For the large-scale systems with complex causal connection in practical problems, fusion rough cognitive maps and graph mining methods, designed a rough central area mining algorithm of rough cognitive maps to complete the pruning problem of rough cognitive map, simplified the structure of rough cognitive map to facilitate the further relations. First of all, from the perspective of the arc, give another definition of rough cognitive map, introduce the concept of rough centrality R accuracy; second, define certainty -possible class road, according to the given threshold to determine the rough central area. Finally, design an effective rough central area mining algorithm for further analysis and forecast the rough cognitive map.