Small Chain Research Articles

Chemical Interaction Regulates the Folding and Topology of the G-Quadruplex Exclusively Induced by a Crowder.

The folding and stability of G-quadruplexes (Gq) are correlated with cancer and depend significantly on the chemical environment. Crowders are an important constituent of living cells. However, an understanding of the folding and topology of Gq induced exclusively by a crowder is lacking. Hence, folding and stabilization of the human telomere (htel) induced by polyethylene glycol and its derivative crowders have been studied using different biophysical techniques without the addition of salt. The data suggest that the crowder can alone induce the folding of the htel sequence into Gq and the topology of the folded structure depends on the composition of the crowder. Interestingly, a small chain size crowder favors the folding of the htel duplex to Gq, whereas a larger crowder prefers to stabilize the duplex form. Thermochemical data suggest that the nonlinear trend of the stability of folded Gq is modulated mainly by hydrogen bonding between the flexible part of the crowder and nucleobases, and the role of the excluded volume is not prominent. These findings might play an important role in improving our understanding of the folding and stabilization of htel in complex bimolecular environments.

Thermal properties of phase change materials ionic liquid/fatty acids for thermal energy storage applications

Researchers have developed advanced energy storage techniques in response to the depletion of energy resources and the escalation of environmental problems caused by increasing population and technological advancements. One of the most promising methods to overcome such issues is the latent heat thermal energy storage (TES) method, which employs phase change materials (PCMs). TES using PCMs are an important category of novel materials that significantly contribute to the efficient use and conservation of solar energy and wasted heat. This work presents a new family of PCMs based on ionic liquid (IL) tris(2-hydroxyethylammonium) formate and fatty acids for the first time that operate in the temperature range of 50–150 °C and offer a safe and inexpensive capacity. Good chemical and thermal stability, low flammability, and low volatility along with the potential to tune chemical and phase properties provide an inherent “green” property for ILs that is well suited to PCMs. Using PCM3, tris(2-hydroxyethylammonium) formate/stearic acid, we demonstrate effective latent heat 246 J·g−1. The results of differential scanning calorimetry analysis show that the PCM2 tris(2-hydroxyethylammonium) formate/palmitic acid has a higher heat capacity 8.194 J·g−1·K−1 at the melting point than the other two PCMs due to its small alkyl chain. Thermal stability analyses show the maximum stability (98 %) for PCM3. Additionally, based on the structure of these PCMs, this study explores the molecular basis for the high thermal energy storage capacity of these materials and highlights the significance of hydrogen bonds in PCM performance. Using simple, cost-effective materials, this method gets around the complexity and expense of composite PCMs. We present design recommendations for implementing our approach in the management of thermal energy storage applications.

Changes in structural parameters of SARA fractions during heavy oil hydrocracking using dispersed catalysts

Most of the characterization of SARA fractions of heavy crude oils during hydrocracking reactions is focused only on asphaltenes, and scarce works are devoted to analyze the differences in the structural parameters of all SARA fractions. In this work, a heavy crude oil is upgraded by non-catalytic and catalytic hydrocracking in a batch reactor at low severity conditions (3.9 MPa H2 pressure, 380 °C temperature, 800 rpm stirring rate, and 4 h reaction time). Three ore catalysts (hematite, magnetite and molybdenite) and one analytical grade catalyst (iron oxide) are employed. After reaction, the upgraded oils are first distilled and then separated into SARA fractions by the ASTM D86-16a and ASTM D2007-11 methods, respectively. NMR (1H and 13C), FTIR and GPC analyses are used to characterize SARA fractions before and after hydrocracking. The hydrocracking products exhibited a reduction in the average molecular weight of all SARA fractions as function of the hydrogenation capacity of each catalyst in the following order: Fe2O3 (analytical grade) > Molybdenite > Hematite > Magnetite. The structural parameters of saturates fraction remains unchanged except for the production of small length aliphatic chains from heavier fractions. For aromatics, resins and asphaltenes fractions, the number of aliphatic carbons is reduced due to dealkylation reactions increasing their aromaticity. For resins and asphaltenes fractions, hydrogenation and ring opening reactions are also carried out. Mo-based catalyst is mainly aimed at the conversion of asphaltenes, while the Fe-based catalysts focused on the conversion of resins.

