Shifts In Community Structure Research Articles

Winter cover crops and irrigation alter soil microbial community composition in an arid cropping system

Cover cropping is a well-established strategy to improve soil health, especially in arid and semi-arid agricultural systems. Benefits to soil health are often mediated via effects of cover crops on soil microbial community structure, function and diversity, crucial for regulating soil biogeochemical cycles, eventually promoting agricultural sustainability. However, limited water availability is a major constraint for both cover crop growth and soil microbial activity. This study sought to characterize and elucidate the shifts in soil microbial community structure in response to different cover crops and differential irrigation treatments using phospholipid fatty acid (PLFA) profiling in southern New Mexico. We tested five cover crop treatments: Pisum sativum (Australian winter pea), Hordeum vulgare cv. Stockford (barley), Brassica juncea cv. Caliente 199 (brown mustard), a three-way mix, and a fallow control — in combination with irrigation treatments of one, two, or three irrigation applications — in a split-plot design over two years. Zea mays (sweet corn) was grown as the summer cash crop. We collected soil samples just after cover crop planting in the fall of 2018, following second year cover crop termination but during Z. mays growth in June 2020, and after the second season of Z. mays growth in October 2020. Differential irrigation treatments did not lead to consistent patterns of change under any cover crop or irrigation treatment. However, PLFA parameters in cover cropped compared to winter fallow plots tended to decrease under one and three irrigations but increased with two irrigations. Changes were more common for bacterial than for fungal PLFA biomarkers, and more common in B. juncea and H. vulgare cover crops than in P. sativa or the mix. It is important to note that, while cover crop effects were inconsistent, cover cropping did lead to some shifts in PLFA biomarkers, even in the short two-year period of cover cropping.

Spartina alterniflora invasion reduces soil microbial diversity and weakens soil microbial inter-species relationships in coastal wetlands.

Soil microorganisms play a crucial role in the plant invasion process, acting as both drivers of and responders to plant invasion. However, the effects of plant invasion on the complexity and stability of co-occurrence networks of soil microbial communities remain unclear. Here, we investigated how the invasion of Spartina alterniflora affected the diversity, composition, and co-occurrence networks of soil bacterial and fungal communities in the Yellow River Delta, China. Compared to the native plant (Suaeda salsa), S. alterniflora invasion decreased the α-diversity of soil bacterial communities but did not affect that of fungal communities. The β-diversity of soil bacterial and fungal communities under S. salsa and S. alterniflora habitats also differed dramatically. S. alterniflora invasion increased the relative abundance of the copiotrophic phylum Bacteroidota, whereas decreased the relative abundances of the oligotrophic phyla Acidobacteriota and Gemmatimonadota. Additionally, the relative abundance of Chytridiomycota, known for its role in degrading recalcitrant organic matter, increased substantially within the soil fungal community. Functional predictions revealed that S. alterniflora invasion increased the relative abundance of certain soil bacteria involved in carbon and nitrogen cycling, including aerobic chemoheterotrophy, nitrate reduction, and nitrate respiration. More importantly, S. alterniflora invasion reduced the complexity and stability of both soil bacterial and fungal community networks. The shifts in soil microbial community structure and diversity were mainly induced by soil available nutrients and soil salinity. Overall, our study highlights the profound impacts of S. alterniflora invasion on soil microbial communities, which could further indicate the modification of ecosystem functioning by invasive species.

Sustainable soil rehabilitation with multiple network structures of layered double hydroxide beads: Immobilization of heavy metals, fertilizer release, and water retention

