Forest Species Research Articles

How dominant height responds to mixing species: Effect of traits and height difference between species

Adapting forests to climate change is a major challenge for forest ecology and forestry. Among the management options available, encouraging the use of mixtures is a promising way forward. However, this practice requires a thorough understanding of how species respond to mixing. In this article, we analyzed species dominant height responds to mixing and how species ontogeny and traits drive this response. We compared species observed dominant height in mixed even-aged stands with the expected dominant height of the same species in a monospecific stand under the same environmental conditions. We then related this dominant height variation due to mixing to between-species dominant height difference and to species traits linked to competition (shade tolerance, wood density, specific leaf area).We focused our analyses on 76 pairs of forest tree species. We used data from the French National Forest Inventory to calculate species dominant height in 1368 mixed stands. We then used previously developed models to estimate the expected dominant height in virtual monospecific stands with the same environmental conditions.We found that mixture had a significant impact on species dominant height for 15 out of 50 species-combination considered. Dominant height of a given species was higher in mixture than in pure stands when this species had a lower dominant height in pure stands, a lower shade tolerance, a lower specific leaf area or a higher wood density than its companion species.Our results suggest that species dominant height response to mixing depends on how mixture influences the competition for light. Our results will help inform strategies aiming to diversify species in forests, and will be especially useful in anticipating a given species’ behavior in response to competition for light when it is mixed with other species.

Morphological characters and molecular data reveal ten new forest macrofungi species from Hebei Province, North China

ABSTRACT China has a complex and diverse forest ecological environment, which breeds abundant forest macrofungi, including some edible, medicinal, and poisonous species. During the investigations of macrofungi in the Saihanba National Nature Reserve, North China, we collected abundant specimens of Agaricales and Polyporales within the Agaricomycetes. Based on the morphological characters and molecular evidence of DNA sequences including the internal transcribed spacer (ITS) regions, the large subunit of nuclear ribosomal RNA gene (nLSU), the small subunit of mitochondrial rRNA gene (mtSSU), the small subunit of nuclear ribosomal RNA gene (nuSSU), the largest subunit of RNA polymerase II (RPB1), the second largest subunit of RNA polymerase II gene (RPB2), the β-tubulin gene (TUB), and the translation elongation factor 1-α gene (TEF1), this study identifies ten species of Agaricales and Polyporales new to science, viz. Cyanosporus subpopuli, Gelatinofungus betulina, Lycoperdon pseudoperlatum, Macrocystidia hebeiensis, Mycena subbrunnea, M. subpura, M. variispora, M. violocea-ardesiaca, Picipes griseus, and Pleuroflammula hebeiensis. Detailed morphological descriptions, fruiting bodies, and microscopic structure diagrams of these ten novel species are provided.

Utilization of Forest Residues for Cellulose Extraction from Timber Species in the High Montane Forest of Chimborazo, Ecuador

The present study explored the extraction of cellulose from forest residues of four timber species, namely Cedrela montana Moritz ex Turcz, Buddleja incana Ruiz & Pav, Vallea stipularis L. f. and Myrsine andina (Mez) Pipoly, in the high montane forest of Chimborazo province, Ecuador, for the sustainable utilization of leaves, branches, and flowers. An alkaline extraction method was used on the residues without the need for prior degreasing. An ANOVA analysis was applied to evaluate significant differences in cellulose extraction yields among the species’ residues. The characterization techniques used were Fourier transform infrared spectroscopy (FTIR) and polarized light optical microscopy, which confirmed the successful extraction of cellulose with characteristics comparable to standard cotton cellulose and other traditional species. The results showed significant variations in cellulose yield among the species, with Vallea stipularis L. f achieving the highest yield of 80.83%. The crystallinity of the samples was clearly evidenced by the polarity of the light in the samples during microscopy, demonstrating that the residues can be a viable and sustainable source of cellulose, contributing to a circular economy and reducing the environmental impact of forest waste.

