Development Of Repository Research Articles

A study of Open Access research data repositories developed by BRICS countries

Purpose In the present era, research data is a concern for researchers, as they are trying to find new ways to communicate their research findings and conclusions to other researchers in order to increase visibility and credibility. BRICS nations are fast emerging economies and contribute significantly in research output. This study makes an effort to analyze and explore the role of BRICS nations towards open access research data repository registered with Registry of Research Data Repositories. Design/methodology/approach The data were gathered from re3data repository, and the search was limited to BRICS nations. The data were further analyzed and tabulated as per set parameters, namely, country-wise distribution, types of contents, subject coverage and language diversity. Findings The findings depict that in terms of strength, India has the highest number of data repositories, thereby achieved the first rank among BRICS nations, and South Africa has the least number of data repositories, whereas in terms of content type and subject coverage, India again is leading among BRICS nations. The English language is used by repositories as the main language of the interface. Practical implications The study helps to understand the development of research data repositories by BRICS nations. The study is further beneficial to researchers, as Registry of Research Data Repository provides a single platform to access repositories from various disciplines. Readily available data saves time, money and efforts of researchers and helps the researcher in completing their research activity in a very short span of time. Originality/value The paper has investigated open access data repositories of BRICS nation that has not been attempted earlier. This gives readers comprehensive overview of research data repositories developed in fast emerging economies of the global. The paper can be very helpful for information managers, OA promoters and education and research policy makers to devise plans and policy bearing in mind the evolving research channels in emerging economies.

REPOSITORI DPR RI DALAM RANGKA MENDUKUNG PUSAT DATA PARLEMEN

A work/product of a state institution is one of the elements of cultural wealth that should be preserved and handled properly. This is done so that the historical value and information contained can be passed on to the next young generation. For this reason, the Library of the Parliament of Indonesia as a special library of The House of Representatives of the Republic of Indonesia (DPR RI), seeks to carry out its role as a collector/deposit of products of the DPR RI, the Secretariat General and the Expertise Body of the Indonesian House of Representatives (Secretariat General and BK DPR RI), by building a Repository DPR. However, in the development of the Repository DPR, the library faces obstacles in adding the number of product that can be included in the Repository DPR. The purpose of this paper is how to provide information and build awareness of the importance of the Repository DPR to the DPR RI, Secretariat General and BK DPR RI. The method used in this paper is a description of case studies and reference studies on the implementation of the Regulation of Secretariat General of DPR RI Number 11 of 2017 concerning Repository DPR. The type and source of data used are a brief report on Repository development activities.

Development of an informatics system for accelerating biomedical research.

The Biomedical Research Informatics Computing System (BRICS) was developed to support multiple disease-focused research programs. Seven service modules are integrated together to provide a collaborative and extensible web-based environment. The modules-Data Dictionary, Account Management, Query Tool, Protocol and Form Research Management System, Meta Study, Data Repository and Globally Unique Identifier -facilitate the management of research protocols, to submit, process, curate, access and store clinical, imaging, and derived genomics data within the associated data repositories. Multiple instances of BRICS are deployed to support various biomedical research communities focused on accelerating discoveries for rare diseases, Traumatic Brain Injury, Parkinson's Disease, inherited eye diseases and symptom science research. No Personally Identifiable Information is stored within the data repositories. Digital Object Identifiers are associated with the research studies. Reusability of biomedical data is enhanced by Common Data Elements (CDEs) which enable systematic collection, analysis and sharing of data. The use of CDEs with a service-oriented informatics architecture enabled the development of disease-specific repositories that support hypothesis-based biomedical research.

A dataset describing data discovery and reuse practices in research

This paper presents a dataset produced from the largest known survey examining how researchers and support professionals discover, make sense of and reuse secondary research data. 1677 respondents in 105 countries representing a variety of disciplinary domains, professional roles and stages in their academic careers completed the survey. The results represent the data needs, sources and strategies used to locate data, and the criteria employed in data evaluation of these respondents. The data detailed in this paper have the potential to be reused to inform the development of data discovery systems, data repositories, training activities and policies for a variety of general and specific user communities.

