Populus Deltoides Research Articles

Deciphering the main determinants of O3 tolerance in Euramerican poplar genotypes

Tropospheric ozone (O3) is the main secondary pollutant and considered to be the most damaging for growth and productivity. O3 is well known to induce oxidative stress and Reactive Oxygen Species accumulation in leaf tissues. Several mechanisms have been suggested to enable trees to cope with such stress; however, their relative contribution to O3 tolerance is still unclear. Here, ten Euramerican poplar genotypes (Populus deltoides × nigra) were investigated regarding their response to 120 ppb of O3 for 3 weeks in order to determine main mechanisms and identify the key traits and strategies linked to a better tolerance to O3-induced oxidative stress. Results showed that ascorbate peroxidase and ascorbate regeneration through monodehydroascorbate reductase are the main determinants of O3 tolerance in Euramerican poplar, in protecting photosynthesis capacity from oxidative stress and therefore, maintaining growth and productivity. Besides, stomatal closure was harmful in sensitive genotypes, suggesting that avoiding strategy can be further deleterious under chronic ozone. Finally, O3-induced early senescence appeared essential when up scaling leaf-level mechanistic response to whole-plant productivity, in fine-tuning resource reallocation and photosynthesis area.

Genetic variation and growth stability of hybrid poplars in high-density short-rotation coppice stands in central Chile

Short-rotation coppice (SRC) using hybrid poplars for biomass production may be a productive alternative in Mediterranean zones. However, the degree of genetic control and the growth stability of poplar clones in high-density plantations remain unknown, and information is needed to reduce the selection time in SRC systems. The genetic variation and stability of growth traits with the age of hybrid clones (from interspecific crosses of Populus deltoides [D], P. trichocarpa [T], P. nigra [N] and P. maximowiczii [M]) were investigated under two planting densities (5000 and 10000 trees ha−1). The basal diameter and height of dominant shoots were measured at ages 1, 2 and 4 years. The total above-ground fresh weight of individual trees was also measured as an indicator of cumulative biomass at age 4 years. Clonal performance was not significantly changed by the planting density. Repeatability increased slightly from age 1 (0.58) to age 2 (0.65) but decreased by age 4 years (0.33). The highest clonal repeatability (0.54) value for above-ground fresh weight was observed for the T✕D cross, whereas the minimum value (0.27) was obtained when genotypes of all crosses were pooled. The age-to-age genetic correlations indicate high clonal stability over time. With respect to the complexities and time required for screening a large number of genotypes under SRC, the results of this study indicate that traits measured during the first growing season are stable indicators of clonal performance in SRC systems.

GmRAD: an integrated SNP calling pipeline for genetic mapping with RADseq across a hybrid population.

Restriction site-associated DNA sequencing (RADseq) is a powerful technology that has been extensively applied in population genetics, phylogenetics and genetic mapping. Although many software packages are available for ecological and evolutionary studies, a few effective tools are available for extracting genotype data with RADseq for genetic mapping, a prerequisite for quantitative trait locus mapping, comparative genomics and genome scaffold assembly. Here, we present an integrated pipeline called gmRAD for generating single nucleotide polymorphism (SNP) genotypes from RADseq data, de novo, across a genetic mapping population derived by crossing two parents. As an analytical strategy, the software takes five steps to implement the whole algorithms, including clustering the first (forward) reads of each parent, building two parental references, generating parental SNP catalogs, calling SNP genotypes across all individuals and filtering the genotype data for genetic linkage mapping. All the steps can be completed with a simple command line, but they can be also performed optionally if prerequisite files are available. To validate its application, we also performed a real data analysis with RADseq data from an F1 hybrid population derived by crossing Populus deltoides and Populus simonii. The software gmRAD is freely available at https://github.com/tongchf/gmRAD.