Temporal dynamics of acoustic diversity in managed forests

IntroductionIn production forests, management can have cascading effects on biodiversity and ecosystem services. Acoustic diversity reflects the diversity of vocalizing animals and has also considerable recreational value for human well-being, but the relationship between acoustic diversity and forest management remains largely unexploredMethodWe recorded acoustic diversity on forest plots along a gradient of silvicultural management intensity (SMI) in three regions of Germany. We explored the diurnal and seasonal temporal dynamics in acoustic diversity index (ADI) from March to July using generalized additive mixed models (GAMMs). We further investigated the interrelation between acoustic diversity and silvicultural management intensity, forest structural diversity, as well as tree diversity, bird species richness and abundance using structural equation modeling (SEM).ResultsSilvicultural management intensity had significant effects on the temporal dynamics of ADI in May and June from dawn till dusk, but variance explained by SMI was low. We confirmed our hypothesis that ADI was reduced by SMI due to its cascading effects on forest structural diversity and bird species richness and abundance.DiscussionAcoustic diversity indices can provide valuable insights into how forest management affects the acoustic activity of soniferous communities. We discuss how this can indicate both changes in species diversity as well as their vocal activity. We further address potential implications for forest management.

Silicon Modifies Photosynthesis Efficiency and hsp Gene Expression in European Beech (Fagus sylvatica) Seedlings Exposed to Drought Stress.

Background: Climate change is leading to severe and long-term droughts in European forest ecosystems. can have profound effects on various physiological processes, including photosynthesis, gene expression patterns, and nutrient uptake at the developmental stage of young trees. Objectives: Our study aimed to test the hypothesis that the application of silica (SiO2) influences photosynthetic efficiency and gene expression in 1- to 2-year-old Fagus sylvatica (L.) seedlings. Additionally, we aimed to assess whether silicon application positively influences the structural properties of leaves and roots. To determine whether the plant physiological responses are genotype-specific, seedlings of four geographically different provenances were subjected to a one-year evaluation under greenhouse conditions. Methods: We used the Kruskal-Wallis test followed by Wilcoxon's test to evaluate the differences in silicon content and ANOVA followed by Tukey's test to evaluate the physiological responses of seedlings depending on treatment and provenance. Results: Our results showed a significantly higher Si content in the roots compared with the leaves, regardless of provenance and treatment. The most significant differences in photosynthetic performance were found in trees exposed to Si treatment, but the physiological responses were generally nuanced and provenance-dependent. Expression of hsp70 and hsp90 was also increased in leaf tissues of all provenances. These results provide practical insights that Si can improve the overall health and resilience of beech seedlings in nursery and forest ecosystems, with possible differences in the beneficial role of silicon application arising from the large differences in wild populations of forest tree species.

Genomic diversity of major tree species in the Eurasian relict forests of northern Iran

We investigated population genetics of the native tree species Acer velutinum Boiss., Fagus orientalis Lipsky, and Quercus castaneifolia C.A. Mey. in the Hyrcanian forests of northern Iran and also F. orientalis populations in the Euro-Siberian and Colchic subregions of northern Türkiye. We used the double-digest RADseq method and genotyped 90 populations and 1,589 individuals across the distribution range of the species. Genome-wide SNPs from 28 populations of A. velutinum, 32 populations of F. orientalis, and 30 Q. castaneifolia revealed higher genetic differentiation among A. velutinum populations than among F. orientalis and Q. castaneifolia. The global FST value was lowest for F. orientalis populations and highest for A. velutinum populations, while the global FIS value was negative for A. velutinum. Demographic history analysis revealed a bottleneck during the last glacial period (11,500—115,000 Kya) for the A. velutinum populations with reduced effective population size (Ne). All three species show multiple bottlenecks and reduced Ne during the Quaternary. Pronounced genetic divergence among A. velutinum populations in the Hyrcanian forests compared to the other two species suggests cryptic speciation. Conversely, F. orientalis and Q. castaneifolia populations showed low levels of genetic structure, suggesting that species-specific factors, such as pollen production and pollination efficiency, may have influenced the genetic patterns within these species in similar environments. The nucleotide diversity of F. orientalis populations in Iran is negatively correlated with altitude (p = 0.046). In contrast, A. velutinum populations show a significant correlation between nucleotide diversity and longitude (p = 0.008). Furthermore, the F. orientalis populations from Türkiye showed a distinct west–east genetic structure and were highly diverged from the Iranian F. orientalis populations.

