mcr-1 positive plasmids revealed their resistance-transmission risk.

This research aimed to investigate the microbial composition and diversity of antimicrobial resistance genes (ARGs) found in Chinese broiler and layer family poultry farms. We focused on the differences in resistance phenotypes and genotypes of multidrug-resistant Enterobacteriaceae (MDRE) isolated from the two farming environments and the existence and transmissibility of colistin resistance gene mcr-1. Metagenomic analysis showed that Firmicutes and Bacteroides were the dominant bacteria in broiler and layer farms. Many aminoglycoside and tetracycline resistance genes were accumulated in these environments, and their absolute abundance was higher in broiler than in layer farms. A total of 526 MDRE were isolated with a similar distribution in both farms. The results of the K-B test showed that the resistance rate to seven antimicrobials including polymyxin B and meropenem in broiler poultry farms was significantly higher than that in layer poultry farms (P ≤ 0.05). PCR screening results revealed that the detection rates of mcr-1, aph(3’)Ia, aadA2, blaoxa–1, blaCTX–M, fosB, qnrD, sul1, tetA, and catA1 in broiler source MDRE were significantly higher than those in layers (P ≤0.05). A chimeric plasmid p20432-mcr which carried the novel integron In1866 was isolated from broiler source MDRE. The high frequency of conjugation (10–1 to 10–3) and a wide range of hosts made p20432-mcr likely to play an essential role in the high detection rate of mcr-1, aph(3’)-Ia, and aadA2 in broiler farms. These findings will help optimize disinfection and improve antimicrobial-resistant bacteria surveillance programs in poultry farms, especially broilers.

Genetic Diversity, Antimicrobial Resistance, and Virulence Factors of Enterococcus faecalis Isolates Obtained from Stool Samples of Hospitalized Patients

Background: Enterococcus faecalis rapidly develops resistance to different antibiotics, thereby resulting in serious nosocomial infections associated with high mortality rates and different problems in the healthcare systems. Objectives: This study aimed to analyze the genetic diversity, antimicrobial resistance, and virulence factors of E. faecalis isolates obtained from the stool samples of patients in a hospital in the center of Iran. Methods: In this cross-sectional descriptive-analytical study, 108 stool samples were collected from September 2019 to February 2020 from 108 patients hospitalized in a hospital in the center of Iran. Enterococcus faecalis isolates were detected using the ddlE gene detection technique, and antimicrobial resistance testing was performed using the disc agar diffusion method. Moreover, polymerase chain reaction was used to detect antimicrobial resistance genes and virulence factors. Genetic diversity was also analyzed by enterobacterial repetitive intergenic consensus using PCR. The BioNumerics software was used to construct a dendrogram. Results: Of 108 isolates, 50 samples were E. faecalis (46.2%). The prevalence of multidrug resistance among E. faecalis isolates was 62%, and most isolates were resistant to antibiotics tetracycline (70%), erythromycin (68%), and rifampin (60%). Among the E. faecalis isolates, the most prevalent antimicrobial resistance genes were ermB (96%), aph (2′′) Ia (66%), aac(6′)-Ie (40%), and ermC (30%), and the most prevalent virulence genes were gelE (78%), asa1 (74%), and esp (74%). The genetic diversity analysis showed 25 ERIC types in two major clusters (ie, clusters H and J) and eight minor clusters (ie, clusters A-G and I). There was no significant difference between clusters H and J in terms of antimicrobial resistance and resistance genes (P &gt; 0.05). In contrast, the prevalence of the asa1 gene was significantly higher in cluster J than in cluster H (P &lt; 0.05). Conclusions: This study showed the high prevalence of multidrug resistance, and high heterogeneity among the E. faecalis isolates obtained from the stool samples of hospitalized patients.