Biosensors Based on Gold Nano-Clusters

The world is entering an era of strong infectious diseases, and it is urgent to develop a new type of rapid, efficient detection system. This graph specifically illustrates the detection function of the gold nanoparticles, and the gold nanoparticles-based sensor. Gold-based nanoclusters (NCs) which has a small particle size, has a high degree of stability and no impact on the biological activity. Gold-based NCs has a surface plasma resonance effect and produces visible color, which can be detected by observing the color change using the agglomeration reaction of the detected substance with Gold-based NCs. In order to specifically detect certain biomolecules, some functional groups or small DNA molecular chains of nanolodin are usually modified on it to have a selective detection capability. In the review, we introduce a total of four nano-gold applications, for bacteria, viruses, DNA and cancer, also, respectively elaborating some recent Gold-based NCs detection applications.

Small businesses and supply chain sustainability

By Mysore Ramaswamy. This paper seeks to fill this gap by analyzing how technologies can help sustainability of the supply chain and by developing a framework for supply chains for small business enterprises.

Utilization of residual fatty acids in matter organic non-glycerol from a soy biodiesel plant in filaments used for 3D printing

Matter organic non-glycerol (MONG) is a considerable waste output (20%−25% of crude glycerol) typically landfilled by soy biodiesel plants. In this work, soy MONG was characterized for potential use as a copolymer to produce filaments for 3D printing with an intent to add value and redirect it from landfills. As a copolymer, MONG was evaluated to reduce the synthetic polymer content of the natural fiber composites (NFC). Even though the general thermal behavior of the MONG was compared to that of a thermoplastic polymer in composite applications, it is dependent on the composition of the MONG, which is a variable depending on plant discharge waste. In order to improve the thermal stability of MONG, we evaluated two pretreatments (acid and acid + peroxide). The acid + peroxide pretreatment resulted in a stabilized paste with decreased soap content, increased crystallinity, low molecular weight small chain fatty acids, and a stable blend as a copolymer with a thermoplastic polymer. This treatment increased formic acid (17.53%) in MONG, along with hydrogen peroxide, led to epoxidation exhibited by the increased concentration of oxirane (5.6%) evaluating treated MONG as a copolymer in polymer processing and 3D printing.

Phytochemical potential of berries: An overview

Introduction: Phytochemicals, or secondary metabolites, present in small fruits are responsible for improving the health of consumers when included in the daily diet. All edible forms of berries are considered safe functional foods because they have nutritional properties and therapeutic potential. Objective: Therefore, this narrative review aims to analyze the state of the art on the phytochemical potential of the six main small fruits (blackberry, physalis, raspberry, blueberry, strawberry and grape), to gather information on the application of strategies to obtain berries with higher concentrations of biomolecules and to present the benefits of phytochemicals to the consuming public. Methodology: In the first stage of this narrative review, the cultivation scenario of these six main berries is contextualized. Subsequently, a temporal metasynthesis on berry phytochemicals is performed. In the last part of this review, we detail the biomolecule profile of blackberry, physalis, raspberry, blueberry, strawberry and grape and focus on their action against diseases. Results: The consumption of these six berries triggers anti-diabetic, anti-inflammatory, anti-cancer, anti-aging, anti-obesity, anti-microbial, anti-ulcer and radioprotective, neuroprotective and glucoregulatory actions. Despite scientific and clinical evidence on the positive effects of small fruit consumption on human health, their consumption remains low. Conclusions: The creation of public policies will contribute to improve the scenario of berry intake because it will involve the entire small fruit production chain: scientists, producers, food and pharmaceutical industries, and consumers.

