Species In sub-Saharan Africa Research Articles

Is there unrecognized potential in neglected livestock species in Sub-Saharan Africa? A systematic review of four selected species

AbstractOver the recent years, Sub-Saharan Africa (SSA) has seen an increase in population growth, urbanization, and per capita income. As a result, there has been a corresponding increase in the demand for animal source foods. In order to meet this demand, most countries have resorted to intensifying the production of conventional livestock. However, this increase in production comes with several environmental, nutritional, gender-related and economic challenges that are a rising concern. It is therefore imperative to explore the comparative advantages and disadvantages of other livestock species, which are currently consumed in SSA but are not recognised in widely adopted policies. Herein, using a novel conceptual framework, we present a systematic review of four selected neglected species, namely, grasscutter, guinea fowl, guinea pig, and rabbit. The review was conducted following the checklist for Preferred Reporting Items for Systematic Review and Meta-Analysis (PRISMA), and 89 sources of literature were included. The results highlight that embracing these neglected livestock species could confer several benefits, including an enriched nutritional profile (high-quality protein, low fat, high dressing percentage), increased gross economic returns, environmental sustainability, and sustained empowerment of minority groups, especially women. Overall, this review shows the untapped nutritional and socio-economic potential of neglected livestock species, which, if incorporated into mainstream production, could improve food security and reduce unemployment in SSA.

Evaluating rational and healthy use options for small pelagic fish species in sub-Saharan Africa

Evaluating rational and healthy use options for small pelagic fish species in sub-Saharan Africa

Genetic diversity of Plasmodium malariae in sub-Saharan Africa: a two-marker genotyping approach for molecular epidemiological studies.

Plasmodium malariae is the most common non-falciparum species in sub-Saharan Africa. Despite this, data on its genetic diversity is scarce. Therefore, we aimed to establish a P. malariae genotyping approach based on size polymorphic regions that can be easily applied in molecular epidemiological studies. Four potential genotyping markers, Pm02, Pm09, P. malariae thrombospondin-related anonymous protein (pmtrap), and P. malariae merozoite surface protein fragment 2 (pmmsp1 F2) were amplified via nested PCR and analysed using automated capillary gel electrophoresis. We observed the highest allelic diversity for pmtrap (MOI = 1.61) and pmmsp1 F2 (He = 0.81). Further applying the two markers pmtrap and pmmsp1 F2 on a different sample set of 21 P. malariae positive individuals followed up over one week, we saw a high consistency in their performance. The results show a large complexity and high dynamics of P. malariae infections in the asymptomatic Gabonese study population. We successfully implemented a new genotyping panel for P. malariae consisting of only two markers: pmtrap and pmmsp1 F2. It can be easily applied in other settings to investigate the genotype diversity of P. malariae populations, providing further important data on the molecular epidemiology of this parasite species.

Simian immunodeficiency virus and storage buffer: Field-friendly preservation methods for RNA viral detection in primate feces.

Simian immunodeficiency virus (SIV), which originated in African monkeys, crossed the species barrier into humans and ultimately gave rise to HIV and the global HIV/AIDS epidemic. While SIV infects over 40 primate species in sub-Saharan Africa, testing for RNA viruses in wild primate populations can be challenging. Optimizing field-friendly methods for assessing viral presence/abundance in non-invasively collected biological samples facilitates the study of viruses, including potentially zoonotic viruses, in wild primate populations. This study compares SIV RNA preservation and recovery from non-human primate feces stored in four different buffers. Our results will inform future fieldwork and facilitate improved approaches to characterizing prevalence, shedding, and transmission of RNA viruses like SIV in natural hosts including wild-living non-human primates.

Twenty-nine years of continuous monthly capture-mark-recapture data of multimammate mice (Mastomys natalensis) in Morogoro, Tanzania

The multimammate mice (Mastomys natalensis) is the most-studied rodent species in sub-Saharan Africa, where it is an important pest species in agriculture and carrier of zoonotic diseases (e.g. Lassa virus). Here, we provide a unique dataset that consists of twenty-nine years of continuous monthly capture-mark-recapture entries on one 3 ha mosaic field (MOSA) in Morogoro, Tanzania. It is one of the most accurate and long-running capture-recapture time series on a small mammal species worldwide and unique to Africa. The database can be used by ecologists to test hypotheses on the population dynamics of small mammals (e.g. to test the effect of climate change), or to validate new algorithms on real long-term field data (e.g. new survival analyses techniques). It is also useful for both scientists and decision-makers who want to optimize rodent control strategies and predict outbreaks of multimammate mice.