The remediation of heavy metal-contaminated soils necessitated a holistic approach that encompassed water and fertilizer conservation alongside soil property restoration. This study introduced the synthesis of (poly)acrylamide-layered double hydroxide gel spheres (PAM-LDH beads), which were designed to simultaneously immobilize heavy metals, control the release of fertilizers, and enhance soil water retention. Laboratory soil experiments under diverse conditions highlighted the superior performance of PAM-LDH beads in the immobilization of hexavalent chromium (Cr(VI)). The layered double hydroxide (LDH) component was identified as the key player in Cr(VI) immobilization, with anion exchange being the predominant mechanism. Notably, the encapsulated urea within the beads was released independently of environmental influences, governed by a concentration gradient across the beads surface. This release process was characterized by an initial phase of absorptive swelling followed by a diffusive phase. The impact on plant growth was assessed, revealing that PAM-LDH beads significantly curtailed Cr(VI) accumulation and alleviated its phytotoxic effects. Changes in the carbon (C) and nitrogen (N) content of the plants suggested that the urea encapsulated within the beads served as a nutrient source, contributing to soil fertility. Moreover, the water-holding capacity and soil-water characteristic curves of PAM-LDH beads suggested that these superabsorbent beads could delay soil water evaporation. The observed shifts in microbial community structure provided evidence for the enhancement of soil carbon and nitrogen cycles, indicative of improved soil properties.

Seasonal response of soil microbial community structure and life history strategies to winter snow cover change in a temperate forest

Snow cover provides a thermally stable and humid soil environment and thereby regulates soil microbial communities and biogeochemical cycling. A warmer world with large reductions in snow cover and earlier spring snowmelt may disrupt this stability and associated ecosystem functioning. Yet, little is known about the response of soil microbial communities to decreased snowpack and potential carry-over effects beyond the snow cover period. Herein, we tested this response by conducting a snowpack manipulation experiment (control, addition, and removal) in a temperate forest. Our results showed that fungi were more sensitive to changes in snowpack. Thicker snowpack increased the diversity of fungi, but had weak effects on the diversity of bacteria in winter. Thickening snow cover promoted the ratio of fungi to bacteria abundance across the year, and such relative increase in fungi abundance was largely driven by Basidiomycota phyla (Agaricomycetes class). Increased snowpack decreased soil nitrate concentration, and produced carry-over biogeochemical effects evidenced by increased summer β-1,4-glucosidase and N-acetyl-β-glucosaminidase activities. On a seasonal scale, microbial biomass peaked at both winter and summer; winter microbial community was fungi dominated, while bacteria dominated in summer. The abundances of bacterial phyla had greater seasonal variation than fungal phyla. Specifically, Actinobacteria had greater dominance in winter than in summer, while Acidobacteria, Proteobacteria, and Verrucomicrobia had greater abundance in summer than in winter. Microbial high yield-resource acquisition-stress tolerance life history strategies showed significant seasonal tradeoffs, i.e., resource acquisition and stress tolerance strategies dominated in summer, while high yield strategy dominated in winter. Overall, our findings underline that climate-induced reductions in snow cover can disrupt soil biogeochemical cycling also beyond the snow cover period due to shifts in soil microbial community structure and life history strategies.

Resolving abrupt frontal gradients in zooplankton community composition and marine snow fields with an autonomous Zooglider

AbstractAn autonomous Zooglider navigated across the California Current Front into low salinity, minty waters characteristic of the California Current proper in both summers of 2019 and 2021. Diving to 400 m depth, Zooglider transited another near‐surface frontal gradient somewhat inshore. These frontal gradients were generally associated with changes in intensity, size composition, and Diel Vertical Migration responses of acoustic backscatterers. They were also associated with pronounced changes in zooplankton community composition, as assessed by a shadowgraph imaging Zoocam. Zoocam detected a decline in concentrations of copepods, appendicularians, and marine snow in the offshore direction, and an overall shift in community structure to a higher proportion of carnivorous taxa (and, in 2019, of planktonic rhizaria). No taxon was consistently elevated at all the peak frontal gradients, but appendicularians, copepods, and rhizarians sometimes showed front‐related increases in concentration. Such frontal gradient regions represent relatively abrupt transitions to different communities of planktonic organisms and suspended marine snow particles, with consequences for predator–prey relationships and the dominant vectors of particle export into subsurface waters.