Assessing the efficiency of Iran health system in making progress towards universal health coverage: a comparative panel data analysis

BackgroundBuilding upon decades of continuous reforms, Iran has been implementing various initiatives to reach universal health coverage (UHC). Improving efficiency is a crucial intermediate policy objective for UHC. Therefore, this article aimed to measure the efficiency and productivity changes of the Iranian health system in making progress towards UHC during 2010−2015 in comparison with 36 selected other upper-middle-income countries.MethodsWe used panel data to measure the variations in technical efficiency (TE) and total factor productivity (TFP) through an extended data envelopment analysis (EDEA) and Malmquist productivity index, respectively. General government health expenditure (GGHE) per capita (International dollar) was selected as the input variable. Service coverage of diphtheria, tetanus and pertussis; family planning; antiretroviral therapy; skilled attendants at birth; Tuberculosis treatment success rate; and GGHE as % of total health expenditure (THE) were considered as output variables. The data for each indicator were taken from the Global Health Observatory data repository and World Development Indicator database, for 6 years (2010−2015).ResultsThe TE scores of Iran’s health system were 0.75, 0.77, 0.74, 0.74, 0.97, and 0.84 in the period 2010–2015, respectively. TFP improved in 2011 (1.02), 2013 (1.01), and 2014 (1.30, generally). The overall efficiency and TFP increased in 2014. Changes made in CCHE per capita and GGHE/THE attributed to the increase of efficiency.ConclusionThere is a growing demand for efficiency improvements in the health systems to achieve UHC. While there are no defined set of indicators or precise methods to measure health system efficiency, EDEA helped us to draw the picture of health system efficiency in Iran. Our findings highlighted the essential need for targeted and sustained interventions, i.e., allocation of enough proportion of public funds to the health sector, to improve universal financial coverage against health costs aiming to enhance the future performance of Iran’s health system, ultimately. Such tailored interventions may also be useful for settings with similar context to speed up their movement towards improving efficiency, which in turn might lead to more resources to reach UHC.

Data Science Tools for Monitoring the Global Repository Eco-System and its Lines of Evolution

The global network of scholarly repositories for the publication and dissemination of scientific publications and related materials can already look back on a history of more than twenty years. During this period, there have been many developments in terms of technical optimization and the increase of content. It is crucial to observe and analyze this evolution in order to draw conclusions for the further development of repositories. The basis for such an analysis is data. The Open Archives Initiative (OAI) service provider Bielefeld Academic Search Engine (BASE) started indexing repositories in 2004 and has collected metadata also on repositories. This paper presents the main features of a planned repository monitoring system. Data have been collected since 2004 and includes basic repository metadata as well as publication metadata of a repository. This information allows an in-depth analysis of many indicators in different logical combinations. This paper outlines the systems approach and the integration of data science techniques. It describes the intended monitoring system and shows the first results.

Development of a Portuguese COVID-19 Imaging Repository and Database: Learning and Sharing Knowledgeduring a Pandemic

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3-D printed customizable vitrification devices for preservation of genetic resources of aquatic species

Sperm vitrification as an alternative approach to conventional cryopreservation (equilibrium freezing) allows quick and low-cost sample preservation and is suitable for small-bodied aquatic species with miniscule testis, fieldwork at remote locations, and small-scale freezing for research purposes. The goal of this present study was to develop operational prototypes of 3-dimensional (3-D) printed vitrification devices with innovative components that can provide comprehensive functionalities for practical repository development for aquatic species. The design featured an elongated loop to suspend a thin film of sperm sample in cryoprotectant, a retractable sleeve to protect the vitrified samples and allow permanent labeling, a handle to facilitate processing and storage, and a shaft with annular grooves to guide positioning of the protective retractable sleeve. To span a wide range of sample capacities and configurations, a total of 39 different configurations (3 loop lengths ×13 loop heights) were fabricated by 3-D printing with the thermoplastics polylactic acid (PLA) and acrylonitrile butadiene styrene (ABS). A total of 86 devices were fabricated with ABS filament with a print failure rate of 9%, and 97 devices were fabricated with PLA filament with a failure rate of 20 %. Major types of printing failures included disconnected loops, insufficient build surface adhesion, stringing, and inconsistent extrusion. The sample volume capacity ranged from 1 to 47 μL and had linear relationships to the loop lengths and layer numbers. Vitrified samples were observed in 10-mm and 15-mm loops fabricated with PLA and ABS but not in 20-mm loops. This study demonstrated the feasibility of development of standardized low-cost ($0.05 material cost) devices fabricated by 3-D printing with practical functions including vitrification, volume control, labeling, protection, and storage within conventional systems. These prototypes can be further developed, standardized, and used to assist development of germplasm repositories to protect the genetic resources of aquatic species by user groups such as breeders, hatcheries, aquariums, and researchers.