Historical demography and climatic niches of the Natal multimammate mouse (Mastomys natalensis) in the Zambezian region

The Natal multimammate mouse (Mastomys natalensis) is the most widespread rodent species in sub-Saharan Africa, often studied as an agricultural pest and reservoir of viruses. Its mitochondrial (Mt) phylogeny revealed six major lineages parapatrically distributed across open habitats of sub-Saharan Africa. In this study we used 1949 sequences of the mitochondrial cytochrome b gene to elaborate on distribution and evolutionary history of three Mt lineages inhabiting the open habitats of the Zambezian region (corresponding roughly to the African savannas south of the Equator). We describe in more detail contact zones between the lineages—their location and extent of co-occurrence within localities—and infer past population trends. The estimates are interpreted in the light of climatic niche models. The lineages underwent reduction in effective population size during the last glacial, but they spread widely after that: two of them after the last glacial maximum and the last one in mid-Holocene. The centers of expansion, i.e., possible long-term savanna refugia, were estimated to lie close to the Eastern Arc Mountains and lakes of the Great African Rift, geomorphological structures likely to have had long-term influence on geographical distribution of the lineages. Environmental niche modeling shows climate could also affect the broad scale distribution of the lineages but is unlikely to explain the narrow width of the contact zones. The intraspecific Mt differentiation of M. natalensis echoes phylogeographic patterns observed in multiple co-distributed mammal species, which suggests the mammal communities in the region are shaped by the same long-term processes.

Diel niche variation in mammalian declines in the Anthropocene

Biodiversity is being eroded worldwide. Many human pressures are most forcefully exerted or have greatest effect during a particular period of the day. Therefore when species are physically active (their diel niche) may influence their risk of population decline. We grouped 5032 terrestrial extant mammals by their dominant activity pattern (nocturnal, crepuscular, cathemeral and diurnal), and determine variation in population decline across diel niches. We find an increased risk of population decline in diurnal (52.1% of species), compared to nocturnal (40.1% of species), crepuscular (39.1% of species) and cathemeral (43.0% of species) species, associated with the larger proportion of diurnal mammals that are primates. Those species with declining populations whose activity predominantly coincides with that of humans (cathemeral, diurnal) face an increased number of anthropogenic threats than those principally active at night, with diurnal species more likely to be declining from harvesting. Across much of the land surface habitat loss is the predominant driver of population decline, however, harvesting is a greater threat to day-active species in sub-Saharan Africa and mainland tropical Asia, associated with declines in megafauna and arboreal foragers. Deepening understanding of diel variation in anthropogenic pressures and resulting population declines will help target conservation actions.

Human Consumption of Insects in Sub-Saharan Africa: Lepidoptera and Potential Species for Breeding.

Simple SummaryIn the developing countries of sub-Saharan Africa, there is currently growing interest in the consumption of Lepidoptera larvae by humans, due to the important role they play in food security and poverty alleviation. In order to consider Lepidoptera larvae as sustainable alternative protein food, it is important to study the possibility of breeding the species of food interest. A previous literature review on Lepidoptera larvae consumed in Africa revealed a paucity of information on the bioecology of most species and examples of sustainable edible caterpillar rearing practices. This is not surprising given that most research focuses on aspects related to their consumption and nutritional composition. The aim of this work is to collect data on some aspects on their biology, their food plants and provide a guide to orientate the choice of species to raise. In addition, studies on the bioecology and husbandry of edible caterpillars should be more carried out for a sustainable and rational exploitation.There are 472 edible insect species in sub-Saharan Africa, of which 31% are Lepidoptera. Wild harvesting is still the main source of supply for these prized species to this day, with some harvesting techniques negatively impacting the environment. The successful production of edible caterpillars requires the appropriate and efficient implementation of husbandry techniques and practices. In this review, we present current literature on edible caterpillars. We provide a general overview of their life history, nutritional composition, and availability associated with specific host plants, with emphasis on semi-domestication and rearing practices that should replace wild harvest. Based on the assimilated information, a proposal of potential species for farming is provided, with details on key characteristics of development cycles to promote the establishment and development of sustainable farms of edible caterpillars at small and large scales. Such advances would contribute toward reducing anthropological pressure related to the exploitation of these food resources, as well as the environmental footprint of this widespread practice.