Türkiye’nin Batı Karadeniz Kıyılarından 14 Balık Türü Için Boy-Ağırlık İlişkisi

In this study, the length-weight relationship (LWR) of 14 fish species including Merlangius merlangus (Linnaeus, 1758),Trachurus trachurus (Linnaeus, 1758), Mullus barbatus Linnaeus, 1758, Gobius niger Linnaeus, 1758, Scorpaena porcus (Linnaeus, 1758), Arnoglossus kessleri Schmidt, 1915, Uranoscopus scaber Linnaeus, 1758, Serranus hepatus (Linnaeus, 1758), Sygnathus thyphle Linnaeus, 1758, Aphia minuta (Risso, 1810), Trachinus draco Linnaeus, 1758, Parablennius tentacularis (Brünnich, 1768), Illionymus risso Lesueur 1814, Entomacrodus marmoratus (Bennett, 1828) caught from the western Black Sea coasts of Turkey was investigated. The sampling was carried out seasonally in 2017-2018 using beam trawling nets with 2 m aperture. The depths of the sampling points varied from 10 m to 30 m. The minimum and maximum lengths and weights, length-weight relationships, parameters of a and b, ± 95% CI of b, r2, growth type (isometric or allometric) of samples, and statistical analyses of the relationship were determined. Estimates for parameter b of the length–weight relationship ranged between 2.58 and 3.586.

The Urinary Resistome of Clinically Healthy Companion Dogs: Potential One Health Implications.

An interdisciplinary approach to antimicrobial resistance (AMR) is essential to effectively address what is projected to soon become a public health disaster. Veterinary medicine accounts for a majority of antimicrobial use, and mainly in support of industrial food animal production (IFAP), which has significant exposure implications for human and nonhuman animals. Companion dogs live in close proximity to humans and share environmental exposures, including food sources. This study aimed to elucidate the AMR-gene presence in microorganisms recovered from urine from clinically healthy dogs to highlight public health considerations in the context of a species-spanning framework. Urine was collected through cystocentesis from 50 companion dogs in Southern California, and microbial DNA was analyzed using next-generation sequencing. Thirteen AMR genes in urine from 48% of the dogs {n=24} were detected. The most common AMR genes were aph(3′)Ia, and ermB, which confer resistance to aminoglycosides and MLS (macrolides, lincosamides, streptogramins) antibiotics, respectively. Antibiotic-resistance profiles based on the AMR genes detected, and the intrinsic resistance profiles of bacterial species, were inferred in 24% of the samples {n=12} for 57 species, with most belonging to Streptococcus, Staphylococcus, and Corynebacterium genera. The presence of AMR genes that confer resistance to medically important antibiotics suggests that dogs may serve as reservoirs of clinically relevant resistomes, which is likely rooted in excessive IFAP antimicrobial use.

COIBar-RFLP Molecular Strategy Discriminates Species and Unveils Commercial Frauds in Fishery Products.

The DNA analysis is the best approach to authenticate species in seafood products and to unveil frauds based on species substitution. In this study, a molecular strategy coupling Cytochrome Oxidase I (COI) DNA barcoding with the consolidated methodology of Restriction Fragment Length Polymorphisms (RFLPs), named COIBar-RFLP, was applied for searching pattern of restriction enzyme digestion, useful to discriminate seven different fish species (juveniles of Engraulis encrasicolus and Sardina pilchardus sold in Italy as “bianchetto” and Aphia minuta sold as “rossetto”; icefish Neosalanx tangkahkeii; European perch, Perca fluviatilis and the Nile Perch, Lates niloticus; striped catfish, Pangasianodon hypophthalmus). A total of 30 fresh and frozen samples were processed for DNA barcoding, analyzed against a barcode library of COI sequences retrieved from GenBank, and validated for COIBar–RFLP analysis. Cases of misdescription were detected: 3 samples labeled as “bianchetto” were substituted by N. tangkahkeii (2 samples) and A. minuta (1 sample); 3 samples labeled as “persico reale” (P. fluviatilis) were substituted by L. niloticus and P. hypophthalmus. All species were simultaneously discriminated through the restriction pattern obtained with MspI enzyme. The results highlighted that the COIBar-RFLP could be an effective tool to authenticate fish in seafood products by responding to the emerging interest in molecular identification technologies.

Evaluation of three different methods for susceptibility testing of gentamicin in carbapenem resistant Enterobacterales.

