Synthesized Research Articles

Flavin‐Catalyzed, Photochemical Conversion of Dehydroalanine into 4,5‐Dihydroxynorvaline

The chemical synthesis of unnatural amino acids (UAA) is a key strategy for preparing designed peptides, including pharmaceutically active compounds. Alterations of existing amino acid residues such as dehydroalanine (Dha) are particularly important since selected positions can be addressed without the necessity of a complete de novo synthesis. The intriguing UAA 4,5‐dihydroxynorvaline (Dnv) is found in a variety of naturally occurring peptides and biologically active compounds. However, no method is currently available to modify an existing peptide with this residue. We report the use of flavin catalysts and visible light irradiation for this challenge, which serves as a versatile strategy for converting Dha into Dnv. Our study shows that excited flavins are competent hydrogen atom abstraction catalysts for ethers and acetals, which allows masked 1,2‐dihydroxyethylene functionalization from 2,2‐dimethyl‐1,3‐dioxolane. The masked diol was successfully coupled to Dha residues, and a series of Dnv‐containing products is reported. A mild and orthogonal protocol for deprotection of the acetal group was also identified, allowing free Dnv‐modified peptides to be obtained. This method provides a straightforward strategy for Dnv functionalization, which is envisioned to be crucial for accessing natural products and synthetic analogues with pharmaceutical activity.

Biocatalytic Dearomatisation Reactions

AbstractBiocatalytic dearomatisation offers the advantages of high chemo-, regio- and stereoselectivity over chemical strategies. Mono- and dioxygenases with dearomatising properties are already well-established tools for the synthesis of natural products and beyond. Herein, we review investigations of protein sequence–activity relationships, as well as protein-engineering approaches that have been employed to expand the substrate scope of biocatalysts and achieve product regio- and stereodiversity. Thus, oxidative dearomatising biocatalysts offer an increasingly diverse toolbox for the synthesis of asymmetric, oxidised cyclic scaffolds, as illustrated through selected examples of biocatalytic applications in synthetic routes towards natural products and derivatives thereof. Reductases with dearomatising properties have been less well investigated, so we review recent mechanistic findings which, henceforth, allow for expanding applications of this class of biocatalysts. Additionally, chemoenzymatic strategies have been developed to overcome the limitations of purely biocatalytic or chemical dearomatisation approaches. We highlight examples of those combination strategies for the synthesis of asymmetric privileged motifs.1 Introduction2 Oxidative Biocatalytic Dearomatisation3 Reductive Biocatalytic Dearomatisation4 Chemoenzymatic Dearomatisation5 Conclusion

Efficient Synthesis of the Pyoverdine Chromophore: Expanding the Toolbox for the Preparation of Pyoverdine Conjugates

The pyoverdine chromophore is an important component of a family of siderophores which are secreted by the human pathogen Pseudomonas aeruginosa for iron absorption. In this study, an efficient and improved synthetic route to the chromophore structure is reported, beginning from readily available starting materials, D‐glutamic acid and L‐DOPA. This strategy has not only delivered the first synthesis of the free pyoverdine D chromophore, but also offers potential access to a wide range of other pyoverdine chromophore species.

Metathesis Mastery: Crafting Linear Triquinane Frameworks for Natural Product Synthesis

AbstractOrganic and medicinal chemists have shown great interest in developing simple approaches for creating linear triquinane structures, as they are crucial for synthesizing both natural and synthetic products. Linear triquinane shows various biological characteristics like being commonly used for antitumor, antibacterial, and antimalarial purposes, making it a popular subject of study among synthetic chemists. These come from different sources like marine organisms, plants, and fungi and make up a significant group of sesquiterpenoids. These can be classified as cis‐syn‐cis or cis‐anti‐cis based on the stereochemistry at the ring junction, with cis‐anti‐cis being the most common type and exhibiting significant biological activity. In this review, we summarized different methods using a combination of photothermal and olefin metathesis strategy to construct a triquinane framework by utilizing both traditional heat and microwave radiation. Some commonly used synthetic methods, including metathesis protocol and key reactions like Grignard reaction and Diels–Alder reaction, were utilized together with ring‐closing, ring‐opining, and ring‐rearrangement metathesis to create the linear triquinane core for use in total synthesis of natural products. Additionally, the use of photothermal olefin metathesis along with Hosomi‐Sakurai reaction conditions allows for the creation of intricate polyquinanes, which can be used to produce complex natural compounds and for designing unique molecules theoretically.