Climate change will disproportionally affect the most genetically diverse lineages of a widespread African tree species

Global climate change is proceeding at an alarming rate with major ecological and genetic consequences for biodiversity, particularly in drylands. The response of species to climate change may differ between intraspecific genetic groups, with major implications for conservation. We used molecular data from 10 nuclear and two chloroplast genomes to identify phylogeographic groups within 746 individuals from 29 populations of Senegalia senegal, a savannah tree species in sub-Saharan Africa. Three phylogroups are identified corresponding to Sudano-Sahelian, Zambezian and Southern African biogeographic regions in West, East and Southern Africa. Genetic diversity was highest in Southern and Zambesian and lowest in the Sudano-Sahelian phylogroups. Using species distribution modeling, we infer highly divergent future distributions of the phylogroups under three climate change scenarios. Climate change will lead to severe reductions of distribution area of the genetically diverse Zambezian (− 41–− 54%) and Southern (− 63–− 82%) phylogroups, but to an increase for the genetically depauperate Sudano-Sahelian (+ 7– + 26%) phylogroups. This study improves our understanding of the impact of climate change on the future distribution of this species. This knowledge is particularly useful for biodiversity management as the conservation of genetic resources needs to be considered in complementary strategies of in-situ conservation and assisted migration.

Effects of seed provenance, pre-treatment and mass on germinability and seedling growth of Balanites aegyptiaca (L.) Delile and Ricinodendron heudelotii (Bail.) Pierre in Benin (West Africa)

Balanites aegyptiaca (L.) Delile and Ricinodendron heudelotii (Bail.) Pierre are socioeconomically important species in sub-Saharan Africa. This study was conducted to assess the seed germinability and seedling growth of those species based on several treatments and to define proper conservation and domestication strategies in Benin. The seeds were randomly collected in their natural habitats. The experiment was conducted using a split-split plot design and the data was analyzed using the generalized linear mixed and survival models. The heaviest seeds (B. aegyptiaca seed mass ≥3 g and R. heudelotii ≥ 1.50 g) provided the highest germination rates (73.60 ± 5.19% and 62.50 ± 5.71%, respectively) when seeds were scarified with a hammer. For B. aegyptiaca seedlings, the seeds from the phytodistrict of North Borgou scarified with a hammer and the heaviest seeds showed the highest total height (36.43 ± 1.03 cm), basal diameter (2.84 ± 0.03 mm), the greatest number of leaves (32), and ramifications. The heaviest seeds of R. heudelotii had also the highest value for total height at the day-28 after sowing (26.73 ± 13.56 cm) until the day-105 (151.97 ± 6.37 cm). The heaviest seeds of R. heudelotii from the phytodistrict of Pobe showed the highest basal diameter (12.53 ± 1.47 mm) and the greatest number of leaves (14), with almost no ramification during the trial period. These findings constitute a step forward in upscaling the reproduction of these species for better contribution to economies while serving in restoration plans.

Impact of fertility versus mortality control on the demographics of Mastomys natalensis in maize fields.