Mergin’ Mode: Mixed Reality and Geoinformatics for Monument Demonstration

Since smart devices are becoming the primary technological means for daily human activities related to user-location, location-based services constitute a crucial component of the related smart applications. Meanwhile, traditional geospatial tools such as geographic information systems (GIS) in conjunction with photogrammetric techniques and 3D visualization frameworks can achieve immersive virtual reality over custom virtual geospatial worlds. In such environments, 3D scenes with virtual beings and monuments with the assistance of storytelling techniques may reconstruct historical sites and “revive” historical events. Boosting of Internet and wireless network speeds and mixed reality (MR) capabilities generate great opportunities for the development of location-based smart applications with cultural heritage content. This paper presents the MR authoring tool of “Mergin’ Mode” project, aimed at monument demonstration through the merging of the real with the virtual, assisted by geoinformatics technologies. The project does not aim at simply producing an MR solution, but more importantly, an open source platform that relies on location-based data and services, exploiting geospatial functionalities. In the long term, it aspires to contribute to the development of open cultural data repositories and the incorporation of cultural data in location-based services and smart guides, to enable the web of open cultural data, thereby adding extra value to the existing cultural-tourism ecosystem.

LO13: Development of a national, standardized simulation case template

Innovation Concept: A major barrier to the development of a national simulation case repository and multi-site simulation research is the lack of a standardized national case template. This issue was recently identified as a priority research topic for Canadian simulation based education (SBE) research in emergency medicine (EM). We partnered with the EM Simulation Education Researchers Collaborative (EM-SERC) to develop a national simulation template. Methods: The EM Sim Cases template was chosen as a starting point for the consensus process. We generated feedback on the template using a three-phase modified nominal group technique. Members of the EM-SERC mailing list were consulted, which included 20 EM simulation educators from every Canadian medical school except Northern Ontario School of Medicine and Memorial University. When comments conflicted, the sentiment with more comments in favour was incorporated. Curriculum, Tool or Material: In phase one we sought free-text feedback on the EM Sim Cases template via email. We received 65 comments from 11 respondents. An inductive thematic analysis identified four major themes (formatting, objectives, debriefing, and assessment tools). In phase two we sought free-text feedback on the revised template via email. A second thematic analysis on 40 comments from 12 respondents identified three broad themes (formatting, objectives, and debriefing). In phase three we sought feedback on the penultimate template via focus groups with simulation educators and technologists at multiple Canadian universities. This phase generated 98 specific comments which were grouped according to the section of the template being discussed and used to develop the final template (posted on emsimcases.com). Conclusion: We describe a national consensus-building process which resulted in a simulation case template endorsed by simulation educators from across Canada. This template has the potential to: 1. Reduce the replication of effort across sites by facilitating the sharing of simulation cases. 2. Enable national collaboration on the development of both simulation cases and curricula. 3. Facilitate multi centre simulation-based research by removing confounders related to the local adoption of an unfamiliar case template. This could improve the rigour and validity of these studies by reducing inter-site variability. 4. Increase the validity of any simulation scenarios developed for use in national high-stakes assessment.