Carbapenem-resistant Enterobacterales (CRE) have become a growing problem worldwide in recent years. Options for the treatment of CRE are limited and one of these options is gentamicin. For this reason, gentamicin susceptibility should be properly determined. In a recently reported study, it is recommended to review the results of automated systems for assessing gentamicin susceptibility in carbapenem-resistant isolates. In this study, we aimed to determine gentamicin susceptibility using three different methods and compare the methods. The study included 107 CRE isolates from different samples. Gentamicin susceptibility was determined using Vitek 2 Compact (bioMérieux, France), Microscan Walkaway Plus (Beckman Coulter, USA) automatic systems, and disk diffusion (DD) method. The broth microdilution method (BMD) was used as reference method. Minor, major, and very major errors and categorical agreement rates were determined for each method. Aminoglycoside-modifying enzymes (aac(6')Ib and aph(2″)Ia) were assayed in discrepant isolates. According to BMD results, 90.7%, 1,8 %, and 7.5 % of the isolates were determined as susceptible, intermediate, and resistant to gentamicin, respectively. Compared to the results of the BMD for detecting gentamicin susceptibility, disk diffusion method showed the highest categorical agreement (98.1%), and Vitek 2 Compact showed the lowest categorical agreement (90.6%). The very major error rates were determined 7.5%, 0.9%, and 0.9% for Vitek 2 Compact, Microscan Walkaway Plus, and DD method, respectively. In addition, aac(6')Ib and aph(2″)Ia genes were detected in 8 discrepant isolates. For gentamicin susceptibility, the DD showed the most compatible results. The DD can be used as a reliable method for determining gentamicin susceptibility. Compatibility of automated systems with BMD was acceptable, although lower than DD. The discrepancies detected in the Vitek 2 Compact results could be due to the presence of aac(6')Ib and/or aph(2″)Ia aminoglycoside-modifying enzymes.

Validating the growth increment periodicity in the otoliths of three small progenetic gobies

We determined the efficacy of marking the otoliths of three small-sized progenetic gobies to validate their increment periodicity. These small gobies have high mortalities and rearing difficulties, making direct validation difficult. The otoliths were marked by immersing the fish in a bath of alizarin red S. The fishes were euthanatized and the number of increments in their otoliths laid down after the fluorescent mark were counted and compared with the number of elapsed days. The results validated the daily periodicity of Aphia minuta and Pseudaphya ferreri. The high mortality hindered the validation of Crystallogobius linearis.

Evidence on Otolith Structure and some Ecological Features of Three Small Foraging Species along the Southern Black Sea Coast

In this study, we aimed to describe otoliths to provide information about the stomach contents of three small foraging species and to contribute to the currently limited biological and ecological evidence about the species. Seasonal experimental bottom trawl surveys were conducted along the shelf areas of the Kızılırmak-Yeşilırmak and Melet Rivers to collect investigation materials which were abundant in the bycatch composition of the target catch. The information about body size measurements, abundance values, depth, season, and locality of samplings was recorded for further evaluations. Otolith shapes were defined as discoidal to ovate for the Aphia minuta, discoidal for the Pomatoschistus marmoratus, and square for the Arnoglossus kessleri. The mean length and weight values of the Aphia minuta, which was abundant along shallow coastal waters (0-30 m), were significantly different between localities and sampling season, but no difference was found between depth ranges. Pomatoschistus marmoratus, whose distribution varied significantly between depths and seasons had dense distributions along with the depth range of 30-60 m. Arnoglossus kessleri was most abundant along with the depth range of 0-30 m and had no samples in depths of over 60 m. It was found that the mean values of length and weight of this species were only significantly different among seasons but similar over the depth ranges and localities.

Overexpression of Efflux Pumps Mediate Pan Resistance of Klebsiella pneumoniae Sequence Type 11.