Remarkable shifts in the megabenthic community structure over four decades in Tokyo Bay, Japan, in relation to environmental variations

We investigated long-term changes in the megabenthic community in Tokyo Bay, Japan, using data from fisheries-independent trawl surveys conducted from 1977 to 2023. In addition, we examined the potential relationship between changes in biotic communities and environmental conditions. The total abundance and biomass exhibited an increasing trend until 1987, followed by a substantial decline from the late 1980s to the 1990s due to a decrease in small to medium-sized fish and crustacean species. Meanwhile, a marked increase in the number of large fish (including elasmobranchs), mollusks, and echinoids, was observed in the 2000s. These shifts in the megabenthic community structure were correlated with an increase in water temperature and a decrease in nutrient concentrations and copepod densities. Cumulative evidence suggests that a remarkable shift in the megabenthic community structure occurred between the 1970s and the 2020s, which was possibly associated with variations in the environmental conditions in Tokyo Bay.

Microplastics in granular sequencing batch reactors: Effects on pollutant removal dynamics and the microbial community

This study investigated the relationship between microplastic (MP) presence and pollutant removal in granular sludge sequencing batch reactors (GSBRs). Two types of MPs, polyethylene (PE) and polyethylene terephthalate (PET), were introduced in varying concentrations to assess their effects on microbial community dynamics and rates of nitrogen, phosphorus, and organic compound removal. The study revealed type-dependent variations in the deposition of MPs within the biomass, with PET-MPs exhibiting a stronger affinity for accumulation in biomass. A 50 mg/L dose of PET-MP decreased COD removal efficiency by approximately 4 % while increasing P-PO4 removal efficiency by around 7 % compared to the control reactor. The rate of nitrogen compounds removal decreased with higher PET-MP dosages but increased with higher PE-MP dosages. An analysis of microbial activity and gene abundance highlighted the influence of MPs on the expression of the nosZ and ppk1 genes, which code enzymes responsible for nitrogen and phosphorus transformations. The study also explored shifts in microbial community structure, revealing alterations with changes in MP dose and type. This research contributes valuable insights into the complex interactions between MP, microbial communities, and pollutant removal processes in GSBR systems, with implications for the sustainable management of wastewater treatment in the presence of MP.

Seasonality and relative abundance within an elasmobranch assemblage near a major biogeographic divide.

Nearshore waters are utilized by elasmobranchs in various ways, including foraging, reproduction, and migration. Multiple elasmobranch species have been previously documented in the nearshore waters of North Carolina, USA, which has a biogeographic break at Cape Hatteras on the Atlantic coast. However, comprehensive understanding of the elasmobranch community in this region is still lacking. Monthly year-round trawling conducted along two ocean transects (near Cape Lookout and Masonboro Inlet in 5 to 18 m depth) in Onslow Bay, North Carolina provided the opportunity to examine the dynamics and seasonal patterns of this community using a multivariate approach, including permutational multivariate analysis of variance and nonparametric BIO-ENV analysis. From November 2004 to April 2008, 21,149 elasmobranchs comprised of 20 species were caught, dominated by spiny dogfish (Squalus acanthias) and clearnose skate (Rostroraja eglanteria). All species exhibited seasonal variation in abundance, but several key species contributed the most to seasonal differences in species composition within each transect. Spiny dogfish was most abundant in the winter at both locations, comprised mainly of mature females. Although clearnose skate was caught in all seasons, the species was most abundant during the spring and fall. Atlantic sharpnose (Rhizoprionodon terraenovae) was one of the most abundant species in the summer, and two distinct size cohorts were documented. Temperature appeared to be the main abiotic factor driving the community assemblage. The extensive year-round sampling provided the ability to better understand the dramatic seasonal variation in species composition and provides new information on the relative abundance of several understudied elasmobranch species that may be of significant ecological importance. Our results underscore the importance of inner continental shelf waters as important elasmobranch habitat and provide baseline data to examine for future shifts in timing and community structure at the northern portion of the biogeographic break at Cape Hatteras.

Weather and leaf age separately contribute to temporal shifts in phyllosphere community structure and composition.

All ITS DNA amplicon sequence raw data are deposited in the NCBI Sequence Read Archive (SRA), BioProject number PRJNA1107252, data will be released upon publication. All community data, metadata, taxonomic data, and R code necessary to reproduce these results are deposited in the GitHub repository archived on Zenodo: 10.5281/zenodo.11106439.