Vegetation Structure, Composition and Plant Community types in Tropical Dry Deciduous Forests of Jaipur, Rajasthan, India

The research was carried out in the Aravalli Forests of Nahargarh (NWLS) and Jamwa Ramgarh Wildlife Sanctuaries (JRWLS) of Jaipur, Rajasthan, India. The vegetation structure, composition, biodiversity and plant community types were assessed across the five forest stands viz Nahargarh biological park (S1), Nahargarh Sanctuary (S2) in NWLS and Ramgarh (S3), Raisar (S4), and Digota (S5) of JRWLS, respectively. A total of 164 qaudrats of 20*20 m2 were laid to assess the vegetation data including frequency, basal area, density, importance value index (IVI), biodiversity indices (Shannon-weiner, Simpson, Pielou and Margalef’s) and plant community types. The tree basal area ranged between 18.56 -34.36 m2/ha while stand density was 923-1433 tree/ha. Our study indicated the dominance of family Fabaceae with 20 species and 11 genera with Anogeissus pendula showing the maximum frequency, density, mean basal area and IVI. Further, the agglomerative hierarchal clustering showed five types of plant communities with Anogeissus-Adhatoda as the most widely spread community in these forests. Among the two sanctuaries, species diversity was higher for JRWLS (2.83) than NWLS (2.80). The current study provides important baseline data for forthcoming research on monitoring and preserving these forest’s biological diversity. The significance of present study will provide insight into the structure and variety of tree species in tropical dry deciduous forests.

A broad analysis of vegetative rescue and propagation of Moquiniastrum polymorphum (Less.) G. Sancho

Background: The primary method for propagating forest species is through seeds, which is cost-effective and ensures genetic adaptability to environmental changes. However, germination issues and genetic variability can hinder standardisation of productivity. In the case of Moquiniastrum polymorphum, a species known for its remarkable wood quality and pharmacological potential, seedling production and genetic improvement efforts have been limited. This study focused on the rescue and vegetative propagation of M. polymorphum, which are crucial steps for species selection and genetic enhancement. Methods: Protocols were tested to rescue and propagate propagules from different individuals collected in Lages, Santa Catarina (2020/2022). The vegetative rescue tests were: (I) epicormic sprouting induction through girdling techniques and detached branches; and (II) influence of individuals, disposition sense and time on the epicormic sprouting of detached branches. Vegetative propagation analyses included: (I) cutting according to individuals; and (II) relation between rooting environments and individuals on cutting. Results: The results indicated that the girdling techniques were not efficient for vegetative rescue, as only 8% of individuals produced epicormic sprouts. In contrast, detached branches showed a much higher success rate of 80% for epicormic sprouting, revealing significant differences in sprout development among individuals over time. Vertically oriented branches produced nearly three times more sprouts compared to horizontally oriented branches. Regarding vegetative propagation, certain individuals exhibited remarkable rooting rates of over 75%. However, no conclusive results were obtained when using epicormic materials or when considering different rooting environments. Conclusions: Given the significance of rescue and vegetative propagation in plant genetic improvement and the limited research addressing these aspects in M. polymorphum, this study holds substantial importance for future investigations. It is recommended to expand rescue and vegetative propagation studies to encompass additional populations, different individuals, and rooting environments, further advancing our understanding and efforts to enhance this species.

Low altitude Vaccinium myrtillus L. populations in the Eșelnița Valley (Danube Gorge, Carpathian Mountains, Romania)

The presence of certain species in habitats and at altitudes different from their usual ecological requirements has great biogeographic importance. Such a situation was identified in 2023 on the middle and lower course of Eșelnița Valley, a Danube tributary in the Carpathian Mountains in southwestern Romania. Thus, in Eșelnița Valley, we identified Vaccinium myrtillus and Calluna vulgaris species in beech forests at low altitudes. The lowest altitude with V. myrtillus in Eșelnița Valley was 198 m (approximately 5 km upstream from the Danube). On Eșelnița Valley, other species related to mountain areas are also present at low altitudes, favored by the narrow shape and the cooler microclimate of the valley.