Direct-to-Video (On Demand): New Industrial and Cultural Valuations of Nontheatrical Film Releases

Direct-to-Video (On Demand): New Industrial and Cultural Valuations of Nontheatrical Film Releases

A molecular basis for tetramer destabilization and aggregation of transthyretin Ala97Ser.

Transthyretin (TTR)-related amyloidosis (ATTR) is a syndrome of diseases characterized by the extracellular deposition of fibrillar materials containing TTR variants. Ala97Ser (A97S) is the major mutation reported in Taiwanese ATTR patients. Here, we combine atomic resolution structural information together with the biochemical data to demonstrate that substitution of polar Ser for a small hydrophobic side chain of Ala at residue 97 of TTR largely influences the local packing density of the FG-loop, thus leading to the conformational instability of native tetramer, the increased monomeric species, and thus the enhanced amyloidogenicity of apo-A97S. Based on calorimetric studies, the tetramer destabilization of A97S can be substantially altered by interacting with native stabilizers via similarly energetic patterns compared to that of wild-type (WT) TTR; however, stabilizer binding partially rearranges the networks of hydrogen bonding in TTR variants while FG-loops of tetrameric A97S still remain relatively flexible. Moreover, TTR in complexed with holo-retinol binding protein 4 is slightly influenced by the structural and dynamic changes of FG-loop caused by A97S substitution with an approximately five-fold difference in binding affinity. Collectively, our findings suggest that the amyloidogenic A97S mutation destabilizes TTR by increasing the flexibility of the FG-loop in the monomer, thus modulating the rate of amyloid fibrillization.

Digestion profile, antioxidant, and antidiabetic capacity of Morchella esculenta exopolysaccharide: in vitro, in vivo and microbiota analysis.

Novel functional polysaccharides from fungi are important nutraceuticals. An exopolysaccharide, Morchella esculenta exopolysaccharide (MEP 2), was extracted and purified from the fermentation liquor of M. esculenta. The aim of this study was to investigate its digestion profile, antioxidant capacity, and effect on the microbiota composition in diabetic mice. The study found that MEP 2 was stable during in vitro saliva digestion but was partially degraded during gastric digestion. The digest enzymes exerted a negligible effect on the chemical structure of MEP 2. Molecular weight and atomic force microscope (AFM) images suggest that both smaller chains and larger aggregations were produced. Scanning electron microscope (SEM) images reveal that the surface morphology was much altered after intestinal digestion. After digestion, the antioxidant ability increased as revealed by the 2,2-diphenyl-1-picrylhydrazyl (DPPH) and 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) assays. Both MEP 2 and its digested components showed strong α-amylase and moderate α-glucosidase inhibition activity, leading us to further investigate its ability to modulate the diabetic symptoms. The MEP 2 treatment ameliorated the inflammatory cell infiltration and increased the size of pancreas inlets. Serum concentration of HbA1c was significantly reduced. Blood glucose level during the oral glucose tolerance test (OGTT) was also slightly lower. The MEP 2 increased the diversity of the gut microbiota and modulated the abundance of several important bacteria including Alcaligenaceae, Caulobacteraceae, Prevotella, Brevundimonas, Demequina, and several Lachnospiraceae species. It was found that MEP 2 was partially degraded during in vitro digestion. Its potential antidiabetic bioactivity may be associated with its α-amylase inhibition and gut microbiome modulation ability. © 2023 Society of Chemical Industry.

Collaborative site selection study for cold chain distribution centers under low carbon policies

In order to solve the problem of cross-layout of cold chain logistics network and optimize the resource allocation of small and medium-sized cold chain logistics enterprises, based on the concept of low-carbon economic development and with the aim of minimizing the total cost, this paper constructs a cold chain distribution center location model including refrigeration cost and carbon emission cost from the microscopic perspective of enterprises, and selects two small and medium-sized cold chain logistics enterprises for simulation, and the simulation results show that the model can achieve the effect of saving operation cost, goods flow cost, carbon emission cost and refrigeration cost.