Oxidative Cleavage of Alkoxyamines for Nucleophilic Substitution Reactions

Photoredox catalysis and synthetic electrochemistry have begun to find their spot in a synthetic chemist’s toolbox. Apart from its use of renewable reagents (light and electricity respectively), these methods have enabled pathways that were previously viewed as near impossible. It is therefore essential to develop methods to further advance the field of photoredox catalysis and synthetic electrochemistry. Alkoxyamines previously used for initiation of polymerization reactions are now viewed as prime building blocks for photoredox and synthetic electrochemists for their facile reactivity to oxidatively cleave C‐O bonds. This review begins with addressing the first method developed for generating carbocations via a mesolytic cleavage pathway, and then highlights the recent approaches to utilizing photoredox and synthetic electrochemistry on oxidative cleavage of alkoxyamines for nucleophilic substitution reactions. To demonstrate its applicability, this review also highlights its utilization in the enantioselective synthesis of (‐)‐calycanthidine and (‐)‐psychotriasine.

Synthesis of Marine (-)-Pelorol and Future Perspectives

Meroterpenoid-type marine natural compounds have attracted an increasing amount of attention due to their peculiar chemical structures and their potential for the development of therapeutically important probes. Within this group of substances pelorol stands out; it is a natural compound isolated from marine organisms with a unique structure and an interesting biological profile. In this article, we summarize and highlight the most interesting aspects of the synthetic procedures towards this compound, which have two common key steps. The first is the coupling of a drimanyl derivative with a compound derived from an arene. The second is a Friedel–Crafts cyclization which forms the C ring of the natural product. Despite the synthetic advances achieved so far, we consider that a more efficient synthetic procedures could be carried out, since their synthetic routes are difficult to scale up due to numerous reaction steps and the limitations imposed by the use of some reagents. In this article, we present a new and versatile retrosynthetic analysis of (-)-pelorol and analogs, which is highly desirable for their easy preparation and subsequent broad study of their biological activities. This is a retrosynthetic route that could improve those reported in the literature in terms of cost-effectiveness.

A novel propiolate-enabled deaminative hiyama coupling of aryl silanes and propargylamines

The development of general approaches for the regioselective construction of propargylic derivatives from propargylic electrophiles remains a formidable challenge in synthetic chemistry. Enabled by the newly developed propiolate-enabled C−N activation, we disclosed an efficient palladium-catalyzed deaminative Hiyama coupling of propargylamines with aryl silanes under microwave irradiation. Various structurally diverse propargyl derivatives are produced in good to excellent yields, utilizing propargylamines as propargylic electrophiles in which C−N bond was activated by in situ formed propargylic ammonium salts. The salient features of this protocol include readily or easily available feedstock, broad substrate scope, single-step preparation, and high regioselectivity.

The Liquid Metal Age: A Transition From Hg to Ga.

This review offers an illuminating journey through the historical evolution and modern-day applications of liquid metals, presenting a comprehensive view of their significance in diverse fields. Tracing the trajectory from mercury applications to contemporary innovations, the paper explores their pivotal role in industry and research. The analysis spans electrical switches, mechanical applications, electrodes, chemical synthesis, energy storage, thermal transport, electronics, and biomedicine. Each section examines the intricacies of liquid metal integration, elucidating their contributions to technological advancements and societal progress. Moreover, the review critically appraises the challenges and prospects inherent in liquid metal applications, addressing issues of recycling, corrosion management, device stability, economic feasibility, translational hurdles, and market dynamics. By delving into these complexities, the paper advances scholarly understanding and offers actionable insights for researchers, engineers, and policymakers. It aims to catalyze innovation, foster interdisciplinary collaboration, and promote liquid metal-enabled solutions for societal needs. Through its comprehensive analysis and forward-looking perspective, this review serves as a guide for navigating the landscape of liquid metal applications, bridging historical legacies with contemporary challenges, and highlighting the transformative potential of liquid metals in shaping future technologies.

