Stretch Band Research Articles

Dispersion Stability, Ligand Structure and Conformation, and SERS Activities of 1-Alkanethiol Functionalized Gold and Silver Nanoparticles

Dispersion stability, ligand structure and conformation, and SERS activities of 1-alkanethiol (CnH2n+1SH, n = 2–14) functionalized gold and silver nanoparticles (AuNPs and AgNPs) were studied as a function of alkanethiol carbon chain length and nanoparticle (NP) type and size. The dispersion stability of alkanethiol functionalized NPs in water increases with increasing alkanethiol chain length and NP size, and the stabilities of the alkanethiol-containing AuNPs are higher than their AgNP counterparts. C3H7SH and longer alkanethiols are highly ordered on AgNPs but disordered on AuNPs. The SERS intensity of the C–S stretch band for the model alkanethiols on AgNPs and AuNPs decays exponentially (I = I0 exp(−Nc/N0)) with increasing number of carbon atoms (Nc). The empirical decay length N0, in terms of the number of the carbon atoms, is 1.29, 0.53, and 0.10 for AgNPs with diameters of 50, 30, and 10 nm, respectively. This decay length is less than 1 for AuNPs of difference sizes. These results show that changing the NP gap size by a distance equivalent to a single chemical bond can have a significant impact on the NP integrated SERS activities.

Evaluation of antibiotic effects on Pseudomonas aeruginosa biofilm using Raman spectroscopy and multivariate analysis.

We investigate the mode of action and classification of antibiotic agents (ceftazidime, patulin, and epigallocatechin gallate; EGCG) on Pseudomonas aeruginosa (P. aeruginosa) biofilm using Raman spectroscopy with multivariate analysis, including support vector machine (SVM) and principal component analysis (PCA). This method allows for quantitative, label-free, non-invasive and rapid monitoring of biochemical changes in complex biofilm matrices with high sensitivity and specificity. In this study, the biofilms were grown and treated with various agents in the microfluidic device, and then transferred onto gold-coated substrates for Raman measurement. Here, we show changes in biochemical properties, and this technology can be used to distinguish between changes induced in P. aeruginosa biofilms using three antibiotic agents. The Raman band intensities associated with DNA and proteins were decreased, compared to control biofilms, when the biofilms were treated with antibiotics. Unlike with exposure to ceftazidime and patulin, the Raman spectrum of biofilms exposed to EGCG showed a shift in the spectral position of the CH deformation stretch band from 1313 cm(-1) to 1333 cm(-1), and there was no difference in the band intensity at 1530 cm(-1) (C = C stretching, carotenoids). The PCA-SVM analysis results show that antibiotic-treated biofilms can be detected with high sensitivity of 93.33%, a specificity of 100% and an accuracy of 98.33%. This method also discriminated the three antibiotic agents based on the cellular biochemical and structural changes induced by antibiotics with high sensitivity and specificity of 100%. This study suggests that Raman spectroscopy with PCA-SVM is potentially useful for the rapid identification and classification of clinically-relevant antibiotics of bacteria biofilm. Furthermore, this method could be a powerful approach for the development and screening of new antibiotics.

Water Dynamics in Metal-Organic Frameworks: Effects of Heterogeneous Confinement Predicted by Computational Spectroscopy.

The behavior of water confined in MIL-53(Cr), a flexible metal-organic framework (MOF), is investigated through computational infrared spectroscopy. As the number of molecules adsorbed inside of the pores increases, the water OH stretch band of the linear infrared spectrum grows in intensity and approaches that of bulk water. To assess whether the water confined in MIL-53(Cr) becomes liquid-like, two-dimensional infrared spectra (2DIR) are also calculated. Confinement effects result in distinct chemical environments that appear as specific features in the 2DIR spectra. The evolution of the 2DIR line shape as a function of waiting time is well described in terms of the orientational dynamics of the water molecules, with chemical exchange cross peaks appearing at a time scale similar to the hydrogen bond rearrangement lifetime. The confining environment considerably slows the hydrogen bond dynamics relative to bulk as a result of the competition between water-framework and water-water interactions.