New insights into the age and origin of two small Cretaceous seamount chains proximal to the Northwestern Hawaiian Ridge

AbstractThe Northwestern Hawaiian Ridge is an age-progressive volcanic chain sourced from the Hawaiian mantle plume. Proximal to the Northwestern Hawaiian Ridge are several clusters of smaller seamounts and ridges with limited age constraints and unknown geodynamic origins. This study presents new bathymetric data and 40Ar/39Ar age determinations from lava flow samples recovered by remotely operated vehicle (ROV) from two east–west-trending chains of seamounts that lie north of the Pūhāhonu and Mokumanamana volcanoes. The previously unexplored Naifeh Chain (28°48′N,167°48′W) and Plumeria Chain (25°36′N, 164°35′W) contain five volcanic structures each, including three guyots in the Naifeh Chain. New 40Ar/39Ar age determinations indicate that the Naifeh Chain formed ca. 88 Ma and the Plumeria Chain ca. 85 Ma. The Cretaceous ages, coupled with a perpendicular orientation of the seamounts relative to absolute Pacific plate motion at that time, eliminate either a Miocene Hawaiian volcanic arch or Cretaceous mantle-plume origin. The seamounts lie on oceanic crust that is modeled to be 10–15 Ma older than the corresponding seamounts. Here, two models are put forth to explain the origin of these enigmatic seamount chains as well as the similar nearby Mendelssohn Seamounts. (1) Diffuse lithospheric extension results in the formation of these seamounts until the initiation of the Kula-Pacific spreading center in the north at 84–79 Ma, which alleviates the tension. (2) Shear-driven upwelling of enriched mantle material beneath young oceanic lithosphere results in an age-progressive seamount track that is approximately perpendicular to the spreading ridge. Here we show that all sampled seamounts proximal to the Northwestern Hawaiian Ridge are intraplate in nature, but their formations can be attributed to both plume and plate processes.

Using PCL oligomers to study the differences in melting behavior between polymers and small molecules crystals

Polymer crystals usually show a completely different melting behavior than small molecules. Instead of starting from the crystal growth front, the lamellar crystals within polymer spherulites always experience a successive thickening process upon heating before they simultaneously melt. However, a systematic comparative study of the different melting behavior of crystals formed by small and large polymer chains is still scarce. In this work, two PCL oligomers with similar molecular weight are selected to study their crystallization and melting behavior. The defect-free oligomer (PCL2.4) exhibits a similar melting behavior as polymeric crystals (where spherulites melt simultaneously). In contrast, the other oligomer (PCL2.0) with a mid-chain defect shows prominent surface melting starting at the spherulite growth front. SAXS, SSA thermal fractionation, and flash DSC results confirm that an extended chain-like crystal structure could form at relatively high crystallization temperatures. According to the Gibbs-Thomson equation, the melting temperature of PCL2.0 crystals at the spherulite growth front is relatively lower than in the inner part due to different surface free energies. On the other hand, the thermal stability of PCL2.4 is enhanced due to melting and recrystallization during heating, and the spherulites show identical melting points and lamellar thicknesses at their growth front centers.

Significance of miRNAs on the thyroid cancer progression and resistance to treatment with special attention to the role of cross-talk between signaling pathways.

Thyroid cancer (TC) is the most prevalent endocrine malignant tumor. It has many types, the Papillary thyroid cancer (PTC)(most common and follicular thyroid carcinoma (FTC). Several risk factors have been associated with TC radiation exposure, autoimmunity, and genetics. Microribonucleic acids (miRNAs) are the most important genetic determinants of TC. They are small chains of nucleic acids that are able to inhibit the expression of several target genes. They could target several genes involved in TC proliferation, angiogenesis, apoptosis, development, and even resistance to therapy. Besides, they could influence the stemness of TC. Moreover, they could regulate several signaling pathways such as WNT/β-catenin, PI3K/AKT/mTOR axis, JAK/STAT, TGF- β, EGFR, and P53. Besides signaling pathways, miRNAs are also involved in the resistance of TC to major treatments such as surgery, thyroid hormone-inhibiting therapy, radioactive iodine, and adjuvant radiation. The stability and sensitivity of several miRNAs might be exploited as an approach for the usage of miRNAs as diagnostic and/or prognostic tools in TC.