Reactivity Inside Molecular Flasks: Acceleration Modes and Types of Selectivity Obtainable

There is increasing interest in the discovery and application of molecular flasks ‐ supramolecular host structures capable of catalyzing organic reactions. Reminiscent of enzymes due to possessing a host cavity akin to an active site, molecular flasks can exhibit complex catalytic mechanisms and in many cases provide selectivity not achievable in bulk solvent. In this Review, we aim to organize the increasingly diverse examples through a two‐part structure. In part one, we provide an overview of the different acceleration modes that operate within molecular flasks, while in part two we showcase, through selected examples, the different types of selectivity that are obtainable through the use of molecular flasks. Particular attention is given to examples that are relevant to current challenges in synthetic organic chemistry. We believe that this structure makes the field more approachable and thus will stimulate the development of novel applications of molecular flasks.

Reactivity Inside Molecular Flasks: Acceleration Modes and Types of Selectivity Obtainable.

There is increasing interest in the discovery and application of molecular flasks - supramolecular host structures capable of catalyzing organic reactions. Reminiscent of enzymes due to possessing a host cavity akin to an active site, molecular flasks can exhibit complex catalytic mechanisms and in many cases provide selectivity not achievable in bulk solvent. In this Review, we aim to organize the increasingly diverse examples through a two-part structure. In part one, we provide an overview of the different acceleration modes that operate within molecular flasks, while in part two we showcase, through selected examples, the different types of selectivity that are obtainable through the use of molecular flasks. Particular attention is given to examples that are relevant to current challenges in synthetic organic chemistry. We believe that this structure makes the field more approachable and thus will stimulate the development of novel applications of molecular flasks.

Cyano-Substituted Oligo(p-phenylene vinylene) Derivatives with Aggregation-Induced Enhanced Emissions and Mechanofluorochromic Luminescence

Developing red fluorescence emitters with simple structures via convenient synthetic routes is highly desirable yet challenging. Herein, two novel donor–acceptor-type red emitters, DCFOPV-TPA and SCFOPV-TPA, featuring the intramolecular charge transfer effect were designed by integrating triphenylamine and trifluoromethyl into a CN-substituted oligo(p-phenylene vinylene) backbone. Both chromophores exhibited aggregation-induced enhanced emission and solvatochromic behavior. Moreover, DCFOPV-TPA also displayed reversible mechanofluorochromic properties under external force.

Decarboxylation of Aza-Annulation Products as a Synthetic Route to 3-Pyrrolin-2-ones and 1,2,3,4-Tetrahydropyridin-2-ones.

Aza-annulation of enamines derived from β-ketoesters with maleic and itaconic anhydrides proceeds with excellent diastereoselectivity to provide functionalized γ- and δ-lactams. Further hydrolysis of the aza-annulation products resulted in dicarboxylic acids that underwent spontaneous decarboxylation under ambient conditions. The decarboxylation of β-γ unsaturated carboxylic acids with an electron-rich enamide C═C bond proceeds with the migration of the C═C bond and serves as a practical synthetic entry into 3-pyrrolin-2-ones and 1,2,3,4-tetrahydropyridin-2-ones.

Hydrophilic and Hydrophobic: Modified GeO2 Aerogels by Ambient Pressure Drying

An ever-increasing number of applications of oxide aerogels places a high demand on wettability-tuning techniques. This work explores the possibility to cheaply prepare GeO2 aerogels with controlled wettability by an ambient pressure drying (APD) method. GeO2 aerogels are prepared via two synthetic routes. Surface modification is carried out by soaking the gels in a silylating agent solution; type and concentration of the modifier are optimized to achieve a large surface area. The aerogels have been characterized by Fourier transform infrared spectroscopy, scanning electron microscopy, nitrogen adsorption and contact angle measurements. The effect of surface modification on the phase composition and particle size of the aerogels is described. In summary, the work provides a new cheap production method for the preparation of both hydrophobic and hydrophilic GeO2 aerogels with contact angle varying from 30° to 141° and with surface area of 90–140 m2/g, which facilitates the expansion of their diverse applications. GeO2 aerogel synthesis by APD is reported for the first time.