The Indonesian National Scientific Repository: A Case Study of Research Data Sharing

Abstract This study discusses the sharing of research data through the Repositori Ilmiah Nasional, the Indonesian national scientific repository, which is managed by the Center for Scientific Data and Documentation, Indonesian Institute of Sciences (Pusat Dokumentasi dan Informasi Ilmiah, Lembaga Ilmu Pengetahuan Indonesia, known by the abbreviation PDDI-LIPI). The purpose of this study is to describe the process of research data sharing and identify supporting factors and obstacles faced in that process. This study uses a qualitative approach, with a case study method. Data collection techniques included field observations and observations on the repository system; semi-structured interviews with several informants, including researchers as well as development and librarian teams; and, analysis of policy documents and guidelines. Through these investigations, we discovered that while the Center has developed a new DataVerse repository system to enable research data sharing, there are still several issues that impede the repository from meeting institutional goals for increased data access. There is a need for additional training and socialization of researchers, to encourage and motivate them to share their research data through this service. Additionally, staff members need to gain competence in the management and curation of data. Researchers and librarians involved in research data sharing activities still face various obstacles in the areas of policy, service visibility, and promotion. This research is expected to increase the awareness of researchers, librarians, and repository development teams about each other’s needs and to aid them in collaborating with each other to optimize the sharing of research of data through the repository.

Development of an international data repository and research resource: the Prospective studies of Acute Child Trauma and Recovery (PACT/R) Data Archive

ABSTRACT Background: Studies that identify children after acute trauma and prospectively track risk/protective factors and trauma responses over time are resource-intensive; small sample sizes often limit power and generalizability. The Prospective studies of Acute Child Trauma and Recovery (PACT/R) Data Archive was created to facilitate more robust integrative cross-study data analyses. Objectives: To (a) describe creation of this research resource, including harmonization of key variables; (b) describe key study- and participant-level variables; and (c) examine retention to follow-up across studies. Methods: For the first 30 studies in the Archive, we described study-level (design factors, retention rates) and participant-level (demographic, event, traumatic stress) variables. We used Chi square or ANOVA to examine study- and participant-level variables potentially associated with retention. Results: These 30 prospective studies (N per study = 50 to 568; overall N = 5499) conducted by 15 research teams in 5 countries enrolled children exposed to injury (46%), disaster (24%), violence (13%), traffic accidents (10%), or other acute events. Participants were school-age or adolescent (97%), 60% were male, and approximately half were of minority ethnicity. Using harmonized data from 22 measures, 24% reported significant traumatic stress ≥1 month post-event. Other commonly assessed outcomes included depression (19 studies), internalizing/externalizing symptoms (19), and parent mental health (19). Studies involved 2 to 5 research assessments; 80% of participants were retained for ≥2 assessments. At the study level, greater retention was associated with more planned assessments. At the participant level, adolescents, minority youth, and those of lower socioeconomic status had lower retention rates. Conclusion: This project demonstrates the feasibility and value of bringing together traumatic stress research data and making it available for re-use. As an ongoing research resource, the Archive can promote ‘FAIR’ data practices and facilitate integrated analyses to advance understanding of child traumatic stress.

A web repository for geo-located 3D digital cultural heritage models

Recent advances in 3D surveying and web technologies have made a significant contribution to the digital conservation and dissemination of cultural heritage. 3D cultural heritage models are now a critical component in the cultural heritage conservation, which are also employed for other use cases in education, research, tourism, virtual and augmented reality. The World Wide Web is used as a primary medium for dissemination of 3D cultural heritage models, while databases including databases of web repositories for long-term archiving. This article aims to report a new methodology and a web repository to integrate maps, 3D models, and geospatial data such as geolocation. It can, therefore, be utilized for long-term archiving and visualization of geo-located 3D digital cultural heritage models on the Web. Unlike many previous related projects which developed the web repositories from the ground up, the web repository built using this methodology is based on free and open-source, easy-to-implement content management system namely KeystoneJS and other associated frameworks, which are reusable and completely extendable. It can, thereby, help cultural heritage organizations and cultural heritage professionals facilitate the rapid development of web repositories for geo-located 3D digital cultural heritage models, which can also be further extended per project requirements. While this methodology is presented for the cultural heritage domain in mind, in the long term it can be employed and extended for use in a wide range of domains such as archaeology, engineering, and geographic information systems (GIS) among others.