The Association between Dysbiosis and Neurological Conditions Often Manifesting with Chronic Pain.

The prevalence of neurological conditions which manifest with chronic pain is increasing globally, where the World Health Organisation has now classified chronic pain as a risk factor for death by suicide. While many chronic pain conditions have a definitive underlying aetiology, non-somatic conditions represent difficult-to-diagnose and difficult-to-treat public health issues. The interaction of the immune system and nervous system has become an important area in understanding the occurrence of neuroinflammation, nociception, peripheral and central sensitisation seen in chronic pain. More recently, however, the role of the resident microbial species in the human gastrointestinal tract has become evident. Dysbiosis, an alteration in the microbial species present in favour of non-beneficial and pathogenic species has emerged as important in many chronic pain conditions, including functional somatic syndromes, autoimmune disease and neurological diseases. In particular, a decreased abundance of small chain fatty acid, e.g., butyrate-producing bacteria, including Faecalibacterium, Firmicutes and some Bacteroides spp., is frequently evident in morbidities associated with long-term pain. Microbes involved in the production of neurotransmitters serotonin, GABA, glutamate and dopamine, which mediate the gut-brain, axis are also important. This review outlines the dysbiosis present in many disease states manifesting with chronic pain, where an overlap in morbidities is also frequently present in patients.

What drives job satisfaction among community pharmacists? An application of relative importance analysis

BackgroundPharmacy employers want to improve pharmacists' job satisfaction, but ratings of job satisfaction are highly subjective, as evaluating job satisfaction involves weighing simultaneously the importance of multiple correlated determinants that are often perceived unequally. ObjectivesTo 1) describe the application of relative importance analysis in estimating the predictive ability of correlated determinants of job satisfaction, and to rank the determinants in order of relative importance, and 2) explore how the perceived relative importance of job satisfaction predictors may vary across community pharmacists' age, gender, and work setting categories. MethodsData were obtained from the 2019 National Pharmacy Workforce Survey administered to 96,110 licensed U.S. pharmacists. Multiple regression analysis (MR) and relative weight analysis (RWA) were used to assess the predictive ability of determinants to explain pharmacists' job satisfaction. Subgroup analyses were performed to explore variations in the perceived relative importance of predictors across pharmacists' age, gender and work setting categories. ResultsOver the entire sample of community pharmacists, no personal experience of workplace discrimination [RW = 0.0613, rank = 1] and less reported engagement in advanced dispensing activities [RW = 0.0235, rank = 2] were most associated with greater job satisfaction, as both predictors jointly accounted for 67.5% of the predicted criterion variance (R2). Pharmacists' compensation was observed to have the lowest perceived relative importance for predicting job satisfaction [RW = 0.0005, rank = 6], accounting for 0.5% of R2. Between-group comparisons showed that, no personal experience of workplace discrimination had the highest perceived relative importance for job satisfaction across pharmacists' age groups, among women, and across most work settings except small chain pharmacies. Within-group comparisons showed that pharmacists' compensation was significantly more important than professional interactions (ΔRW(PC-PPI) 0.2900 [0.0637, 0.5360]) for job satisfaction among pharmacists in large chain pharmacies, while patient-care services was significantly more important than compensation for job satisfaction in independent (ΔRW(PPS-PC) 0.1761 [0.0017, 0.5980]) and health system retail pharmacists (ΔRW(PPS-PC) 0.4190 [0.0444, 0.8303]). ConclusionsRelative importance analysis corroborated multiple regression and provided a more interpretable presentation of variable influence on community pharmacists job satisfaction as the importance of personal and workplace characteristics in how pharmacists evaluate their job satisfaction varied across age, gender and work setting categories.