Development of a protocol for the micropropagation of two forest species threatened with extinction in Ecuador

Development of a protocol for the micropropagation of two forest species threatened with extinction in Ecuador

Ongoing transmission of onchocerciasis in the Pru District of Ghana after two decades of mass drug administration with ivermectin and comparative identification of members of the Simulium damnosum complex using cytological and morphological techniques

Background Human onchocerciasis remains a public health problem in Ghana. Mass drug administration (MDA) with ivermectin (IVM) has reduced disease morbidity and prevalence, but the transmission of onchocerciasis remains ongoing in several endemic foci. We investigated parasite transmission in some endemic communities in Ghana that had received > 18 rounds of annual MDA with IVM and determined the species composition of black fly (Simulium damnosum) vectors in these areas.MethodsAdult female black flies were collected using human landing catches and identified as either forest or savanna species using morpho-taxonomic keys. The adult flies underwent dissection to determine their parity and detect any O. volvulus larvae, followed by the calculation of entomological indices. Simulium damnosum s.l. larvae were collected and preserved in freshly prepared Carnoy’s fixative and were later used for cytotaxonomic studies.ResultsA total of 9,983 adult flies were caught: 6,569 and 3,414 in the rainy and dry seasons respectively. Black fly biting activities over the study period showed bimodal or trimodal patterns. The highest monthly biting rate (MBR) of 10,578.75 bites/person/month was recorded in July in Beposo, while the highest monthly transmission potential of 100.69 infective bites/person/month was recorded in Asubende in August. Morphological analysis of 2,032 flies showed that 99.8% (2,028) of the flies were savanna species, with only 4 (0.2%) adult flies being of the forest species. Cytogenetic studies on 114 black fly larvae revealed three cytospecies (Simulium damnosum s.s., S. sirbanum and S. sanctipauli) in the study area.ConclusionsThe present studies confirmed an ongoing transmission of onchocerciasis in the study communities except Abua-1. It also provides further information on biting behaviors and onchocerciasis transmission indices in the study communities. Further, our data confirmed the savanna species (S. damnosum s.s. and S. sirbanum) of the S.damnosum s.l. to be the major vectors of onchocerciasis in the study areas, with only an occasional influx of forest cytotypes.Graphical

Spatio-Temporal Variations of Volatile Metabolites as an Eco-Physiological Response of a Native Species in the Tropical Forest.

This study evaluates the essential oil (EO) composition of Piper rivinoides Kunth, a shrub native to the Brazilian tropical rainforest, across different plant parts and developmental phases. The aim was to explore the chemical diversity of EO and its reflection in the plant's ecological interactions and adaptations. Plant organs (roots, stems, branches, and leaves) at different developmental phases were subjected to hydrodistillation followed by chemical analysis using Gas Chromatography-Mass Spectrometry (GC-MS) and Gas Chromatography-Flame Ionization Detector (GC-FID). The results revealed a relevant variation in EO yield and composition among different plant parts and developmental phases. Leaves showed the highest yield and chemical diversity, with α-pinene and β-pinene as major constituents, while roots and stems were characterized by a predominance of arylpropanoids, particularly apiol. The chemical diversity in leaves increased with plant maturity, indicating a dynamic adaptation to environmental interactions. The study underscores the importance of considering the ontogeny of plant parts in understanding the ecological roles and potential applications of P. rivinoides in medicine and agriculture. The findings contribute to the overall knowledge of Piperaceae chemodiversity and ecological adaptations, offering insights into the plant's interaction with its environment and its potential uses based on chemical composition.

Tracing gender variation in traditional knowledge: participatory tools to promote conservation in a Quilombola community in Brazil

BackgroundBased on participatory research tools and analysis with a gender focus, we aim to identify the knowledge associated with native plants of the Atlantic Forest in one Quilombola community whose territory is juxtaposed with a protected area, in South Brazil.MethodsThrough the perception of the residents of the Quilombola community of São Roque, we classified the availability, harvesting intensity, abundance, and importance of fourteen plants native to the Atlantic Forest found in their territory. These fourteen plants were selected after initial interviews with a free listing of plants done with all adults (44 people), followed by plant collection and identification. A participatory workshop was built with the community to collect data through three activities: four-cell tool, environment matrix, and importance matrix. To identify the gender nuances in the knowledge within this community, all activities were separated into two groups based on the gender of the 22 participants (9 women and 13 men) and the researchers.ResultsThe species Pau-pra-tudo (Picrasma crenata), Quina (Coutarea hexandra), and Cipó-milome (Aristolochia triangularis) were similarly classified as important by both groups, which indicates the cultural and environmental relevance associated with them regardless of gender. The perceptions of other species were expressed differently between the groups, showing the variance of the ecological knowledge and the relationship between the sociocultural contexts of gender and the knowledge manifested. The final part of the workshop was a lecture given by two community experts about herbal medicines based on forest species found in the territory.ConclusionsBased on the multiple forms of results recorded in the workshop, we discuss the demand for inclusion of the traditional community in land management plans of environmental agencies, highlighting how individual characteristics, such as gender, can fill gaps in data about local biodiversity.