Molecular spectroscopic identification of the water compartments in bone

Matrix bound water is a correlate of bone's fracture resistance and assessment of bound water is emerging as a novel measure of bone's mechanical integrity. Raman spectroscopy is one of the few nondestructive modalities to assess the hydration status in bone; however, it has not been used to study the OH-band in bone. A sequential dehydration protocol was developed to replace unbound (heat drying) and bound (ethanol or deuterium) water in bone. Raman spectra were collected serially to track the OH-band during dehydration. Spectra of synthetic hydroxyapatite, demineralized bone and bulk water were collected to identify mineral and collagen contributions to the OH-band. Band assignments were supported by computational simulations of the molecular vibrations of Gly-Pro-Hyp amino acid sequence. Experimentally and theoretically obtained spectra were interpreted for band-assignments. Water loss was measured gravimetrically and correlated to Raman intensities. Four peaks were identified to be sensitive to dehydration: 3220cm−1 (water), 3325cm−1 (NH and water), 3453cm−1 (hydroxyproline and water), and 3584cm−1 (mineral and water). These peaks were differentially sensitive to deuterium treatment such that some water peaks were replaced with deuterium oxide faster than the rest. Specifically, the peaks at 3325 and 3584cm−1 were more tightly bound to the matrix than the remaining bands. Comparison of dehydration in mineralized and demineralized bone revealed a volume of water that may be locked in the matrix by mineral crystals. The OH-range of bone was dominated by collagen and the water since the spectral profile of dehydrated demineralized bone was similar to that of the mineralized bone. Furthermore, water associates to bone mainly by collagen as findings of experimentally and theoretically spectra. The current work is among the first thorough analysis of the Raman OH stretch band in bone and such spectral information may be used to understand the involvement of water in the fragility of aging and in diseased bone.

Local-monomer calculations of the intramolecular IR spectra of the cage and prism isomers of HOD(D2O)5 and HOD and D2O ice Ih.

Dilute mixtures of HOD in pure H2O and D2O ices and liquid have been used by experimentalists to focus on the spectrum and vibrational dynamics of the local OH and OD stretches and bend of HOD in these complex and highly heterogeneous environments. The hexamer version of the mixture is HOD(D2O)5. The cage isomer of this cluster was recently studied and analyzed theoretically using local-mode calculations of the IR spectrum by Skinner and co-workers. This and the further possibility of experimental investigation of this cluster have stimulated us to study HOD(D2O)5 using the three-mode, local-monomer model, with the ab initio WHBB dipole moment and potential energy surfaces. Both the cage and prism isomers of this cluster are considered. In addition to providing additional insight into the HOD portion of the spectrum, the spectral signatures of each D2O are also presented in the range of 1000-4000 cm(-1). The OH stretch bands of both the prism and cage isotopomers exhibit rich structures in the range of 3100-3700 cm(-1) that are indicative of the position of the HOD in these hexamers. A preliminary investigation of the site preference of the HOD is also reported for both cage and prism HOD(D2O)5 using an harmonic zero-point energy analysis of the entire cluster. This indicates that the energies of free-OH sites are lower than the ones of H-bonded OH sites. Finally, following our earlier work on the IR spectra of H2O ice models, we present IR spectra of pure D2O and HOD.

Microstructural response of variably hydrated Ca-rich montmorillonite to supercritical CO2.