Microbial dynamics in rapidly transforming Arctic proglacial landscapes

Arctic glacial environments are rapidly changing, as the Arctic warms at a rate three to four times faster than the global average (the phenomenon known as Arctic amplification). Microorganisms are uniquely adapted to extreme glacial environments and studying how ecological and climatic feedback loops affect the diversity of these communities is crucial to the characterisation of vulnerable Arctic habitats. Glacial landscapes span a wide range of habitats, from glacier ice to marine waters, and encompass terrestrial, aquatic, and interzonal systems. While glacier shrinkage has been the focus of scientific attention, auxiliary habitats are also impacted by rapid glacier retreat. Auxiliary habitats include terrestrial systems, such as outwash plains, vegetated periglacial environments, and aquatic systems, such as glacier-fed streams, lakes, and glacier-adjacent marine environments. Glacier recession drives high-impact changes in glacier-associated habitats: rising temperatures, increased light penetration of glacial streams, changes in nitrogen-to-phosphate ratios, and increases in availability of glacier-derived organic compounds. In turn, microbial systems in these habitats may experience changes in nutrient dynamics and shifts in community structures. The exposure of new lands by retreating glaciers may also result in increased dust and microbial dispersal into the atmosphere. Here, we discuss the effects of climate change on glacial microbiomes and the feedback loops between microbial community dynamics and the large-scale climatic processes in the Arctic. We characterise aspects of vulnerable microbial ecosystems and highlight the importance of preserving unseen microbial biodiversity. We then outline current capacities for microbial conservation, focusing on cryopreservation and biobanking. Lastly, we suggest future research directions and steps that academic and governmental institutions may take to foster research and collaboration with Indigenous communities.

Shifts in Microbial Community Structure and Co-occurrence Network along a Wide Soil Salinity Gradient.

The response of microbiomes to salinity has been clarified in different geographic scales or ecosystems. However, how soil microbial community structure and interaction respond to salinity across wide salinity range and climatic region is still unclearly resolved. To address this issue, we examined the microbial community's composition in saline soils from two climatic regions (coastal wetland and arid desert). Our research confirms that soil salinity had a negative effect on soil nutrient content. Salinity decreased the relative abundance of bacteria, but increased archaea abundance, leading to the shifts from bacteria dominant community to archaea dominant community. Low-water medium-salinity soil (LWMS) had the most complex archaeal community network, whereas for bacteria, the most complex bacterial community network was observed in low-water high-salinity soils (LWHS). Key microbial taxa differed in three salinity gradients. Salinity, soil water content, pH, total nitrogen (TN), and soil organic carbon (SOC) were the main driving factors for the composition of archaeal and bacterial community. Salinity directly affected archaeal community, but indirectly influenced bacteria community through SOC; pH affected archaeal community indirectly through TN, but directly affected bacterial community. Our study suggests that soil salinity dramatically influences diversity, composition, and interactions within the microbial community.

Shift in Bacterial Community Structure in the Biodegradation of Benzene and Toluene under Sulfate-Reducing Condition.

Groundwater contaminated by benzene and toluene is a common issue, posing a threat to the ecosystems and human health. The removal of benzene and toluene under sulfate-reducing condition is well known, but how the bacterial community shifts during this process remains unclear. This study aims to evaluate the shift in bacterial community structure during the biodegradation of benzene and toluene under sulfate-reducing condition. In this study, groundwater contaminated with benzene and toluene were collected from the field and used to construct three artificial samples: Control (benzene 50 mg/L, toluene 1.24 mg/L, sulfate 470 mg/L, and HgCl2 250 mg/L), S1 (benzene 50 mg/L, toluene 1.24 mg/L, sulfate 470 mg/L), and S2 (benzene 100 mg/L, toluene 2.5 mg/L, sulfate 940 mg/L). The contaminants (benzene and toluene), geochemical parameters (sulfate, ORP, and pH), and bacterial community structure in the artificial samples were monitored over time. By the end of this study (day 90), approximately 99% of benzene and 96% of toluene could be eliminated in both S1 and S2 artificial samples, while in the Control artificial sample the contaminant levels remained unchanged due to microbial inactivation. The richness of bacterial communities initially decreased but subsequently increased over time in both S1 and S2 artificial samples. Under sulfate-reducing condition, key players in benzene and toluene degradation were identified as Pseudomonas, Janthinobacterium, Novosphingobium, Staphylococcus, and Bradyrhizobium. The results could provide scientific basis for remediation and risk management strategies at the benzene and toluene contaminated sites.