A clinically isolated pan-resistant Klebsiella pneumoniae strain (ST11), KPN142 was subjected to whole-genome sequencing. Genomic sequence of KPN142 showed that limited antibiotic resistances (β-lactams [blashv-11], sulfonamides [sul1 and dfrA22], bacitracin [bacA], tetracycline [tet34], aminoglycosides [ksgA, kdpE, aph(3)Ia, aac(3)III, and ant(3)Ia], and chloramphenicol [catA1]) were mediated by enzymes, and efflux pumps contributed most to pan resistance. Five types of multidrug resistance efflux pump families were identified, including the resistance nodulation division superfamily (AcrAB-TolC, AcrD, MdtABC, and KexD), the ATP-binding cascade superfamily (MacAB), the small multidrug resistance family (KpnEF), the multidrug and toxic compound extrusion family (KdeA), and the major facilitator superfamily (EmrAB). There was an AcrAB-TolC efflux pump system, and inhibitory regulatory gene acrR and ramR of system carried deletion mutation, which lead to overexpression of AcrAB-TolC efflux pump, and in turn plays key role in the pan resistance of KPN142. Moreover, we did not find mgrb, a suppressor in the expression of phoPQ, overexpression of which may confer the resistance of KPN142 to colistin B. In addition, K. pneumoniae KPN142 carries IS1, IS3, and IntI1, which means that KPN142 is able to transfer drug-resistance genes. Of note, we detected the overexpression of acrB, ramA, phoP, and phoQ by real-time quantitative reverse transcription-polymerase chain reaction, and carbonyl cyanide chlorophenylhydrazone was able to reverse the resistance patterns of K. pneumoniae KPN142. In conclusion, we consider that the overexpression of AcrAB-TolC efflux pump mediates the resistance to most common clinical antimicrobial agents, and the overexpression of phoPQ mediates the resistance to colistin B in K. pneumoniae KPN142.

LATE MIOCENE–EARLY PLIOCENE EVOLUTION OF MEDITERRANEAN GOBIES AND THEIR ENVIRONMENTAL AND BIOGEOGRAPHIC SIGNIFICANCE

The Lago Mare phase at the end of the Messinian Salinity Crisis (MSC) in the Mediterranean has long been known for the Paratethyan affinities of its biota. The taxonomic level of these affinities and their origin, however, is subject to divergent interpretations. Here, we have studied otoliths of the Gobioidei from late Miocene and early Pliocene deposits from Italy and Greece and revised earlier studies including time-equivalent data from Romania and NW Turkey. Nowadays, gobies constitute the most speciose marine fish family in Europe and the most diverse endemic family in the Ponto-Caspian region. Furthermore, they are highly adapted to nearshore shallow marine, brackish, and freshwater environments, which makes them excellent candidates to explore short-term connections of waterways of different nature. The normal marine late Tortonian and pre-evaporitic Messinian deposits of the studied Italian and Greek locations contained a rich and diverse goby assamblage, but species with Paratethyan affinities were very rare and possibly originated from connections during the early Serravallian (late Badenian) and early Messinian (early Meotian). A rare fauna from a paralic environment from Cessaniti, Calabria, similar to the mangrove environments found in the present-day Guinea coastal area, revealed two species of the family Eleotridae and no gobies with Paratethyan affinities. Cessaniti provides a unique opportunity to recognize the presence of this type of environmental context with a unique gobioid assemblage in the Neogene of Europe. The shallow-water brackish-influenced sediments of Strada degli Archi just below the MSC show an increasing influence of Paratethyan gobiid taxa (Proterorhinus yigitbasi, Zosterisessor exsul n. sp.), which are not present in time-equivalent normal marine environments, but have also been identified in the Dacic Basin of Romania. Sediments of the stage 3 ot the MSC, especially those that accumulated during the Lago Mare event, were dominated by a diverse goby assemblage with Paratethyan affinities, while indigenous Mediterranean goby taxa disappeared probably because of the lack of suitable conditions for neritic demersal stenohaline fishes, except for the nektonic Aphia minuta. The sediments of the stage 3 of the MSC also included in one particular location and level the unusual Enigmacottus socialis n. gen., n. sp., a putative member of the family Psychrolutidae of uncertain origin, which constitutes about 70% of all otoliths obtained from that interval in Italy. Beginning with the Zanclean, the goby assemblage of the Mediterranean shows an almost exclusively Atlantic-Mediterranean composition. A total of 15 new species are described, 12 in the family Gobiidae, two of the Eleotridae, and one putative Psychrolutidae. The new taxa are: Eleotris omuamuaensis n. sp., Eleotris tyrrhenicus n. sp., Lesueurigobius stazzanensis n. sp., Gobius peloponnesus n. sp., Proterorhinus cretensis n. sp., Zosterisessor exsul n. sp., Benthophilus aprutinus n. sp., Benthophilus labronicus n. sp., Caspiosoma lini n. sp., Caspiosoma paulisulcata n. sp., Thorogobius petilus n. sp., Buenia pisiformis n. sp., Hesperichthys gironeae n. sp., Knipowitschia etrusca n. sp., and Enigmacottus socialis n. gen. et n. sp.