The multimammate mouse, Mastomys natalensis, is the most common rodent pest species in sub-Saharan Africa. Currently, rodenticides are the preferred method used to reduce the population of rodent pests, but this method poses direct and indirect risks to humans and other non-target species. Fertility control is a promising alternative that has been argued to be a more sustainable and humane method for controlling rodent pests. In this study, we compared the effectiveness of fertility control bait EP-1 (quinestrol (E) and levonorgestrel (P), 10 ppm) and an anticoagulant rodenticide bait (bromadiolone, 50 ppm) on the population dynamics of M. natalensis in maize fields in Zambia during 2 cropping seasons. M. natalensis was the most abundant species in maize fields (77% of total captures). Fertility control reduced the number of juveniles and suppressed population growth of M. natalensis at the end of the 2019-2020 cropping season. The population density initially decreased after rodenticide treatment, but the population rapidly recovered through immigration. None of the treatments influenced maize damage by rodents at germination (F2,67 = 1.626, P = 0.204). Applying the treatments during the maize seeding time was effective at suppressing population growth at the end of the cropping season than application the month before maize seeding. This research indicates that a single-dose delivery of EP-1 and rodenticide have comparable effects on the population dynamics of M. natalensis. These findings are important in developing fertility control protocols for rodent pest populations to reduce maize crop damage and improve yields.

Prevalence of urogenital and intestinal schistosomiasis among school children in South-west Nigeria.

The risk of co-infection with Schistosoma haematobium and S. mansoni and the potential harmful effect on morbidity and control is enhanced by the overlapping distribution of both species in sub-Saharan Africa. Despite the reported high endemicity of both species in Nigeria, studies on the spread and effect of their mixed infection are limited. Therefore, a cross-sectional survey was conducted among school children in two communities in South-west Nigeria to investigate the prevalence of mixed human schistosome infection, intensity, and possible ectopic egg elimination. Urine and stool samples were collected from consenting school children in Ilie and Ore communities of Osun State, Nigeria. Schistosoma haematobium eggs were detected in urine using the urine filtration technique, while S. mansoni eggs were detected in stool using the Kato-Katz thick smear technique. The study enrolled 466 primary and secondary school children (211; 45.3% males vs. 255; 54.7% females; mean age 11.6 ± 3.16 years). The overall prevalence of schistosomiasis was 40% (185/466), with 19% (89/466) recording single S. haematobium infection while 9% (41/465) had a single S. mansoni infection. The geometric mean egg count for S. haematobium was 189.4 egg/10ml urine; 95% CI: range 115.9-262.9, while for S. mansoni, it was 115.7 epg; 95% CI: range 78.4-152.9. The prevalence of ectopic S mansoni (S. mansoni eggs in urine) was 4.7%, while no ectopic S. haematobium (S. haematobium eggs in stool) was recorded. Mixed infection of S. haematobium/S. mansoni had a prevalence of 9.5% (44/466). More females (54.5%) presented with S. haematobium/S. mansoni co-infection. For both parasites, males had higher infection intensity, with a significant difference observed with S. haematobium (p = 0.0004). Hematuria was significant in individuals with single S. haematobium infection (p = 0.002), mixed ectopic S. haematobium/S. mansoni (p = 0.009) and mixed S. haematobium/S. mansoni/ectopic S. mansoni (p = 0.0003). These findings suggest the probability of interspecific interactions between S. haematobium and S. mansoni. Scaling up of mass administration of praziquantel and control measures in the study areas is highly desirable.

Synthetic seeds and their role in agriculture: status and progress in sub-Saharan Africa

Dicot seeds are commonly characterised by the rapid loss of moisture, vigour and longevity that cause adverse physiological and biochemical effects. Such changes reduce seed viability, germinability and seedling vigour in most agronomic legume crops. Thus, this paper evaluates the potential role of synthetic seed production as an avenue to achieve genetic variability, avert recalcitrance and fleet seed viability challenges experienced in recalcitrant legume species. Synthetic seeds, also known as synseeds or artificial seeds produced via somatic embryogenesis are crucial for the successful establishment of plants, and serve as an important determinant of plant productivity, especially for crops such as soybean. The potential use of synseeds could serve a fundamental role in ensuring cheap and rapid supply of new genetic resources and seed propagules for both breeders and farmers. This approach will ultimately maximise crop yield and offer a tremendous potential for micropropagation and germplasm preservation of recalcitrant species in sub-Saharan Africa. This review reports on a variety of applications and benefits of plant biotechnology in the African context and highlights important advantages such as genetic uniformity, simplified handling, storage, efficient distribution etc. that could be of immeasurable benefit to the seed value chain in agriculture, particularly for rural communities in these developing countries.