Enhancing Phytoextraction of HMs at Real Scale, by Combining Salicaceae Trees With Microbial Consortia

We applied an integrated phytoremediation system by inoculation of rhizosphere microbes on an area of 2000 m2 that was contaminated by heavy metals. Hybrid poplar (Populus deltoids x Populus nigra) and willow (Salix purpurea subsp. lambertiana) were planted on four parcels of 500 m2. Of these, two parcels were inoculated with an autochthonous consortium specially selected and the other two were not inoculated. The analyses were carried out on plant and soil samples collected at different times: month 0 (T0), 12 (T1), 24 (T2) and 36 (Tf). Total concentrations of HMs in the roots of Populus and Salix showed significant increase in the plants with rhizosphere microflora consortium. The plants treated with the consortium have an increased enzymatic activity of antioxidants and of stress markers. All enzymes showed an important contribution in enzymatic thiol-dependent ROS scavening mechanisms, through its over-expression at time T1 and T2 and a consequent stabilization at Tf which results in adaptive mechanisms. The plant-fungi-bacterium system was a valid candidate for the implementation of phytoremediation systems in the field, since the plants showed a greater capacity for adaptation and accumulation.

Identification of candidate genes for leaf scorch in Populus deltoids by the whole genome resequencing analysis

Leaf scorch exists as a common phenomenon in the development of plant, especially when plants encounter various adversities, which leads to great losses in agricultural production. Both Jinhong poplar (JHP) and Caihong poplar (CHP) (Populus deltoids) are obtained from a bud sport on Zhonghong poplar. Compared with CHP, JHP always exhibits leaf scorch, poor growth, premature leaf discoloration, and even death. In this study, the candidate genes associated with leaf scorch between JHP and CHP were identified by the whole genome resequencing using Illumina HiSeqTM. There were 218,880 polymorphic SNPs and 46,933 indels between JHP and CHP, respectively. Among these, the candidate genes carrying non-synonymous SNPs in coding regions were classified into 6 groups. The expression pattern of these candidate genes was also explored in JHP and CHP among different sampling stages. Combined with the qRT-PCR analysis, the results showed that genes associated with transport of various nutritional elements, senescence and MYB transcription factor might play important roles during the process of leaf scorch in Populus deltoids. Four genes belonging to these three groups carried more than three SNPs in their coding sequence, which might play important roles in leaf scorch. The above results provided candidate genes involved in leaf scorch in Populus deltoids, and made us better understand the molecular regulation mechanism of leaf scorch in Populus deltoids.

Using the rapid A-Ci response (RACiR) in the Li-Cor 6400 to measure developmental gradients of photosynthetic capacity in poplar.

The rapid A-Ci response (RACiR) technique alleviates limitations of measuring photosynthetic capacity by reducing the time needed to determine the maximum carboxylation rate (Vcmax ) and electron transport rate (Jmax ) in leaves. Photosynthetic capacity and its relationships with leaf development are important for understanding ecological and agricultural productivity; however, our current understanding is incomplete. Here, we show that RACiR can be used in previous generation gas exchange systems (i.e., the LI-6400) and apply this method to rapidly investigate developmental gradients of photosynthetic capacity in poplar. We compared RACiR-determined Vcmax and Jmax as well as respiration and stomatal conductance (gs ) across four stages of leaf expansion in Populus deltoides and the poplar hybrid 717-1B4 (Populus tremula×Populus alba). These physiological data were paired with leaf traits including nitrogen concentration, chlorophyll concentrations, and specific leaf area. Several traits displayed developmental trends that differed between the poplar species, demonstrating the utility of RACiR approaches to rapidly generate accurate measures of photosynthetic capacity. By using both new and old machines, we have shown how more investigators will be able to incorporate measurements of important photosynthetic traits in future studies and further our understanding of relationships between development and leaf-level physiology.

Effects of a large flood on woody vegetation along the regulated Missouri River, USA