First-principles molecular dynamics simulations were carried out to explore the mechanistic and thermodynamic ramifications of the exposure of variably hydrated Ca-rich montmorillonites to supercritical CO2 and CO2-SO2 mixtures under geologic storage conditions. In sub- to single-hydrated systems (≤ 1W), CO2 intercalation causes interlamellar expansion of 8-12%, while systems transitioning to 2W may undergo contraction (∼ 7%) or remain almost unchanged. When compared to ∼2W hydration state, structural analysis of the ≤ 1W systems, reveals more Ca-CO2 contacts and partial transition to vertically confined CO2 molecules. Infrared spectra and projected vibrational frequency analysis imply that intercalated Ca-bound CO2 are vibrationally constrained and contribute to the higher frequencies of the asymmetric stretch band. Reduced diffusion coefficients of intercalated H2O and CO2 (10(-6)-10(-7) cm(2)/s) indicate that Ca-montmorillonites in ∼ 1W hydration states can be more efficient in capturing CO2. Simulations including SO2 imply that ∼ 0.66 mmol SO2/g clay can be intercalated without other significant structural changes. SO2 is likely to divert H2O away from the cations, promoting Ca-CO2 interactions and CO2 capture by further reducing CO2 diffusion (10(-8) cm(2)/s). Vibrational bands at ∼ 1267 or 1155 cm(-1) may be used to identify the chemical state (oxidation states +4 or +6, respectively) and the fate of sulfur contaminants.

Relaxation mechanism of β-carotene from S2 (1Bu(+)) state to S1 (2Ag(-)) state: femtosecond time-resolved near-IR absorption and stimulated resonance Raman studies in 900-1550 nm region.

Carotenoids have two major low-lying excited states, the second lowest (S2 (1Bu(+))) and the lowest (S1 (2Ag(-))) excited singlet states, both of which are suggested to be involved in the energy transfer processes in light-harvesting complexes. Studying vibrational dynamics of S2 carotenoids requires ultrafast time-resolved near-IR Raman spectroscopy, although it has much less sensitivity than visible Raman spectroscopy. In this study, the relaxation mechanism of β-carotene from the S2 state to the S1 state is investigated by femtosecond time-resolved multiplex near-IR absorption and stimulated Raman spectroscopy. The energy gap between the S2 and S1 states is estimated to be 6780 cm(-1) from near-IR transient absorption spectra. The near-IR stimulated Raman spectrum of S2 β-carotene show three bands at 1580, 1240, and 1050 cm(-1). When excess energy of 4000 cm(-1) is added, the S1 C═C stretch band shows a large upshift with a time constant of 0.2 ps. The fast upshift is explained by a model that excess energy generated by internal conversion from the S2 state to the S1 state is selectively accepted by one of the vibronic levels of the S1 state and is redistributed among all the vibrational modes.

Effects of Ions on the OH Stretching Band of Water as Revealed by ATR-IR Spectroscopy

The effects of various cations (Li+, Na+, K+, Rb+, Cs+, Mg2+, Ca2+, Sr2+, Ba2+, Mn2+, Co2+, and Ni2+) and anions (Cl−, Br−, I−, $$ {\text{NO}}_{3}^{ - } $$ , $$ {\text{ClO}}_{4}^{ - } $$ , $$ {\text{HCO}}_{3}^{ - } $$ , and $$ {\text{CO}}_{3}^{2 - } $$ ) on the molar absorptivity of water in the OH stretching band region (2,600–3,800 cm−1) were ascertained from attenuated total reflection infrared spectra of aqueous electrolyte solutions (22 in all). The OH stretching band mainly changes linearly with ion concentrations up to 2 mol·L−1, but several specific combinations of cations and anions (Cs2SO4, Li2SO4, and MgSO4) present different trends. That deviation is attributed to ion pair formation and cooperativity in ion hydration, which indicates that the extent of the ion–water interaction reflected by the OH stretching band of water is beyond the first solvation shell of water molecules directly surrounding the ion. The obtained dataset was then correlated with several quantitative parameters representing structural and dynamic properties of water molecules around ions: ΔG HB, the structural entropy (S str), the viscosity B-coefficient (B η ), and the ionic B-coefficient of NMR relaxation (B NMR). Results show that modification of the OH stretching band of water caused by ions has quasi-linear relations with all of these parameters. Vibrational spectroscopy can be a useful means for evaluating ion–water interaction in aqueous solutions.