Distinct roles of biochar and pyrite substrates in enhancing nutrient and heavy metals removal in intermittent-aerated constructed wetlands: Performances and mechanism

Constructed wetlands have been widely employed as a cost-effective and environmentally friendly alternative for treating primary and secondary sewage effluents. In this study, biochar and pyrite were utilized as electron donor substrates in intermittent-aerated vertical flow constructed wetlands to strengthen the nutrient and heavy metals removal simultaneously, and the response of nutrient reduction and microbial community to heavy metals stress was also explored. The results indicated that biochar addition exhibited a better nitrogen removal, while pyrite addition greatly promoted the phosphorus removal. Moreover, the high removal efficiencies of Cu2+, Pb2+ and Cd2+ (above 90%) except for Zn2+ were obtained in each system. However, the exposure of heavy metals decreased phosphorus removal while had little effect on nitrogen removal. The influent load and intermittent aeration implementation led to a significant shift in microbial community structures, but microbial biodiversity and abundance decreased under the exposure of heavy metals. Particularly, Thiobacillus and Ferritrophicum, associated with sulfur autotrophic denitrification and iron autotrophic denitrification, were more abundant in pyrite-based wetland systems.

Influence of the oxidative phosphorylation uncoupler m-chlorophenol on activated sludge production, nutrients removal efficiency and bacterial community structure of a membrane reactor system

In this work, the effects of the metabolic uncoupler meta-chlorophenol (m-CP) on excess sludge production and performance of an MBR system, as well as on activated sludge communities, were investigated. MLVSS were significantly reduced from 8410 mg/L to 5175 mg/L during the first week of the addition of 125 mg/L m-CP, while, thereafter, biosolids were restored to the level prior to uncoupler’s addition. Adding m-CP resulted in more severe effects on nitrifiers rather than organoheterotrophs. Both alkalinity, dissolved oxygen (DO), electrical conductivity (EC) and pH data evidenced the adverse effect of m-CP on the nitrification process. PO43--P concentration drastically raised immediately after m-CP addition from 2.48 ± 0.35 mg/L to 11.84 mg/L, possibly due to the uncoupling of P-release and the hydrolysis of phosphorus reserves. Diversity was highly affected by the addition of m-CP, resulting in the significant decrease of Chao1, Shannon and Fisher indices. By establishing stable operating conditions after m-CP addition, Pseudomonas, Arcanobacterium, Trichococcus, Kocuria and Actinobaculum raised from almost undetectable levels (0.12 % of the total relative abundance) to 35.9 %, 17.8 %, 15.1 %, 11.5 % and 5.7 %, respectively, indicating a massive shift in bacterial community structure, while no nitrifying taxa were detected after m-CP addition.

Soil nutrient availability affects tundra plant community composition and plant–vole interactions

ABSTRACT Climate change in the Arctic is predicted to drastically alter carbon and nutrient pools, plant communities, and plant–animal interactions. We examined how four levels of long-term (16 years) nutrient addition in moist acidic tundra affected plant community structure and the abundance of Eriophorum vaginatum, the preferred forage for tundra voles (Microtus oeconomus). We also explored how simulated press and pulse herbivory for four years affected Eriophorum at these different nutrient levels. Shifts in plant community structure, reductions in species diversity and richness, and decreased Eriophorum abundance were pronounced at the highest levels of nutrient addition. Eriophorum abundance was negatively correlated with deciduous shrub abundance, likely caused by light limitation in fertilized plots. Added nutrients generally increased Eriophorum leaf length, but effects varied among years and simulated herbivory treatments. After being clipped once, Eriophorum leaves regrew in fertilized plots to the same length as leaves that had not been clipped, demonstrating recovery. Our results show how interannual variation in plant growth and animal activity might exacerbate or dampen responses over multiple years. Changes to plant community composition and plant–vole interactions associated with increased soil nutrients resulting from warming could have cascading impacts on arctic ecosystems and carbon cycling.