Evolutionary relationships, biogeography and morphological characters of Glinus (Molluginaceae), with special emphasis on the genus composition in Sub-Saharan Africa.

Glinus is a small genus of Molluginaceae with 8–10 species mostly distributed in the tropics of the World. Its composition and evolutionary relationships were poorly studied. A new molecular phylogeny constructed here using nuclear (ITS) and chloroplast (rbcL, trnK-matK) markers confirmed the monophyly of the genus. Based on ITS analysis, the following well-supported lineages are present within Glinus: the G. bainesii lineage is recovered as sister to the remainder of the genus followed by G. oppositifolius. Three other clades are: G. hirtus with G. orygioides; G. radiatus and G. lotoides; the latter is represented by a sample from North America, and G. zambesiacus as sister to G. setiflorus + G. lotoides + G. dictamnoides. On the plastid gene tree, G. bainesii + G. oppositifolius form a sister clade to all other Glinus species. The next clade is formed by G. hirtus and G. orygioides followed by G. radiatus plus an American sample of G. lotoides. The next branch comprises G. setiflorus as sister to G. zambesiacus + G. lotoides + G. dictamnoides. Glinus seems to have originated from Africa around the Late Eocene or Early Miocene, with further radiations to Australia and the Americas during the Late Miocene or Late Pliocene. Compared with the previous limited character set used for the diagnostics, we have found ten new morphological and carpological traits distinguishing Glinus members. In both trees based on nuclear and plastid datasets, the major phylogenetic clades cannot be characterized by the peculiar morphological characters. Many shared character states leading to their contrasting pattern in the multivariate analysis model are interpreted as a high homoplasy in the phylogenetically distant species. We paid special attention to the composition of the genus in Sub-Saharan Africa, a region with the greatest species diversity. Our results provide new insight into the taxonomy of Glinus in this region. Glinus lotoides var. virens accepted in many previous works is a synonym of G. dictamnoides that is closely related to G. lotoides based on molecular analysis and morphological characters. The status of the American populations of G. lotoides needs further investigation due to different characters of the specimens from the Old and the New World. Many specimens previously identified as G. lotoides var. virens and as the intermediates G. lotoides × G. oppositifolius belong to G. zambesiacussp. nov. and G. hirtuscomb. nov. (≡ Mollugo hirta); the latter species is resurrected from synonymy after 200 years of unacceptance. In some African treatments, G. hirtus was known under the invalidly published name G. dahomensis. Glinus zambesiacus is distributed in the southern and eastern parts of tropical Africa, and G. hirtus previously assumed to be endemic to West Africa is indeed a species with a wide distribution across the tropical part of the continent. Glinus microphyllus previously accepted as endemic to West Tropical Africa together with other new synonyms (G. oppositifolius var. lanatus, G. herniarioides, Wycliffea rotundifolia) is considered here as G. oppositifolius var. keenaniicomb. nov. (≡ Mollugo hirta var. keenanii), a variety found across the entire distribution of G. oppositifolius (Australia, Asia, and Africa). The presence of the American G. radiatus in Africa is not confirmed, and all records of this species belong to G. hirtus. The lectotypes of some names (G. dictamnoides, G. herniarioides, Mollugo hirta, M. setiflora, Pharnaceum pentagynum, Wycliffea) as well as a neotype of G. trianthemoides are designated. A new key to the identification of all Glinus species in Sub-Saharan Africa is provided. A checklist is given of all accepted species in this region (G. bainesii, G. hirtus, G. lotoides, G. oppositifolius s.l., G. setiflorus, and G. zambesiacus) with their nomenclature, morphological description and geographical distribution.