Assessing relative post-release mortality for the transparent goby fishery: Environmental drivers and the utility of vitality metrics.

The target species (Aphia minuta and Pseudaphya ferreri) of the transparent goby fishery on Mallorca Island (Balearic Islands, western Mediterranean) are currently discarded when the maximum daily catch is exceeded or when the sorting process is unworkable. The mortality suffered by this discarded fraction remains unknown, although it may be important for resource management. Accordingly, the aims of this study were to (1) assess the environmental drivers of the relative post-release survival of the discarded target species and (2) test the correlations between post-release survival and two behavior-related variables (swimming speed and its increase after a stimulus, assessed via video recording). To do so, mortality of the target species from 47 hauls sampled under normal fishing boat operations was monitored when the gear was onboard and after a few hours. At the reference level (an average depth of 25.7 m and temperature of 15.7 ºC), the immediate survival was 99.9% (95% CI: 97.9 to 100%), but the estimated post-release survival decreased to 47.2% (33.8 to 65.8%). Relative post-release mortality doubled when the water temperature increased by 2.8 ºC or when the fishing depth increased up to 32 m. Furthermore, the swimming speed of the target species was significantly correlated with the estimated post-release survival; thus, this vitality metric may offer a promising strategy for more easily estimating post-release mortality in other fisheries.

Length-Weight Relationships and Condition Factors of 15 Fish Species from KizilirmakYesilirmak Shelf Area, the Southeastern Black Sea

Length-weight relationships of 15 fish species from Kizilirmak-Yesilirmak Shelf Area,&#x0D; Southeastern Black Sea were described. A total of 21.246 fish specimens were caught between&#x0D; 2009-2014 using bottom and pelagic trawl nets. Parameters of b estimated for these species varied&#x0D; between 2.82 and 3.49, and r&#x0D; 2 varied from 0.82 to 0.99. The lowest and the highest condition&#x0D; factors were estimated for Aphia minuta as 0.50±0.005 and Scophthalmus maximus as 1.68±0.014,&#x0D; respectively.

Genotyping and antimicrobial resistance in Escherichia coli from pig carcasses

ABSTRACT: The increasing antimicrobial resistance observed worldwide in bacteria isolated from human and animals is a matter of extreme concern and has led to the monitoring of antimicrobial resistance in pathogenic and commensal bacteria. The aim of this study was to evaluate the antimicrobial resistance profile of Escherichia coli isolated from pig carcasses and to assess the occurrence of relevant resistance genes. A total of 319 E. coli isolates were tested for antimicrobial susceptibility against different antimicrobial agents. Moreover, the presence of extended-spectrum β-lactamase (ESBL) and inducible ampC-β-lactamase producers was investigated. Eighteen multi-resistant strains were chosen for resistance gene detection and PFGE characterization. The study showed that resistance to antimicrobials is widespread in E. coli isolated from pig carcasses, since 86.2% of the strains were resistant to at least one antimicrobial and 71.5% displayed multi-resistance profiles. No ampC-producing isolates were detected and only one ESBL-producing E. coli was identified. Genes strA (n=15), floR (n=14), aac(3)IVa (n=13), tetB (n=13), sul2 (n=12), tetA (n=11), aph(3)Ia (n=8) and sul3 (n=5) were detected by PCR. PFGE analysis of these multi-resistant E. coli strains showed less than 80% similarity among them. We conclude that antimicrobial multi-resistant E. coli strains are common on pig carcasses and present highly diverse genotypes and resistance phenotypes and genotypes.