Reduction of Tertiary Carbon Radicals via Asymmetric Hydrogen Atom Transfer (AHAT)†

Comprehensive SummaryIn the past two decades, the development of asymmetric radical reactions has achieved tremendous progress, which has emerged as a powerful tool for the synthesis of chiral molecules in synthetic chemistry. Among the diverse array of radical processes, the transfer of hydrogen atoms to tertiary carbon radicals offers the potential for constructing chiral tertiary carbon centers in a stereoselective fashion. Notwithstanding the challenges associated with the reactive and evanescent nature of radical species, the use of chiral reagents or mediators has enabled the stereocontrol of the asymmetric hydrogen atom transfer (AHAT), which provides novel avenues for advancing the field of asymmetric synthesis. Key Scientists

Synthesis, antimicrobial activity, and mechanistic studies of enterocin DD14, a leaderless two-peptide bacteriocin

Bacteriocins are promising alternatives to antibiotics in the food, veterinary and medical sectors, but their study and use is often hampered by the low yields and high costs associated with their purification from naturally occurring bacteria. Chemical synthesis has emerged as a means to overcome this limitation and design more active variants. In this study, microwave-assisted solid-phase peptide synthesis was used to produce the leaderless two-peptide bacteriocin enterocin DD14 (EntDD14), composed of EntDD14A (44 amino acids) and EntDD14B (43 amino acids). The resulting synthetic peptides, syn-EntDD14A and syn-EntDD14B, were tested against Gram-positive bacteria including Listeria, Staphylococcus and Enterococcus strains. Both peptides were found to be necessary for optimal, but not synergistic, antibacterial activity and to act through a pore-forming mechanism. Both peptides exhibited moderate cytotoxicity against eukaryotic cells.

De Novo Synthesis of Perdeuterated Phosphoinositide by Installing a Non-native Phospholipid Biopathway in E. coli.

Phosphatidylinositol (PI) and its phosphorylated derivatives are of paramount importance in cellular functions and diseases. Understanding their diverse roles is, however, challenged by difficulties in synthesis and labeling techniques. In this proof-of-concept study, we demonstrate that PI can be straightforwardly de novo-synthesized and deuterium (2H)-labeled in Escherichia coli by genomic insertion of PI synthase from Trypanosoma brucei under constitutive synthetic promoter proD. Insertion into loci atpi-gidB and ybb revealed PI accumulation of 41% and 34% (mol/mol), respectively, when cultivated with glycerol as the sole carbon source. Growth of the atpi-gidB-PIS strain in deuterium-labeled (2H) substrates D2O, D8-glycerol, and D6-myo-inositol achieved PI deuteration of 90%, PE deuteration of 95%, and total fatty acids|fatty acid (FA) deuteration of 97%. This study offers an alternative convenient route to chemical and enzymatic labeling synthesis of PI; more excitingly, this work also, in principle, opens a door for tailoring the FA profile of deuterated PI/PE for task-specific application by repurposing FA biosynthesis pathways.

Synthesis of α,α-Difluoromethylene Amines from Thioamides Using Silver Fluoride.

We developed a mild, rapid process employing AgF and thioamides to produce α,α-difluoromethylene amines efficiently. This method exhibited remarkable tolerance toward various functional groups present in N-sulfonylthioamides, thereby broadening the scope of difluoromethylene sulfonamides through a straightforward approach. Additionally, we applied this approach to synthesize various perfluoroalkyl amines, establishing practical synthetic routes for exploring these compounds in pharmaceutical chemistry and materials science.