Mining Tailings Effects on Soil Quality and Performance of Two Native Species of Atlantic Forest: Implications for Restoration

Mining Tailings Effects on Soil Quality and Performance of Two Native Species of Atlantic Forest: Implications for Restoration

Seasonal and interspecific variations in the water uptake depth of trees in a moist cool-temperate mixed forest in Japan

ABSTRACT The water uptake depth of trees affects their overall water use and the water cycle of forest ecosystems. However, empirical data on the depth from which water is drawn are lacking for many moist forests. In this study, we estimated the water uptake depths of 24 coexisting tree species in a moist cool-temperate mixed forest in Japan using stable oxygen isotopes. Our goal was to clarify the factors influencing water uptake depth including season, species, slope position, and tree height under moist conditions. Water uptake depth was determined during three periods in which temperatures differed but soil moisture levels remained similar. Season was shown as one of the factors affecting water uptake depth, which was shallowest in August, when temperatures reached maximum values, and deepest during May, when temperatures were lowest. This seasonal variation is likely to be related to physiological processes such as increasing transpiration which leads to water uptake shifting to the water-rich shallow soil layer and/or activation of fine root production at the soil surface, where temperatures are high. Water uptake depth also varied with tree species, suggesting the occurrence of belowground resource segregation among moist forest tree species. Slope position and tree height did not affect water uptake depth. This study highlights the importance of considering temperature-driven physiological processes when examining water uptake depth in moist forests, which could have implications for predicting the responses of these ecosystems to climate change.

Methane concentration in the heartwood of living trees in a cold temperate mountain forest: variation, transport and emission.

Forest soils are the largest terrestrial sink of methane (CH4), but CH4 produced in tree trunks by methanogenic archaea and emitted into the atmosphere can significantly offset CH4 oxidation in the soil. However, our mechanistic understanding of CH4 accumulation in tree trunks, in relation to CH4 emission from the trunk surface, is still limited. We characterized temporal variations in the molar fraction of CH4 in the heartwood of trees ([CH4]HW) of four different species in a mountain forest and addressed the relationship between [CH4]HW and emission from the surface of the trunk (${F}_{CH_4}$), in connection with the characteristics of the wood. [CH4]HW measurements were made monthly for 15 months using gas-porous tubes permanently inserted into the trunk. [CH4]HW were above ambient CH4 molar fraction for all trees, lower than 100p.p.m. for seven trees, higher for the nine other trees and greater than 200,000p.p.m. (>20%) for two of these nine trees. [CH4]HW varied monthly but were not primarily determined by trunk temperature. Heartwood diffusive resistance for CH4 was variable between trees, not only due to heartwood characteristics but probably also related to source location. ${F}_{CH_4}$were weakly correlated with [CH4]HW measured a few days after. The resulting apparent diffusion coefficient was also variable between trees suggesting variations in the size and location of the CH4 production sites as well as resistance to gas transport within the trunk. Our results highlight the challenges that must be overcome before CH4 emissions can be simulated at the tree level.

Leaf functional traits and ecological strategies of common plant species in evergreen broad-leaved forests on Huangshan Mountain

Leaf functional traits and ecological strategies of common plant species in evergreen broad-leaved forests on Huangshan Mountain

A case study on the impact of coppicing on small mammal diversity: First evidence from the high Agri Valley in the Basilicata Region, Italy

Forestry seems to have a significant impact on the diversity and composition of forest small mammal communities. Coppicing is one of the most widely adopted silvicultural systems in Europe and its effect on the entire small mammals community remains unclear. Thus, our study aimed to preliminary assess the stand-level effect of different coppice woodland elements on community richness, focusing on forest small mammal species. Furthermore, a second aim was to assess the effect of these woodland stand elements on different small mammal taxonomic groups to evaluate possible differential responses within the community. We identified three different coppice age classes, and selected a total of 15 coppice-with-standards forest stands. Additionally, we collected data about understory shrub structure and composition. Fur samples were collected using the hair tube sampling method. We found a significant effect of the coppice age on the number of species detected in communities. Furthermore, we found a differential response between glirid and murid families, with glirid being positively affected by a higher shrub abundance, which is instead severely reduced by coppicing.