AbstractIn 2011, a large, long‐duration flood occurred on the regulated Missouri River following six decades without flooding. This study evaluated the effects of the flood on riparian forest structure and composition. In 2012, 168 forest sites sampled in 2006–2009 were resampled on five floodplain segments between Montana and Missouri, with 80 sampled again in 2013–2014. Changes in riparian forest area over 2006–2012, by age class and segment, were assessed using aerial imagery and GIS. Repeated‐measures analysis of variance was used to examine (a) the initial effects of the flood (preflood to 2012) on tree and shrub stem densities, (b) postflood (2012–2014) changes in stem density, and (c) species‐level responses for cottonwood (Populus deltoides), eastern red cedar (Juniperus virginiana), and Russian olive (Elaeagnus angustifolia). Across the study area, forest area declined 6–38% among age classes, with the greatest declines in the youngest classes. Tree density declined 19–49% across segments from preflood to 2012 but did not change significantly from 2012 to 2014. Shrub density declined 52–89% across segments from preflood to 2012, with 73–78% declines in the two youngest age classes, but increased by 42% from 2012 to 2014. Cottonwood and Russian olive, but not red cedar, showed partial recovery in the shrub/sapling layer, increasing from 2012 to 2014. Although flooding is important for floodplain forest health, the 2011 flood had mixed effects, with significant mortality of native floodplain trees and shrubs and only limited cottonwood recruitment. The initial decline in invasive species (Russian olive and red cedar), however, suggests that flooding may be an effective management tool.

High-density genetic map of Populus deltoides constructed by using specific length amplified fragment sequencing

Populus deltoides is an important industrial tree species widely planted in many areas of the world, and de novo genome sequencing of this plant has been carried out by several research groups. A dense genetic map associating genome sequences is highly desirable for reconstructing the chromosome pseudomolecules using the obtained sequence scaffold assemblies. For this purpose, an intraspecific full-sib F1 mapping pedigree was established by using the sequenced P. deltoides as the maternal parent. With this mapping pedigree, we constructed a high-density genetic map using 92 randomly selected progenies. Single nucleotide polymorphism (SNP) markers were discovered by using specific length amplified fragment sequencing (SLAF-seq). In total, 487,038 SLAFs were generated, of which 179,360 were polymorphic. A high-density genetic map was built using HighMap software, which included 11,680 Mendelian segregation markers distributing in 2851 marker bins. The established map consisted of 19 linkage groups (LGs) that equaled to the 19 haploid chromosomes in poplar genome, and spanned a total genetic length of 3494.66 cM, with an average distance of 1.23 cM per marker bin. The map presented here will be useful for anchoring the genome sequence assemblies along chromosomes, and for many other aspects of genetic studies on P. deltoides and the closely related species.

Interactive Effects of Ozone and Drought on Antioxidant Enzyme Activities of Poplar Leaves

Ground-level ozone (O3) pollution and drought have become major environmental factors that threaten the normal growth of plants. In this study, we determined the effects of three O3 concentrations (charcoal-filtered air, CF, non-filtered air, NF and non-filtered air+40 nmol·mol-1, NF40), two water treatments (well-watered, WW, and mild drought, MD, 60% of WW in volumetric soil water content), and their interactions on the light-saturated photosynthesis rate (Asat) and on the activity of antioxidant enzymes and soluble proteins of the poplar '546' (Populus deltoids cv. 55/56×P. deltoides cv. Imperial). Results showed that Asat significantly decreased with elevated O3, and with interactions between O3 and drought. Drought significantly reduced the activities of catalase (CAT) and superoxide dismutase (SOD) but did not affect the activities of peroxidase (POD) or ascorbate peroxidase (APX). Reduction ranges in CAT and SOD increased with drought duration. APX activity significantly decreased with increasing O3 and drought, but soluble protein content did not. Activities of antioxidant enzymes were not significantly affected by elevated O3 and their interactions. Results provide a scientific basis for protection of poplar plantations in response to increasing O3 concentrations and drought under environmental changes.

Growth performance and stability of hybrid poplar clones in simultaneous tests on six sites

Growth, stability, and genotype x environment (GxE) interaction were investigated for 69 clones after five years at six sites in Minnesota. Fifty-three clones were Populus deltoides x Populus nigra (DxN) crosses, nine were P. deltoides x P. maximowiczi, ten other crosses. Most clones were previously screened for growth and disease resistance in Minnesota. Five-year diameter (DBH) and basal area (BA) at 1.38 m averaged 93.5 mm and 72.11 cm2, respectively, over the six sites. DBH site means varied from 109.0 to 79.4 mm. The fastest-growing clone BA was 64% and 49% larger than the mean of the two commercial standards and the mean of the population, respectively. Site, clone, and clone x site effects were highly significant in the ANOVA. The variance component for clone was over twice that of clone x site (GxE), indicating a relatively small reduction in genetic gain due to GxE. Clonal rank did not change between sites. GxE interaction was dominated by relative performance differences of clones on the different sites. Twenty-six percent of clones were stable (little change in growth between sites), 74% unstable. Stability coefficients of the unstable clones varied over a 99% range, indicating the population had high and variable phenotypic plasticity. Only 15% of clones were both stable and fast growing. Seven putatively superior clones, all DxN, were selected for future testing under near-commercial conditions. The results, if representative of other inter-specific Populus populations, suggest it will be difficult, and probably impractical, to reduce GxE with standard quantitative genetics methods in hybrid poplar tree improvement programs without sacrificing productivity gains.