Hierarchically N-doped porous carbon synthesized from 3D cellulose alcogel decorated by in-situ growth of ZIF-8 for high performance CO2 capture

The physical properties and chemical compositions of porous carbons are crucial factors in determining their effectiveness in adsorbing CO2. Cellulose-based porous carbon has emerged as an outstanding candidate adsorbent for CO2 capture. The research involved the creation of hierarchically nitrogen-doped porous carbon (HNC) using a 3D cellulose alcogel (CA) as substrate, which was prepared through a thermal introduced phase separation (TIPS) method combined with hydrolysis treatment. The plentiful functional groups of CA offered abundant growth sites for the introduction of ZIF-8 crystals. CA/ZIF-8 composite alcogel (CZA) with greater surface area and superior thermal stability compared to CA was successfully fabricated and used as precursor for the production of HNC. The important effects of microporosity and surface chemistry of HNC samples on CO2 capture were discussed in-depth. HNC-350–850 displayed a hierarchically porous structure with a large number of micropores and abundant N/O/Zn-doped functional groups, exhibiting high CO2 uptakes at 1 bar (3.56 mmol/g at 25 °C), good IAST CO2/N2 (15/85, V/V) selectivity of 16.31 at 25 °C, and outstanding regenerability with ∼100 % CO2 adsorption capacity retained after ten cycles. In the two-component CO2/N2 (15/85, V/V) competitive adsorption process, the maximum breakthrough periods for CO2 (433.1 s) is significantly longer than that of N2 (3.8 s). The CO2 breakthrough adsorption capacity reached 1.79 mmol/g at 25 °C and 1 bar with the separation coefficient of 45.8 for CO2 over N2. These results confirmed that HNC, in addition to having excellent CO2/N2 selectivity, demonstrated good feasibility for practical use. The green and practicable synthetic route described in this study is not only expected to offer novel adsorbents for high performance CO2 capture, but also provide a new theoretical foundation for the development of cellulose-based porous materials.

Atom Efficient Synthesis of Trimethine Cyanines Using Formaldehyde as a Single Carbon Source.

In this work, we present an innovative and atom-efficient synthesis of trimethine cyanines (Cy3) using formaldehyde (FA) as a single-carbon reagent. The widespread application of Cy3 dyes in bioimaging and genomics/proteomics is often limited by synthetic routes plagued with low atom economy and substantial side-product formation. Through systematic investigation, we have developed a practical and efficient synthetic pathway for both symmetric and asymmetric Cy3 derivatives, significantly minimizing resource utilization. Notably, this approach yields water as the byproduct, in alignment with sustainable chemistry principles. Moreover, the efficient one-pot synthesis facilitates the detection of intracellular FA levels, utilizing the fluorescence signal of Cy3 in live cells. It is also possible to detect the endogenous FA in the intestinal tissues. We observed a significant decrease of FA in the small intestine of the inflammatory bowel disease (IBD) mice compared to the healthy mice. This methodological advancement not only enhances the scope of fluorescent dye synthesis but also contributes to the sustainable practices within chemical manufacturing, offering a significant leap forward in the development of environmentally friendly synthetic strategies.

Microwave and ultrasound-assisted green protocols for 5-methylthiazole induced Betti bases: molecular docking, in-silico pharmacokinetics, and anticancer activity studies

ABSTRACT Herein, we describe an efficient one-pot three-component microwave and ultrasound-endorsed approaches for synthesizing distinct 5-methylthiazole induced Betti bases (5-methyl-thiazol-2-ylamino-aryl-benzylnapthols) employing silica sulfuric acid (SSA, silica-OSO3H) as an active heterogeneous acid catalyst. The title compounds produced in good yields (86–95%) from naphthalen-2-ol, 5-methylthiazol-2-amine, and assorted aryl aldehydes; and structurally characterized by spectral and elemental analyses. A comprehensive comparative study of conventional, ultrasonic, and microwave-irradiated synthetic routes has been achieved by optimizing various reaction parameters. These new protocols provide several advantages, including the use of an inexpensive, non-toxic, and reusable catalyst. Additionally, they benefit from mild reaction conditions, short reaction times, and simple workup and purification procedures, thereby increasing their practicality. Furthermore, the synthesized compounds were evaluated for their anticancer potency against A-549 (lung cancer) and A-498 (kidney cancer) cell lines, with scaffold IVa demonstrating excellent (GI50 < 10 µg/mL) inhibitory activity against A-549. Additionally, molecular docking was performed to investigate potential binding interactions between ligands and proteins. Scaffold IVa exhibited the best docking with cancerous target proteins 1M17 (−8.9 kcal/mol) and 1M14 (−7.2 kcal/mol), thereby supporting our bio-activity studies.