Development of a research project repository

The advances of technology resulting in the proliferation of mobile devices have changed the way we live and have necessitated the restructuring of the educational system. This can be employed to aid student’s participation in research studies. This study aims at promoting- research in universities amongst students by giving them the opportunity to exercise their scholarly abilities, easy access to research projects carried out by other students, collaboration with other students with similar research inclinations as well as gain visibility before the school management or companies interested in granting scholarships to outstanding works. This project is implemented using JavaScript, HTML and CSS for the front-end; Node.js, a JavaScript framework for the back-end and MongoDB for the database. It is a web application that enables the students to upload their research works, view the research of others and collaborate with peers. This system has a high potential to enhance student participation in universities’ research studies.

From "Informed" to "Engaged" Consent: Risks and Obligations in Consent for Participation in a Health Data Repository.

The development and use of large and dynamic health data repositories designed to support research pose challenges to traditional informed consent models. We used semi-structured interviewing (n=44) to elicit diverse research stakeholders' views of a model of consent appropriate to participation in initiatives that entail collection, long-term storage, and undetermined future research use of multiple types of health data. We demonstrate that, when considering health data repositories, research stakeholders replace a concept of consent as informed with one in which consent is engaged. In engaged consent, a participant's ongoing relationship with a repository serves as a substitute or adjunct to information exchange at enrollment. We detail research stakeholders' views of the risks of engaged consent and suggest questions for further study about engagement and consent procedures in initiatives that aim to store data for future unspecified research purposes.

A Content Analysis of Indian Research Data Repositories Prospects and Possibilities

The study aims to trace the development of Indian research data repositories (RDRs) and explore their content with the view of identifying prospects and possibilities. Further, it analyses the distribution of data repositories on the basis of content coverage, types of content, author identification system followed, software and the application programming interface used, subject wise number of repositories etc. The study is based on data repositories listed on the registry of data repositories accessible at http://www.re3data.org.The dataset was exported in Microsoft Excel format for analysis. A simple percentage method was followed in data analyses and results are presented through Tables and Figures. The study found a total of 2829 data repositories in existence worldwide. Further, it was seen that 1526 (53.9 %) are open and 924 (32.4 %) are restricted data repositories. Also, there are embargoed data repositories numbering 225 (8.0 %) and closed ones numbering 154 (5.4 %). There are 2829 RDRs covering 72 countries in the world. The study found that out of total 45 Indian RDRs, only 30 (67 %) are open, followed by restricted 12 (27 %) and 3 (6 %) that are closed. Majority of Indian RDRs (20) were developed in the year 2014. The study found that the majority of Indian RDRs (17) are‘disciplinary’. Further, the study also revealed that statistical data formats are available in a maximum of 31 (68.9 %) Indian RDRs. It was also seen that the majority of Indian RDRs (28) has datasets relating to ‘Life Sciences’. It was identified that only 20% of data repositories have been using metadata standards in metadata; the remaining 80% do not use any standards in metadata entry. This study covered only the research data repositories in India registered on the registry of data repositories. RDRs not listed in the registry of data repositories are left out.

Rejestracja dorobku naukowego w instytucjonalnych systemach repozytoryjnych polskich uniwersytetów