Significant genetic differentiation of Gobiopterus lacustris, a newly recorded transparent goby in China

In our recent survey, the transparent small Lacustrine goby, Gobiopterus lacustris had reported as the endemic species of Luzon, Philippines, was identified as an abundant species in mangroves of Leizhou Peninsula, China. Here, high diversity and significant differentiation of five sites of samples representing the west and east populations were revealed by mitochondrial DNA sequences. Five haplotypes of 56 cytochrome oxidase subunit I (Cox1) with the lengths of 623 base pairs (bp) have the high pairwise identity (>98.8%). Moreover, a total of 31 haplotypes for 129 partial D-loop regions were clustered into two clades corresponding to the east and west sampling sites. The strong population structure was confirmed (ΦST = 0.43017, p < .0001) with high haplotype diversity (h = 0.880 ± 0.017) and low nucleotide diversity (p=.00484). Moreover, both the mismatch distribution analysis and neutral test of D-loop revealed that the west group might experience a recent demographic expansion. Lastly, the isolation-with-migration analysis supported the expansion and indicated that the east–west split happened at approximately 7.1 kyr ago. Given the distribution and diversity, G. lacustris could be a good model for the study of the sea-level fluctuations and coast evolution of the South China Sea.

Balearic Islands boat seine fisheries: the transparent goby fishery an example of co-management

Abstract An economically important, small-scale fishery operates during the winter months in Mallorca. Using a special surrounding net that is hauled over the sand and gravel bottoms of bays at depths reaching 30 m, it primarily targets Aphia minuta and Pseudaphya ferreri, but other goby species and juveniles of the Pagellus spp are also caught. Similar fisheries are operated on the Spanish coast and in Italy. This fishery is run with specific licenses, equipment controls, and closed seasons (based on species availability). In cooperation with local fishermen, the administration has in recent years established a daily quota for sustaining the sales prices 22of the species caught. A management plan was set up in 2013 in accordance with European Union rules to ensure the sustainability of the fishery. Its sustainable quotas have been set at 30 kg/day/boat for A. minuta and 50 kg/day/boat for P. ferreri, and the by-catch cannot exceed 10% of the total catch. Landings are permitted in 11 fixed ports and only 35 boats can fish with the regulated nets from December 15 to April 30. A co-management committee was created with the participation of the public administration, fishermen’s associations, researchers, and certain non-governmental organizations. The co-management process was revised and fishermen’s opinions were obtained in a successful enquiry that was answered by the majority of the operating fleet, and their views on the management rules will be considered in future regulations. The co-management of the small-scale boat seine fishery in the Balearic Islands is thus an ongoing collaborative and communicative process in a local community that continues to evolve over time. Although the fishermen are represented by their port guilds, communication efforts are necessary in the near future to ensure the success of the co-management process.

The role of life-history traits, selective pressure and hydrographic boundaries in shaping the genetic structure of the transparent goby,Aphia minuta

The transparent goby (Aphia minuta) is a small progenetic goby that displays a short life cycle with early reproductive maturity and represents a valuable fishery resource harvested by artisanal fleets in most part of its distributional range. This study aimed to define the genetic variability in A. minuta at five sampling sites within the Mediterranean Sea and one in the Atlantic Ocean through the analysis of 11 nuclear microsatellite loci. The results revealed that several genetic diversity estimators (expected and observed heterozygosities, mean number of alleles and allelic richness) were lower in the Atlantic Ocean than in the Mediterranean Sea, suggesting the role of past or current demographic events in shaping this pattern. The genetic structure was investigated using both classical genetic differentiation descriptors and Bayesian approaches, and by defining the current and past migration rates. The results obtained revealed a pronounced genetic structure within the Mediterranean Sea and suggest a very low current migration rate. The pattern of historical migration suggests the possible role of hydrographic boundaries in shaping the genetic structure detected in this species. In addition, the identification of loci under selection suggests the possible implication of selective pressures that are acting on genes connected with the peculiar life cycle of this gobiid fish.