Variation of Traits on Seeds and Germination Derived from the Hybridization between the Sections Tacamahaca and Aigeiros of the Genus Populus

Poplar is an important research organism, and species in sections Tacamahaca and Aigeiros, have advantages in terms of stress resistance, ease of propagation, and fast growth. Poplar species are widely distributed and well-adapted in the world, presenting a large potential for genetic improvement. Hybridization between different species allows us to generate offspring with a unique combinations of traits. This approach has a huge potential for breeding new poplar varieties that could aid in controlling desertification in the arid and semi-arid zones of the “Three-North” in China. In this study, we carried out a cross test scheme with nine female and thirteen male poplar trees. A total of 105,401 seeds were collected from 117 crosses. Flowering phenology and seed maturation differences of the hybrid progeny were monitored in greenhouses. For male trees, Populus deltoides had the longest flowering time. For female trees, Populus pseudo-simonii showed the longest seed maturity time. The number of carpals and ovules were not the same in different females. Meanwhile, three carpals were found in P. pseudo-simonii. A highly significant positive correlation was found between the seed size and the Thousand Kernel Weight, as well as the seedling cotyledon length. During seed germination, non-radicle and non-hypocotyl seedlings were observed. We also observed a number of cotyledon variants, including single and fused cotyledons, two cotyledons with one cotyledon cracking into two parts, three cotyledons, as well as four cotyledons. These results lay a favorable foundation for combining the research between the sections Tacamahaca and Aigeiros in future work.

Morphological, Physiological and Biochemical Responses of Poplar Plants to Drought Stress

Poplar clone Kranti was selected to assess the morphological, physiological and biochemical responses under drought at different levels of water stress, as it is a common clone used to be grown in Uttarakhand for making paper and plywood. The cuttings of Populus deltoides L. (clone Kranti) were exposed to four different watering regimes (100, 75, 50 and 25% of the field capacity) and changes in physiological and biochemical parameters related with drought tolerance were recorded. Alterations in physiological (i.e. decrease in relative water content) and biochemical parameters (i.e. increase in proline and soluble sugar content and build-up of malondialdehyde by-products) occurred in all the three levels of water stress, although drought represented the major determinant. Drought treatments (75%, 50% and 25% FC) decreased plant height, radial stem diameter, harvest index, total biomass content and RWC in all the three watering regimes compared to control (100% FC). Biochemical parameters like proline, soluble sugar and MDA content increased with severity and duration of stress, which helped plants to survive under severe stress. It was analyzed that for better wood yield poplar seedlings should avail either optimum amount of water (amount nearly equal to field capacity of soil) or maximum withdrawal up to 75% of field capacity up to seedling establishment period (60 days). Furthermore, this study manifested that acclimation to drought stress is related with the rapidity, severity, and duration of the drought event of the poplar species.

Hydroclimatic drivers of the growth of riparian cottonwoods at the prairie margin: River flows, river regulation and the Pacific Decadal Oscillation