Cel/Teza: Artykuł przedstawia wyniki badań nad aktualnym stopniem rozwoju repozytoriów instytucjonalnych polskich uniwersytetów, w tym szczególnie nad stanem rejestracji dorobku naukowego i podstawami prawnymi regulującymi funkcjonowanie systemów repozytoryjnych. Celem badań było ustalenie poziomu otwartości polskich publikacji naukowych.Koncepcja/Metody badań: Autorka zbadała liczebność zasobów w różnych systemach rejestrujących dorobek naukowy pracowników uniwersytetów (repozytoriach, Archiwach Prac Dyplomowych (APD) oraz bibliografiach publikacji pracowników). Podstawą badań były informacje udostępnione na stronachinternetowych tych systemów oraz bibliotek i uczelni odpowiedzialnych za ich prowadzenie, a także innych instytucji i organizacji wspierających otwartą naukę w Polsce. Badania empiryczne autorka uzupełniła krytyczną analizą piśmiennictwa przedmiotu.Wyniki i wnioski: Dzięki zastosowanym metodom badawczym wykazano, że funkcjonujące obecnie systemy repozytoryjne polskich uniwersytetów spełniają swoje zadania w niewystarczającym stopniu, a proces ich rozwoju jest wolniejszy od oczekiwanego. Potwierdza to niewielka liczba rejestrowanych w nich publikacji i znikomy procent umocowań prawnych instytucjonalnej polityki otwartego dostępu.Zastosowanie praktyczne: Wnioski z badań mogą przyczynić się do poprawy stanu polskich repozytoriów instytucjonalnych. Mogą też posłużyć jako punkt wyjścia do dalszych badań systemów repozytoryjnych.Oryginalność/Wartość poznawcza: Podjęcie tematu stanu rejestracji dorobku naukowego w instytucjonalnych repozytoriach jest istotne z uwagi na aktualność zagadnienia otwierania dostępu do publikacji naukowych oraz w szerszym zakresie – otwierania nauki.

Use-Oriented Information and Knowledge Management: Information Production and Use Practices as an Element of the Value and Impact of Information

There is a broad consensus that better models for assessing the impact of information efforts are needed to inform information and knowledge management and digital preservation. In contrast to measuring the quality of information, less attention has been directed to the assessment of knowledge and information processes as its constituent. Using archaeology and archaeological information as a sample context, the aim of this conceptual paper is to probe in to the evaluation of the impact and usefulness of information by taking into account the practices of how it is produced, managed and used. On a basis of a review and discussion of earlier literature on the impact of information and evaluation and management of information in archaeology, it is proposed that a better understanding of how the impact of information unfolds as a part of its production, management and use could contribute to the development of infrastructures, repositories and procedures for the management of the preservation and use of these resources.

Developing a pediatric pain data repository.

The management of pediatric pain typically consists of individualized treatment plans and interventions that have not been systematically evaluated. There is an emerging need to create systems that can support the translation of clinical discoveries, facilitate the assessment of current interventions, and improve the collection of patient-centered data beyond routine clinical information. We present the development of the pediatric pain data repository, a custom-built system developed at Boston Children’s Hospital by a multidisciplinary pain treatment service. The Repository employs a web platform to collect standardized patient-reported outcomes and integrates this with electronic medical record data. To date, we have collected information on 2577 patients and anticipate adding approximately 500 new patients per year. Major strengths of the Repository include collection of extensive longitudinal patient-reported outcomes, automated clinical data abstraction, and integration of the system into clinical workflows to support medical decision making.

Mapping Open Access Publishing Trends in Bangladesh: A Study with Reference to Open Access Journals and Repositories

Open Access initiative in Bangladesh dates back to the opening of icddr, b Journal of Diarrhoeal Disease Research (JDDR) in 1997 by International Centre for Diarrhoeal Disease Research, Bangladesh. Since then considerable development of Open Access has occurred. The study also provided some recommendations for improvement of IR and open movement in Bangladesh. The paper analyzes current open access publishing trends in Bangladesh in the light of open access journals and repositories in Bangladesh. The data for the study were collected from BanglaJOL and OpenDOAR (Directory of Open Access Repositories) in August 2017.Thefindings of the study indicate that the trends towards the development of open access repositories are increasing among higher education and research institutions in Bangladesh. Through BanglaJOL nearly 97% of journals in Bangladesh are published open access. There are total 11 IR found in OpenDOAR and ROAR in Bangladesh. It is found in this study that among 11 repositories 8 repositories have specified policy rules with regards to metadata, data, content, submission, and preservation. But the scenario is different in terms of OAI-PMH compliance. Presently only 3 repositories are following the OAI-PMH protocols in Bangladesh. Moreover, this trend should be increased to a larger proportion and all toll-access publishing would be turned open in Bangladesh through mass consciousness and initiatives at broader level. This study recommends that present trend should be increased to a larger proportion and all toll-access publishing would be turned open in Bangladesh through mass consciousness and initiatives at broader level.