Phytoplankton biomass in northern lakes reveals a complex response to global change

Global change may introduce fundamental alterations in phytoplankton biomass and community structure that can alter the productivity of northern lakes. In this study, we utilized Swedish and Finnish monitoring data from lakes that are spatially (135 lakes) and temporally (1995-2019, 110 lakes) extensive to assess how phytoplankton biomass (PB) of dominant phytoplankton groups related to changes in water temperature, pH and key nutrients [total phosphorus (TP), total nitrogen (TN), total organic carbon (TOC), iron (Fe)] along spatial (Fennoscandia) and temporal (25 years) gradients. Using a machine learning approach, we found that TP was the most important determinant of total PB and biomass of a specific species of Raphidophyceae - Gonyostomum semen - and Cyanobacteria (both typically with adverse impacts on food-webs and water quality) in spatial analyses, while Fe and pH were second in importance for G. semen and TN and pH were second and third in importance for Cyanobacteria. However, in temporal analyses, decreasing Fe and increasing pH and TOC were associated with a decrease in G. semen and an increase in Cyanobacteria. In addition, in many lakes increasing TOC seemed to have generated browning to an extent that significantly reduced PB. The identified discrepancy between the spatial and temporal results suggests that substitutions of data for space-for-time may not be adequate to characterize long-term effects of global change on phytoplankton. Further, we found that total PB exhibited contrasting temporal trends (increasing in northern- and decreasing in southern Fennoscandia), with the decline in total PB being more pronounced than the increase. Among phytoplankton, G. semen biomass showed the strongest decline, while cyanobacterial biomass showed the strongest increase over 25 years. Our findings suggest that progressing browning and changes in Fe and pH promote significant temporal changes in PB and shifts in phytoplankton community structures in northern lakes.

A country‐wide examination of effects of urbanization on common birds

AbstractUrbanization forms one of the most drastic alterations of the environment and poses a major threat to wildlife. The human–induced modifications of the landscape may affect individual's fitness resulting in population declines. Research on how urbanization affects fitness traits has shown mixed results. However, studies typically contrasted data from a single species from few urban and non‐urban sites collected over short timeframes. Examining multiple species across a broad urbanization gradient enables a more robust comparison and understanding of how different species are impacted by urbanization‐knowledge crucial for generating population predictions, which are essential for conservation management. Here, we use data from a nation‐wide citizen science project to examine variation in survival and relative body mass and size (wing length) of common passerine birds, collected along an urbanization gradient in the Netherlands over an 8‐year period. Urbanization was measured as the distance from the city's border and the proportion of impervious surface area. Although the overall association between urbanization and survival was slightly negative, there was support for lower survival closer to the city in three species (chiffchaff Phylloscopus collybita, European robin Erithacus rubecula, European greenfinch Chloris chloris) and higher survival closer to the city in two (great tit Parus major and house sparrow Passer domesticus) of the 11 species examined. The contrasting survival successes among species suggest that ongoing urbanization may lead to shifts in community structure and loss of biodiversity. Impacts of urbanization on relative mass and size also exhibited varying effects, albeit less pronounced, and these effects were not correlated with the effects on survival. This implies that body mass and size cannot be used as indicators for urban‐associated patterns of survival. Our results further imply that effective conservation management targeting bird communities should involve a range of diverse actions, as focusing on single measures is unlikely to simultaneously impact multiple species due to the variation in responses to urbanization.

Urban stormwater green infrastructure: Evaluating the public health service role of bioretention using microbial source tracking and bacterial community analyses