Cottonwoods, riparian poplars, are facultative phreatophytes and can obtain water from shallow soil moisture originating from rainfall, or from the deeper capillary fringe above the alluvial water table that is recharged by river water infiltration. The correspondence between cottonwood growth and river flows should reveal the dependency upon alluvial groundwater and subsequently, the vulnerability to reduced river flows. To explore this association, we analyzed historic growth patterns of plains cottonwoods (Populus deltoides) along the Red Deer River (RDR), which is at the northwestern limit of the North American Great Plains. We developed chronologies of yearly radial increments (RI) and basal area increments (BAI) and explored correspondences with the environmental records from the past century. In this semi-arid region, the RI or BAI were not correlated with local precipitation while negative correlation with growth season temperature (T) (r = −0.37, p < 0.01) could reflect reduced growth with hot summers. There was correlation between growth and annual river discharge (Q, and particularly log Q that approximates river stage) and this increased with two year averaging (r = 0.51, p < 0.01), reflecting carry-over in the watershed hydrology and in the ecophysiological response. There was correspondence with the Pacific Decadal Oscillation index (PDO, r = −0.45, p < 0.01), which provides multi-decade transitions that influence Rocky Mountain headwater precipitation and other weather characteristics, and river flows. The combination of Q, PDO and T provided the strongest multiple regression model, accounting for 44% of the historic growth variation (52% correspondence for 1953–2013). The RDR was dammed in 1983, enabling winter flow augmentation, but summer flows were sustained and cottonwood growth and the streamflow correspondence persisted. This indicates that it is the pattern of dam operation and not damming per se that determines the fate of established riparian cottonwoods downstream. This study revealed that these cottonwoods are phreatophytic and dependent upon alluvial groundwater that is recharged from the river. This provides a research strategy to determine whether riparian woodlands along other regulated rivers are similarly groundwater-dependent and could be vulnerable to river flow reductions from excessive water withdrawal for irrigation or other uses, or with climate change.

Soil Aggregation and Organic Carbon Dynamics in Poplar Plantations

Soil resident water-stable macroaggregates (diameter (Ø) &gt; 0.25 mm) play a critical role in organic carbon conservation and fertility. However, limited studies have investigated the direct effects of stand development on soil aggregation and its associated mechanisms. Here, we examined the dynamics of soil organic carbon, water-stable macroaggregates, litterfall production, fine-root (Ø &lt; 1 mm) biomass, and soil microbial biomass carbon with stand development in poplar plantations (Populus deltoides L. ‘35’) in Eastern Coastal China, using an age sequence (i.e., five, nine, and 16 years since plantation establishment). We found that the quantity of water-stable macroaggregates and organic carbon content in topsoil (0–10 cm depth) increased significantly with stand age. With increasing stand age, annual aboveground litterfall production did not differ, while fine-root biomass sampled in June, August, and October increased. Further, microbial biomass carbon in the soil increased in June but decreased when sampled in October. Ridge regression analysis revealed that the weighted percentage of small (0.25 mm ≤ Ø &lt; 2 mm) increased with soil microbial biomass carbon, while that of large aggregates (Ø ≥ 2 mm) increased with fine-root biomass as well as microbial biomass carbon. Our results reveal that soil microbial biomass carbon plays a critical role in the formation of both small and large aggregates, while fine roots enhance the formation of large aggregates.

PHYSIOLOGICAL CHARACTERIZATION OF Rosellinia bunodes AND SYMPTOMATOLOGY OF Rosellinia ROOT ROT IN POPLAR SEEDLINGS

ABSTRACT Poplar (Populus deltoides) is a forest species that has several phytosanitary problems, such as leaf spots, rusts and root rots. Since 2010, the death of poplar trees has been observed in commercial plantations in the state of Paraná, Brazil, caused by the fungus Rosellinia bunodes. Due to the lack of information about this pathosystem, the aim of this work was to carry out the physiological characterization of R. bunodes isolates collected from P. deltoides and the symptomatological characterization of Rosellinia root rot in the same host. Experiments were conducted at Embrapa Florestas, located in Colombo (PR), Brazil. The mycelial growth of nine R. bunodes isolates was evaluated in four culture media (potato-dextrose-agar, V8-agar, carrot-agar and water-agar) and seven different incubation temperatures (8, 12, 16, 20 24, 28 and 32 °C). The symptomatological characterization of Rosellinia root rot was performed on six-month-old poplar seedlings. The most favorable conditions for mycelial growth of R. bunodes were observed in potato dextrose agar (PDA) at 24 °C. The symptoms and signs of the disease internally in the stem showed up at 7 days after inoculation (DAI); however, chlorosis and wilting were observed only at 14 DAI. Sexual and asexual reproductive structures of R. bunodes were not observed on inoculated plants.