Marine fish diversity and habitat use along the western coast of the Black Sea

Event Abstract Back to Event Marine fish diversity and habitat use along the western coast of the Black Sea Viorel D. Gavril1, 2, 3* 1 Institutu of Biology, Bucharest, Romania 2 Oceanographic Research and Marine Environment Protection Society Oceanic-Club, Romania 3 University of Bucharest, Faculty of Geography, Romania Over the years the conditions of the Black Sea marine habitats have been modified due to anthropogenic impacts and climate change, and it is likely that the diversity of fish fauna changed as a result. This study provides new data regarding marine fish population diversity and habitat use along the western coast of the Black Sea. I recorded fish species and habitat data between 2011 and 2014 in two locations: Constanta, Romania and Shabla-Tyulenovo coast, Bulgaria, using fishing (only in Romania) and scuba visual transects (Romania and Bulgaria). During this period, we identified a number of 45 fish species, belonging to 14 orders and 30 families. Observations made while scuba diving were of great importance for this study, as 47% of the species were identified using this method. These species include Sciaena umbra, Salaria pavo, Coryphoblennius galerita, Callionymus pusillus, Aphia minuta, Ophidion rochei, Diplodus annularis, and Chelidonichthys lucerna. Five broad types of habitats were delimited for the species identified: pelagic, sandy bottoms, rocky bottoms, rocky habitats with Cystoseira sp. and man-made structures like breakwaters. Vertically, the delimitation was made above and below the 10 meter line based on due to the differences in temperature, light penetration and surface wave interference. I identified 34 species of fish in the Shabla-Tyulenovo area and 39 species in the Constanta area, of which 19 species preferred sandy bottoms, 21 rocky bottoms, 16 rocky habitats with Cystoseira sp., 19 man-made structures and 9 were pelagic. For 7 species habitat preferences could not be determined as a result of capture only by fishing. In conclusion, the scuba visual transects along with fishing methods provide a relevant image to the current state of the fish diversity along the western coast of the Black Sea. Acknowledgements I would like to acknowledge O.R.M.E.P.S. Oceanic-Club for supporting the costs for the participation to the XV European Congress of Ichthyology and providing logistic help during field work. This study was partially supported by the Romanian Academy, Institute of Biology, Bucharest Project 4 (RO1567-IBB04/2015). Keywords: Fishes, habitat use, Black Sea, Romania, SCUBA diving Conference: XV European Congress of Ichthyology, Porto, Portugal, 7 Sep - 11 Sep, 2015. Presentation Type: Oral Presentation Topic: Ecology, Conservation and Invasive Species Citation: Gavril VD (2015). Marine fish diversity and habitat use along the western coast of the Black Sea. Front. Mar. Sci. Conference Abstract: XV European Congress of Ichthyology. doi: 10.3389/conf.FMARS.2015.03.00177 Copyright: The abstracts in this collection have not been subject to any Frontiers peer review or checks, and are not endorsed by Frontiers. They are made available through the Frontiers publishing platform as a service to conference organizers and presenters. The copyright in the individual abstracts is owned by the author of each abstract or his/her employer unless otherwise stated. Each abstract, as well as the collection of abstracts, are published under a Creative Commons CC-BY 4.0 (attribution) licence (https://creativecommons.org/licenses/by/4.0/) and may thus be reproduced, translated, adapted and be the subject of derivative works provided the authors and Frontiers are attributed. For Frontiers’ terms and conditions please see https://www.frontiersin.org/legal/terms-and-conditions. Received: 30 Nov 2015; Published Online: 01 Dec 2015. * Correspondence: Mr. Viorel D Gavril, Institutu of Biology, Bucharest, Bucharest, Romania, viorel.gavril26@gmail.com Login Required This action requires you to be registered with Frontiers and logged in. To register or login click here. Abstract Info Abstract Supplemental Data The Authors in Frontiers Viorel D Gavril Google Viorel D Gavril Google Scholar Viorel D Gavril PubMed Viorel D Gavril Related Article in Frontiers Google Scholar PubMed Abstract Close Back to top Javascript is disabled. Please enable Javascript in your browser settings in order to see all the content on this page.