Bioretention cells (BRCs) control stormwater flow on-site during precipitation, reducing runoff and improving water quality through chemical, physical, and biological processes. While BRCs are effective in these aspects, they provide habitats for wildlife and may face microbial hazards from fecal shedding, posing a potential threat to human health and the nearby environment. However, limited knowledge exists regarding the ability to control microbial hazards (e.g., beyond using typical indicator bacteria) through stormwater biofiltration. Therefore, the purpose of this study is to characterize changes in the bacterial community of urban stormwater undergoing bioretention treatment, with the goal of assessing the public health implications of these green infrastructure solutions. Samples from BRC inflow and outflow in Columbus, Ohio, were collected post-heavy storms from October 2021 to March 2022. Conventional culture-based E. coli monitoring and microbial source tracking (MST) were conducted to identify major fecal contamination extent and its sources (i.e., human, canine, avian, and ruminant). Droplet digital polymerase chain reaction (ddPCR) was utilized to quantify the level of host-associated fecal contamination in addition to three antibiotic resistant genes (ARGs): tetracycline resistance gene (tetQ), sulfonamide resistance gene (sul1), and Klebsiella pneumoniae carbapenemase resistance gene (blaKPC). Subsequently, 16S rRNA gene sequencing was conducted to characterize bacterial community differences between stormwater BRC inflow and outflow. Untreated urban stormwater reflects anthropogenic contamination, suggesting it as a potential source of contamination to waterbodies and urban environments. When comparing inlet and outlet BRC samples, urban stormwater treated via biofiltration did not increase microbial hazards, and changes in bacterial taxa and alpha diversity were negligible. Beta diversity results reveal a significant shift in bacterial community structure, while simultaneously enhancing the water quality (i.e., reduction of metals, total suspended solids, total nitrogen) of urban stormwater. Significant correlations were found between the bacterial community diversity of urban stormwater with fecal contamination (e.g. dog) and ARG (sul1), rainfall intensity, and water quality (hardness, total phosphorous). The study concludes that bioretention technology can sustainably maintain urban microbial water quality without posing additional public health risks, making it a viable green infrastructure solution for heavy rainfall events exacerbated by climate change.

Species Diversity and Composition of Macrophytes in Shallabugh Wetland, Ganderbal, Jammu, and Kashmir, India

Macrophyte diversity, richness, and composition of the Shallabugh wetland Reserve, one of the Important Bird and Biodiversity Area in India. The wetland shows the presence of 39 plant species of 27 families and three tree species belonging to three families and a diversity index of H = 3.12 and Evenness e^H/S = 0.5836. The high Importance Value Index (IVI=22.8) was recorded for Typha latifolia, followed by Ceratophyllum demersum (IVI=19.2). The shift in macrophyte community structure is evidenced by the local extinction of Nelumbo nucifera from the Shallabugh wetland area and the near-disappearance of some economically important plants such as Trapa natans (IVI= 0.24). The investigation of various aspects of the wetland ecology of Shallabugh reveals that species composition has witnessed great changes over the years. The conversion of the 141 hectares of wetland into grassland gave way for terrestrial species to flourish. The study serves as the baseline study of the macrophyte community composition and structure of the Shallabugh wetland.

Disturbance of the human gut microbiota in patients with Myotonic Dystrophy type 1

Myotonic dystrophy type 1 (DM1) is a rare autosomal dominant genetic disorder. Although DM1 is primarily characterized by progressive muscular weakness, it exhibits many multisystemic manifestations, such as cognitive deficits, cardiac conduction abnormalities, and cataracts, as well as endocrine and reproductive issues. Additionally, the gastrointestinal (GI) tract is frequently affected, encompassing the entire digestive tract. However, the underlying causes of these GI symptoms remain uncertain, whether it is biomechanical problems of the intestine, involvement of bacterial communities, or both. The primary objective of this study is to investigate the structural changes in the gut microbiome of DM1 patients. To achieve this purpose, 35 patients with DM1 were recruited from the DM-Scope registry of the neuromuscular clinic in the Saguenay–Lac-St-Jean region of the province of Québec, Canada. Stool samples from these 35 patients, including 15 paired samples with family members living with them as controls, were collected. Subsequently, these samples were sequenced by 16S MiSeq and were analyzed with DADA2 to generate taxonomic signatures. Our analysis revealed that the DM1 status correlated with changes in gut bacterial community. Notably, there were differences in the relative abundance of Bacteroidota, Euryarchaeota, Fusobacteriota, and Cyanobacteria Phyla compared to healthy controls. However, no significant shift in gut microbiome community structure was observed between DM1 phenotypes. These findings provide valuable insights into how the gut bacterial community, in conjunction with biomechanical factors, could potentially influence the gastrointestinal tract of DM1 patients.