Effects of additives on properties of self-skinning polyurethane foam for automobile steering wheel

Commercialized polyurethane foam products for automobile steering wheels have been committed to the development of products with comprehensive properties such as low density, high production efficiency and environmental protection. Based on this, this article has launched a series of experiments to explore the effects of different types of chain extenders, blowing agents and catalysts on the mechanical properties, cell structure, skin and reactivity of self-skinning polyurethane foams for automobile steering wheels. The results show that the hardness and tensile strength of the foam gradually decrease with the chain growth of small molecular chain extenders (ethylene glycol, 1.3-propanediol, 1.4-butanediol), and the elongation at break increases gradually. The foaming agent formic acid is more conducive than water as it favors the formation of small but compact cells, thus dense skin. The catalytic efficiency of non-reactive catalysts (A1, KC101 and DabcoEG) is higher than that of reactive catalysts (LED-103, ZR-50, DPA). The theoretical research for the development of high-performance and high-efficiency polyurethane foam products for automobile steering wheels.

Tailoring structural, rheological and gelling properties of watermelon rind pectin by enzymatic treatments

In this work, pectin extracts from watermelon rind (WRP) were enzymatically treated to evaluate their potential for preparing hydrogels with the addition of CaCl 2 . Based on a previous work, two different conditions were selected to obtain WRP extracts according to the 1) highest yield (OP) or 2) highest yield without negatively affecting the branching and native structure of pectin (OPA). Firstly, both WRP extracts were enzymatically modified using different treatments (de-esterification and/or de-branching of galacturonic and arabinose side chains, and deproteinization), and their impact on the esterification degree, monosaccharide composition and changes on their structural properties (linearity and branching degree) were deeply analysed. Then, the effect of the structural properties of the resulting pectin on the rheological behaviour and nanostructure of the hydrogels was investigated. The presence of long branched side chains and high methyl-esterified galacturonic acid chains promoted the formation of weaker hydrogels whereas de-esterification of the original pectin enabled intermolecular association giving rise to stronger hydrogels with the formation of ordered and densely packed structures (as deduced from SAXS results). However, the presence of small arabinogalactans side chains in the de-branched and de-esterified pectin extracts acted as reinforcement agents, inducing the formation of more densely packed networks and stronger hydrogels than their less-branched counterpart. These results demonstrated the impact of the pectin structure on the hydrogel-forming capacity. • Two watermelon rind pectin extracts were enzymatically modified. • Enzymes acting on neutral sugar side chains did not significantly de-branch the pectin structure. • Weaker gels were obtained when pectins were treated with de-branching enzymes. • Stronger gels were produced when pectin was de-esterified. • The strongest gels were produced when de-esterification and de-branching enzymes were combined.

MiRNAs role in bladder cancer pathogenesis and targeted therapy: Signaling pathways interplay - A review.

Bladder cancer (BC) is the 11th most popular cancer in females and 4th in males. A lot of efforts have been exerted to improve BC patients' care. Besides, new approaches have been developed to enhance the efficiency of BC diagnosis, prognosis, therapeutics, and monitoring. MicroRNAs (miRNAs, miRs) are small chain nucleic acids that can regulate wide networks of cellular events. They can inhibit or degrade their target protein-encoding genes. The miRNAs are either downregulated or upregulated in BC due to epigenetic alterations or biogenesis machinery abnormalities. In BC, dysregulation of miRNAs is associated with cell cycle arrest, apoptosis, proliferation, metastasis, treatment resistance, and other activities. A variety of miRNAs have been related to tumor kind, stage, or patient survival. Besides, although new approaches for using miRNAs in the diagnosis, prognosis, and treatment of BC have been developed, it still needs further investigations. In the next words, we illustrate the recent advances in the role of miRNAs in BC aspects. They include the role of miRNAs in BC pathogenesis and therapy. Besides, the clinical applications of miRNAs in BC diagnosis, prognosis, and treatment are also discussed.

Mapping women’s role in small scale fisheries value chain in India for fisheries sustainability

Mapping women’s role in small scale fisheries value chain in India for fisheries sustainability