Meloidogyne enterolobii, a threat to crop production with particular reference to sub-Saharan Africa: an extensive, critical and updated review

Summary Crop damage inflicted by Meloidogyne enterolobii justifies an updated literature review focusing on recent discoveries about its identification, biology and management. Since its description in 1983, M. enterolobii has become a pest of great concern, particularly due to its virulence, which renders controlling this nematode pest a challenge. The global distribution of M. enteroblii is summarised, with emphasis placed on limited research done for the species in sub-Saharan Africa where food production and security is threatened by root-knot nematode parasitism. Novel advances in methods used to detect M. enterolobii are touched upon, especially the improvement in advanced molecular techniques that complements shortcomings in morphology and morphometic approaches. Despite these exciting developments, the employment of effective management strategies to combat the species remains problematic. Future research on various aspects of M. enterolobii is crucial, with focus to be placed on the use of available resources to contain damage caused by this species.

Geographically structured genomic diversity of non-human primate-infecting Treponema pallidum subsp. pertenue.

Many non-human primate species in sub-Saharan Africa are infected with Treponema pallidum subsp. pertenue , the bacterium causing yaws in humans. In humans, yaws is often characterized by lesions of the extremities and face, while T. pallidum subsp. pallidum causes venereal syphilis and is typically characterized by primary lesions on the genital, anal or oral mucosae. It remains unclear whether other T. pallidum subspecies found in humans also occur in non-human primates and how the genomic diversity of non-human primate T. pallidum subsp. pertenue lineages is distributed across hosts and space. We observed orofacial and genital lesions in sooty mangabeys (Cercocebus atys) in Taï National Park, Côte d’Ivoire and collected swabs and biopsies from symptomatic animals. We also collected non-human primate bones from 8 species in Taï National Park and 16 species from 11 other sites across sub-Saharan Africa. Samples were screened for T. pallidum DNA using polymerase chain reactions (PCRs) and we used in-solution hybridization capture to sequence T. pallidum genomes. We generated three nearly complete T. pallidum genomes from biopsies and swabs and detected treponemal DNA in bones of six non-human primate species in five countries, allowing us to reconstruct three partial genomes. Phylogenomic analyses revealed that both orofacial and genital lesions in sooty mangabeys from Taï National Park were caused by T. pallidum subsp. pertenue . We showed that T. pallidum subsp. pertenue has infected non-human primates in Taï National Park for at least 28 years and has been present in two non-human primate species that had not been described as T. pallidum subsp. pertenue hosts in this ecosystem, western chimpanzees (Pan troglodytes verus) and western red colobus (Piliocolobus badius), complementing clinical evidence that started accumulating in Taï National Park in 2014. More broadly, simian T. pallidum subsp. pertenue strains did not form monophyletic clades based on host species or the symptoms caused, but rather clustered based on geography. Geographical clustering of T. pallidum subsp. pertenue genomes might be compatible with cross-species transmission of T. pallidum subsp. pertenue within ecosystems or environmental exposure, leading to the acquisition of closely related strains. Finally, we found no evidence for mutations that confer antimicrobial resistance.

Does land use type impact the demographic and spatial structures of Adansonia digitata L. in the Pendjari Biosphere Reserve in Northern Benin?

Changes in land use type (LUT) are a major driver of biodiversity loss and species decline. Responses to changes in LUT are species-specific, which may in turn be context-dependent. Understanding such responses is essential for the management of socio-economically important wild tree species. The baobab, Adansonia digitata L., is an important traditional agroforestry tree species in Sub-Saharan Africa. This study assesses how LUT affects the demographic and spatial structure of baobab stands. Using data from a census and mapping of baobab trees in 12 plots of 250 m × 250 m each, the study compared baobab tree density, total height and diameter, diameter size-class distribution (SCD), stand stability, and spatial relationships in a strictly protected area (national park), a buffer zone and farmlands (Matéri and Boukombé) in the Pendjari Biosphere Reserve in Benin. The results show that the highest young and adult tree densities are in farmlands (particularly in Matéri), followed by the buffer zone and the national park. No significant differences in tree diameter and total height of baobab trees were found among the different LUT. The SCD had a reverse J-shape with a better negative slope and population stability metrics in farmlands (particularly in Matéri) but a flattened slope in the buffer zone. The spatial distributions of juvenile and adult baobab trees were random, and independent of each other. The spatial distribution of juvenile and adult baobabs was also independent of the other tree species, irrespective of LUT. It was concluded that baobab conservation is better in farmlands than in the national park but that the difference between park and farmlands may be context-dependent, probably linked to local environmental conditions, the socio-ecological context and interactions with baobab trees.