Time-Resolved IR Spectroscopy of 1,3-Dicyanophenylcyclopentane-1,3-diyl Diradicals: CN Stretching Wavenumber as a Vibrational Signature of Radical Character

CN stretch bands of singlet and triplet cyclopentane-1,3-diyl diradicals (1,3-di(4-cyanophenyl)-2,2-dimethoxyoctahydropentalene-1,3-diyl and 1,3-di(4-cyanophenyl)-2,2-dimethyloctahydropentalene-1,3-diyl) were observed by time-resolved IR spectroscopy. CN stretching wavenumbers of the singlet and triplet diradicals were downshifted by 10 and 19 cm(-1) from those of their corresponding ring-closed compounds, which are in closed-shell electronic states, respectively. The observed downshifts are attributed to the bond-order decrease in the CN bonds due to the contribution from a resonance structure that has cumulative double bonds (C ═ C ═ N(•)) at the para-positions of the radical carbons. This resonance structure is only possible when the molecules have unpaired electrons; thus, the wavenumber downshift can be regarded as an experimental manifestation of the radical character of the diradicals. The observed CN stretching wavenumbers indicate that the radical character of the singlet diradical is less significant than that of the triplet. The smaller radical character is ascribed to the contribution from the zwitterionic and π-single bonding resonance structures in the singlet diradical. Unrestricted DFT calculations at the B3LYP level of theory with the 6-31G(d) basis set reproduced the small/large relationship between the wavenumber downshifts of the singlet and triplet diradicals; however, the shift of the singlet diradical was overestimated.

Energy Landscape of the Michaelis Complex of Lactate Dehydrogenase: Relationship to Catalytic Mechanism

Lactate dehydrogenase (LDH) catalyzes the interconversion between pyruvate and lactate with nicotinamide adenine dinucleotide (NAD) as a cofactor. Using isotope-edited difference Fourier transform infrared spectroscopy on the “live” reaction mixture (LDH·NADH·pyruvate ⇌ LDH·NAD+·lactate) for the wild-type protein and a mutant with an impaired catalytic efficiency, a set of interconverting conformational substates within the pyruvate side of the Michaelis complex tied to chemical activity is revealed. The important structural features of these substates include (1) electronic orbital overlap between pyruvate’s C2=O bond and the nicotinamide ring of NADH, as shown from the observation of a delocalized vibrational mode involving motions from both moieties, and (2) a characteristic hydrogen bond distance between the pyruvate C2=O group and active site residues, as shown by the observation of at least four C2=O stretch bands indicating varying degrees of C2=O bond polarization. These structural features form a critical part of the expected reaction coordinate along the reaction path, and the ability to quantitatively determine them as well as the substate population ratios in the Michaelis complex provides a unique opportunity to probe the structure–activity relationship in LDH catalysis. The various substates have a strong variance in their propensity toward on enzyme chemistry. Our results suggest a physical mechanism for understanding the LDH-catalyzed chemistry in which the bulk of the rate enhancement can be viewed as arising from a stochastic search through an available phase space that, in the enzyme system, involves a restricted ensemble of more reactive conformational substates as compared to the same chemistry in solution.

Contraction-Induced Changes in Hydrogen Bonding of Muscle Hydration Water.

Protein–water interaction plays a crucial role in protein dynamics and hence function. To study the chemical environment of water and proteins with high spatial resolution, synchrotron radiation-Fourier transform infrared (SR-FTIR) spectromicroscopy was used to probe skeletal muscle myofibrils. Observing the OH stretch band showed that water inside of relaxed myofibrils is extensively hydrogen-bonded with little or no free OH. In higher-resolution measurements obtained with single isolated myofibrils, the water absorption peaks were relatively higher within the center region of the sarcomere compared to those in the I-band region, implying higher hydration capacity of thick filaments compared to the thin filaments. When specimens were activated, changes in the OH stretch band showed significant dehydrogen bonding of muscle water; this was indicated by increased absorption at ∼3480 cm–1 compared to relaxed myofibrils. These contraction-induced changes in water were accompanied by splitting of the amide I (C=O) peak, implying that muscle proteins transition from α-helix to β-sheet-rich structures. Hence, muscle contraction can be characterized by a loss of order in the muscle–protein complex, accompanied by a destructuring of hydration water. The findings shed fresh light on the molecular mechanism of muscle contraction and motor protein dynamics.