Bioinoculation Strategies for Enhanced Growth and Development of Economically Important Dalbergia latifolia Roxb

The present experiment was conducted to evaluate the plant growth properties of the native rhizospheric microflora of Dalbergia latifolia, an important medicinal, timber and biofuel plant. A systemic isolation, characterization and identification of rhizospheric soil, collected indigenously, initially produced 45 numbers of fungi and 3 numbers of bacteria. Both groups of organisms were characterized for their extracellular useful activity, especially phosphate solubilisation potential, and presented in terms of solubilisation index and solubilisation efficiency. Two fungi and two bacteria with good phosphate solubilization activity, along with NPK and organic manure, were selected and used in a pot culture experiment to promote the growth and development of Dalbergia latifolia under nursery conditions. Data recorded on 90 Days of plant growth exhibited the growth promotion of inoculated plants over control uninoculated experimental set. Results obtained on morphological and physiological growth parameters exhibited that the application of Aspergillus flavus followed by Burkholderia territorii + org. manure showed maximum shoot height and inoculation of Burkholderia anthina + Aspergillus sp. + NPK was significantly higher leaf area. Significantly longer root has been observed in Burkholderia territorii. However, a difference was observed in the number of leaves in Aspergillus flavus. + Org. manure and higher numbers of branches were observed in Aspergillus flavus only as compared to uninoculated control. Coinoculation of Aspergillus flavus + Penicillium simplicissimum showed better performance in fresh and dry shoot biomass as compared to other treatments. Burkholderia territorii + Org.manure produced higher fresh biomass of roots and coinoculation of bacteria Burkholderia territorii + Burkholderia anthina helped in enhancing root dry biomass. Dual inoculation of Aspergillus flavus + Penicillium simplicissimum gives better result in both fresh biomass of leaves and dry biomass of leaves. Application of Aspergillus flavus + Penicillium simplicissimum enhanced the total fresh biomass of the seedlings whereas supplementation of Burkholderia anthina + Penicillium simplicissimum enhanced the total dry biomass. Coinoculation of Aspergillus flavus + Penicillium simplicissimum showed higher RGR and coinoculation of Burkholderia anthina + Aspergillus flavus + NPK showed quite higher Leaf area ratio (LAR cm2gm-1). Co inoculation of Burkholderia territorii + Burkholderia anthina + Organic Manure showed highest root-shoot ratio and Coinoculation of Penicillium simplicissimum + Org. manure showed higher Net assimilation rate (NAR). However, Bacterial and fungal inoculants were also used as potent bioinoculants for the growth and establishment of crops of forest tree species.

Haplotype-based pangenomes reveal genetic variations and climate adaptations in moso bamboo populations

Moso bamboo (Phyllostachys edulis), an ecologically and economically important forest species in East Asia, plays vital roles in carbon sequestration and climate change mitigation. However, intensifying climate change threatens moso bamboo survival. Here we generate high-quality haplotype-based pangenome assemblies for 16 representative moso bamboo accessions and integrated these assemblies with 427 previously resequenced accessions. Characterization of the haplotype-based pangenome reveals extensive genetic variation, predominantly between haplotypes rather than within accessions. Many genes with allele-specific expression patterns are implicated in climate responses. Integrating spatiotemporal climate data reveals more than 1050 variations associated with pivotal climate factors, including temperature and precipitation. Climate-associated variations enable the prediction of increased genetic risk across the northern and western regions of China under future emissions scenarios, underscoring the threats posed by rising temperatures. Our integrated haplotype-based pangenome elucidates moso bamboo’s local climate adaptation mechanisms and provides critical genomic resources for addressing intensifying climate pressures on this essential bamboo. More broadly, this study demonstrates the power of long-read sequencing in dissecting adaptive traits in climate-sensitive species, advancing evolutionary knowledge to support conservation.