Sero-prevalence, cross-species infection and serological determinants of prevalence of Bovine Coronavirus in Cattle, Sheep and Goats in Ghana

Cattle, goats and sheep are dominant livestock species in sub-Saharan Africa, with sometimes limited information on the prevalence of major infectious diseases. Restrictions due to notifiable epizootics complicate the exchange of samples in surveillance studies and suggest that laboratory capacities should be established domestically. Bovine Coronavirus (BCoV) causes mainly enteric disease in cattle. Spillover to small ruminants is possible. Here we established BCoV serology based on a recombinant immunofluorescence assay for cattle, goats and sheep, and studied the seroprevalence of BCoV in these species in four different locations in the Greater Accra, Volta, Upper East, and Northern provinces of Ghana. The whole sampling and testing was organized and conducted by a veterinary school in Kumasi, Ashanti Region of Ghana. Among sampled sheep (n = 102), goats (n = 66), and cattle (n = 1495), the seroprevalence rates were 25.8 %, 43.1 % and 55.8 %. For cattle, seroprevalence was significantly higher on larger farms (82.2 % vs 17.8 %, comparing farms with >50 or <50 animals; p = 0.027). Highest prevalence was seen in the Northern province with dry climate, but no significant trend following the north-south gradient of sampling sites was detected. Our study identifies a considerable seroprevalence for BCoV in Ghana and provides further support for the spillover of BCoV to small ruminants in settings with mixed husbandry and limited separation between species.

Modelled effects of prawn aquaculture on poverty alleviation and schistosomiasis control.

Recent evidence suggests that snail predators may aid efforts to control the human parasitic disease schistosomiasis by eating aquatic snail species that serve as intermediate hosts of the parasite. Potential synergies between schistosomiasis control and aquaculture of giant prawns are evaluated using an integrated bio-economic-epidemiologic model. Combinations of stocking density and aquaculture cycle length that maximize cumulative, discounted profit are identified for two prawn species in sub-Saharan Africa: the endemic, non-domesticated Macrobrachium vollenhovenii, and the non-native, domesticated Macrobrachium rosenbergii. At profit maximizing densities, both M. rosenbergii and M. vollenhovenii may substantially reduce intermediate host snail populations and aid schistosomiasis control efforts. Control strategies drawing on both prawn aquaculture to reduce intermediate host snail populations and mass drug administration to treat infected individuals are found to be superior to either strategy alone. Integrated aquaculture-based interventions can be a win-win strategy in terms of health and sustainable development in schistosomiasis endemic regions of the world.

Two new species of Amanitasect.Phalloideae from Africa, one of which is devoid of amatoxins and phallotoxins.

Two new species of Amanitasect.Phalloideae are described from tropical Africa (incl. Madagascar) based on both morphological and molecular (DNA sequence) data. Amanitabweyeyensissp. nov. was collected, associated with Eucalyptus, in Rwanda, Burundi and Tanzania. It is consumed by local people and chemical analyses showed the absence of amatoxins and phallotoxins in the basidiomata. Surprisingly, molecular analysis performed on the same specimens nevertheless demonstrated the presence of the gene sequence encoding for the phallotoxin phallacidin (PHA gene, member of the MSDIN family). The second species, Amanitaharkonenianasp. nov. was collected in Tanzania and Madagascar. It is also characterised by a complete PHA gene sequence and is suspected to be deadly poisonous. Both species clustered together in a well-supported terminal clade in multilocus phylogenetic inferences (including nuclear ribosomal partial LSU and ITS-5.8S, partial tef1-α, rpb2 and β-tubulin genes), considered either individually or concatenated. This, along with the occurrence of other species in sub-Saharan Africa and their phylogenetic relationships, are briefly discussed. Macro- and microscopic descriptions, as well as pictures and line drawings, are presented for both species. An identification key to the African and Madagascan species of Amanitasect.Phalloideae is provided. The differences between the two new species and the closest Phalloideae species are discussed.