Infrared laser spectroscopy of the helium-solvated allyl and allyl peroxy radicals

Infrared spectra in the C-H stretch region are reported for the allyl (CH2CHCH2) and allyl peroxy (CH2=CH-CH2OO·) radicals solvated in superfluid helium nanodroplets. Nine bands in the spectrum of the allyl radical have resolved rotational substructure. We have assigned three of these to the ν1 (a1), ν3 (a1), and ν13 (b2) C-H stretch bands and four others to the ν14/(ν15+2ν11) (b2) and ν2/(ν4+2ν11) (a1) Fermi dyads, and an unassigned resonant polyad is observed in the vicinity of the ν1 band. Experimental coupling constants associated with Fermi dyads are consistent with quartic force constants obtained from density functional theory computations. The peroxy radical was formed within the He droplet via the reaction between allyl and O2 following the sequential pick-up of the reactants. Five stable conformers are predicted for the allyl peroxy radical, and a computed two-dimensional potential surface for rotation about the CC-OO and CC-CO bonds reveals multiple isomerization barriers greater than ≈300 cm(-1). Nevertheless, the C-H stretch infrared spectrum is consistent with the presence of a single conformer following the allyl + O2 reaction within helium droplets.

How Ions Affect the Structure of Water: A Combined Raman Spectroscopy and Multivariate Curve Resolution Study

Raman spectroscopy in combination with multivariate curve resolution (Raman-MCR) is used to explore the interaction between water and various kosmotropic and chaotropic anions. Raman-MCR of aqueous Na-salt (NaI, NaBr, NaNO3, Na2SO4, and Na3PO4) solutions provides solute-correlated Raman spectra (SC-spectra) of water. The SC-spectra predominantly bear the vibrational characteristics of water in the hydration shell of anions, because Na(+)-cation has negligible effect on the OH stretch band of water. The SC-spectra for the chaotropic I(-), Br(-), and NO3(-) anions and even for the kosmotropic SO4(2-) anion resemble the Raman spectrum of isotopically diluted water (H2O/D2O = 1/19; v/v) whose OH stretch band is largely comprised by the response of vibrationally decoupled OH oscillators. On the other hand, the SC-spectrum for the kosmotropic PO4(3-) anion is quite similar to the Raman spectrum of H2O (bulk). Comparison of the peak positions of SC-spectra and the Raman spectrum of isotopically diluted water suggests that the hydrogen bond strength of water in the hydration shell of SO4(2-) is comparable to that of the isotopically diluted water, but that in the hydration shell of I(-), Br(-), and NO3(-) anions is weaker than that of the latter. Analysis of integrated area of component bands of the SC-spectra reveals ∼80% reduction of the delocalization of vibrational modes (intermolecular coupling and Fermi resonance) of water in the hydration shell of I(-), Br(-), NO3(-), and SO4(2-) anions. In the case of trivalent PO4(3-), the vibrational delocalization is presumably reduced and the corresponding decrease in spectral response at ∼3250 cm(-1) is compensated by the increased signal of strongly hydrogen bonded (but decoupled) water species in the hydration shell. The peak area-averaged wavenumber of the SC-spectrum increases as PO4(3-) < SO4(2-) < NO3(-) < Br(-) < I(-) and indeed suggests strong hydrogen bonding of water in the hydration shell of PO4(3-) anion.

On the ν12 band of C6D6 at 2289 cm−1

New supersonic jet spectra (T≈2.5K) show that the analysis by Plíva et al. (1994) of the ν12 (C–D stretch) band of C6D6 near 2289cm−1 is partly incorrect. In particular, the ν2+ν13 combination band, which is strongly coupled to ν12 by a Fermi interaction, is centered at 2275.878cm−1, which is 1.22cm−1 higher than previously determined.

FTIR spectroscopic studies of lithium tetrafluoroborate in propylene carbonate + diethyl carbonate mixtures

FTIR (Fourier transformed infrared) spectra have been collected and analyzed for solutions of lithium tetrafluoroborate in propylene carbonate (PC), diethyl carbonate (DEC), and PC+DEC mixtures. It has been shown that the carbonyl stretch bands of PC and DEC, the ring of PC and the ether oxygen stretch bands of DEC are all very sensitive to the interaction between Li+ and the solvent molecules. New shoulders appear and the original bands split with the addition of LiBF4, indicating that a strong interaction between Li+ and molecules of PC and DEC exists through the oxygen group of CO and ring of PC and both CO oxygen and ether oxygen atoms of DEC. In addition, no preferential solvation of Li+ in LiBF4/PC+DEC solutions was detected.

Communication: Ultrafast vibrational dynamics of hydrogen bond network terminated at the air/water interface: A two-dimensional heterodyne-detected vibrational sum frequency generation study

Ultrafast vibrational dynamics of hydrogen bond network at the air∕water interface is revealed by two-dimensional heterodyne-detected vibrational sum frequency generation (2D HD-VSFG) spectroscopy. Three diagonal peaks are clearly observed in the 2D HD-VSFG spectrum, which correspond to the negative and positive hydrogen-bonded OH stretch bands and the positive "free" OH stretch band in the steady-state HD-VSFG spectrum. A diagonally elongated bleaching lobe of the hydrogen-bonded OH at 0 ps indicates that it is partly inhomogeneously broadened. This diagonal elongation vanishes in a few hundred femtoseconds, implying the ultrafast spectral diffusion in the hydrogen-bonded OH band. Off-diagonal cross peaks between each OH oscillator are clearly observed instantaneously within the time resolution of 0.2 ps, suggesting that they are vibrationally coupled through anharmonicity and∕or energy transfer.

Effective Pumping Proton Collection Facilitated by a Copper Site (CuB) of Bovine Heart Cytochrome c Oxidase, Revealed by a Newly Developed Time-resolved Infrared System

X-ray structural and mutational analyses have shown that bovine heart cytochrome c oxidase (CcO) pumps protons electrostatically through a hydrogen bond network using net positive charges created upon oxidation of a heme iron (located near the hydrogen bond network) for O2 reduction. Pumping protons are transferred by mobile water molecules from the negative side of the mitochondrial inner membrane through a water channel into the hydrogen bond network. For blockage of spontaneous proton back-leak, the water channel is closed upon O2 binding to the second heme (heme a3) after complete collection of the pumping protons in the hydrogen bond network. For elucidation of the structural bases for the mechanism of the proton collection and timely closure of the water channel, conformational dynamics after photolysis of CO (an O2 analog)-bound CcO was examined using a newly developed time-resolved infrared system feasible for accurate detection of a single C=O stretch band of α-helices of CcO in H2O medium. The present results indicate that migration of CO from heme a3 to CuB in the O2 reduction site induces an intermediate state in which a bulge conformation at Ser-382 in a transmembrane helix is eliminated to open the water channel. The structural changes suggest that, using a conformational relay system, including CuB, O2, heme a3, and two helix turns extending to Ser-382, CuB induces the conformational changes of the water channel that stimulate the proton collection, and senses complete proton loading into the hydrogen bond network to trigger the timely channel closure by O2 transfer from CuB to heme a3.

Power to the will: How exerting physical effort boosts the sense of agency

The sense of agency refers to the experience of being in control of one’s actions and their consequences. The 19th century French philosopher Maine de Biran proposed that the sensation of effort might provide an internal cue for distinguishing self-caused from other changes in the environment. The present study is the first to empirically test the philosophical idea that effort promotes self-agency. We used intentional binding, which refers to the subjective temporal attraction between an action and its sensory consequences, as an implicit measure of the sense of agency. Effort was manipulated independent of the primary task by requiring participants to pull stretch bands of varying resistance levels. We found that intentional binding was enhanced under conditions of increased effort. This suggests not only that the experience of effort directly contributes to the sense of agency, but also that the integration of effort as an agency cue is non-specific to the effort requirement of the action itself.

Ion‐Pairing of Phosphonium Salts in Solution: CH⋅⋅⋅Halogen and CH⋅⋅⋅π Hydrogen Bonds

The (1) H NMR chemical shifts of the C(α)H protons of arylmethyl triphenylphosphonium ions in CD2 Cl2 solution strongly depend on the counteranions X(-) . The values for the benzhydryl derivatives Ph2 CHPPh3 (+) X(-) , for example, range from δH =8.25 (X(-) =Cl(-) ) over 6.23 (X(-) =BF4 (-) ) to 5.72 ppm (X(-) =BPh4 (-) ). Similar, albeit weaker, counterion-induced shifts are observed for the ortho-protons of all aryl groups. Concentration-dependent NMR studies show that the large shifts result from the deshielding of the protons by the anions, which decreases in the order Cl(-) > Br(-) ≫ BF4 (-) > SbF6 (-) . For the less bulky derivatives PhCH2 PPh3 (+) X(-) , we also find CH⋅⋅⋅Ph interactions between C(α)H and a phenyl group of the BPh4 (-) anion, which result in upfield NMR chemical shifts of the C(α)H protons. These interactions could also be observed in crystals of (p-CF3 -C6 H4 )CH2 PPh3 (+) BPh4 (-) . However, the dominant effects causing the counterion-induced shifts in the NMR spectra are the CH⋅⋅⋅X(-) hydrogen bonds between the phosphonium ion and anions, in particular Cl(-) or Br(-) . This observation contradicts earlier interpretations which assigned these shifts predominantly to the ring current of the BPh4 (-) anions. The concentration dependence of the (1) H NMR chemical shifts allowed us to determine the dissociation constants of the phosphonium salts in CD2 Cl2 solution. The cation-anion interactions increase with the acidity of the C(α)H protons and the basicity of the anion. The existence of CH⋅⋅⋅X(-) hydrogen bonds between the cations and anions is confirmed by quantum chemical calculations of the ion pair structures, as well as by X-ray analyses of the crystals. The IR spectra of the Cl(-) and Br(-) salts in CD2 Cl2 solution show strong red-shifts of the CH stretch bands. The CH stretch bands of the tetrafluoroborate salt PhCH2 PPh3 (+) BF4 (-) in CD2 Cl2 , however, show a blue-shift compared to the corresponding BPh4 (-) salt.

Impact of Bran Addition on Water Properties and Gluten Secondary Structure in Wheat Flour Doughs Studied by Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy

ABSTRACTThe aim of this work was to elucidate the underlying physical mechanism(s) by which bran influences whole grain dough properties by monitoring the state of water and gluten secondary structure in wheat flour and bran doughs containing 35–50% moisture and 0–10% added bran. The system was studied with attenuated total reflectance (ATR) FTIR spectroscopy. Comparison of the OH stretch band of water in flour dough with that in H2O‐D2O mixtures having the same water content revealed the formation of two distinct water populations in flour dough corresponding to IR absorption frequencies at 3,600 and 3,200 cm–1. The band intensity at 3,200 cm–1, which is related to water bound to the dough matrix, decreased and shifted to lower frequencies with increasing moisture content of the dough. Addition of bran to the dough caused redistribution of water in the flour and bran dough system, as evidenced by shifts in OH stretch frequency in the 3,200 cm–1 region to higher frequencies and a reduction in monomeric water (free water). This water redistribution affected the secondary structure of gluten in the dough, as evidenced by changes in the second‐derivative ATR‐FTIR difference spectra in the amide I region. Bran addition caused an increase in β‐sheet content and a decrease in β‐turn (β‐spiral) content. However, this bran‐induced transconformational change in gluten was more significant in the 2137 flour dough than in Overley flour dough. This study revealed that when bran is added to flour dough, water redistribution among dough components promotes partial dehydration of gluten and collapse of β‐spirals into β‐sheet structures. This transconformational change may be the physical basis for the poor quality of bread containing added bran.