Degradation of atrazine and changes in soil biological indices throughout dendroremediation using poplars

Dendroremediation, a novel strategy for cleaning up contaminants from the environment by using special woody plant species and microbes, is a popular phytoremediation approach. It is a cost-effective and environmentally friendly method that is being increasingly adopted. Poplar species (Populus L.) have been suggested for use in remediation because of their characteristics of high biomass production, fast growth, and potential for removing pollutants. Our environment is often contaminated by toxic substances produced by human activities, and remediation of contamination is therefore a global issue. Atrazine is one of the most widely used herbicides in China. In the present study, ‘I-69/55’ poplar (P. deltoides cv. ‘I-69/55’) and hybrid poplar (Populus deltoides × nigra, DN34) grown in pots were assayed for their ability to remediate atrazine-contaminated soils. The degradation dynamics of atrazine were assessed with a high-performance liquid chromatography system using materials from a greenhouse with different rhizosphere environments. We studied the dynamic variation in microbes and microbial biomass carbon to elucidate the rhizosphere effects and mechanism of remediation of atrazine-contaminated soil by poplar. Our four treatments included a control with uncontaminated soil without a tree, atrazine pollution without a tree, atrazine pollution with ‘I-69/55’ poplar, and atrazine pollution with hybrid poplar. Hybrid poplar showed potential for remediation of atrazine-contaminated soil, and the degradation of atrazine in the rhizosphere was faster than that in non-rhizosphere soil. Atrazine significantly inhibited bacteria growth in non-rhizosphere soil. The high concentration of bacteria in the hybrid poplar rhizosphere might be key to atrazine degradation. Trends of change among fungi and actinomyces did not correspond to trends in atrazine degradation throughout the trial period. Further research is needed to predict the effects of atrazine on cultivable microorganisms in various soils. Atrazine had significant inhibitory effects on microbial biomass carbon in non-rhizosphere soil, and the rhizosphere environment of poplars enhanced the recovery of microbial biomass carbon. The potential for hybrid poplar as a dendroremediation material needs further study.

Functional Analyses of PtROS1-RNAi in Poplars and Evaluation of Its Effect on DNA Methylation

DNA methylation occurs mostly at the C5 position of dinucleotide symmetric CpG sites in genomic DNA. A balance is maintained in the plant genome between DNA methylation mediated by RNA-directed DNA methylation (RdDM) and DNA demethylation mediated by the DEMETER (DME) protein family and REPRESSOR OF SILENCING (ROS1). We used double-stranded RNA (dsRNA) silencing to suppress ROS1 protein expression in ‘Nanlin895’ (Populus deltoides × Populus euramericana ‘Nanlin895’). Leaves of WT and transformant poplars revealed more symmetric methylation on CpG sites than roots and stems. In addition, leaves of transformant poplars revealed more methylated CpG sites in both 5.8S rDNA and histone H3 compared to WT types via 0, 50 and 100 mM NaCl treatments. In asymmetric methylation sites, transformant poplars exhibited more methylated CpHpG and CpHpH contexts than WT poplars. On the other hand, hypermethylation induced by PtROS1-RNAi construct resulted in pleiotropic phenotypic changes in transgenic poplars. The percentage of wavy leaves was increased maximum by ~45% in transgenic poplars. Also, the number of leaves was increased by ~200 number in transformants. Furthermore, shooting (%) and rooting (%) was decreased in transgenic poplars versus WT.

Poplar leaf rust reduces dry mass accumulation and internal nitrogen recycling more markedly under low soil nitrogen availability, and decreases growth in the following spring.

Rust is one of the most important biotic stress factors that affect poplars. The aims of this work were: (i) to analyze the changes in growth and nitrogen (N) accumulation in Populus deltoides W. Bartram ex Marshall plants infected with rust (Melampsora medusae Thümen.) and to determine how internal N stores are affected by the disease, in plants growing under two N availabilities in the soil; and (ii) to evaluate the impact of rust in the early sprout in the following growing season and the cumulative effect of the disease after repeated infections. Two clones with different susceptibility to rust were analyzed. At leaf level, rust reduced gas exchange capacity, water conductance in liquid phase and photosynthetic rate in both clones. At plant level, rust reduced plant growth, accelerated leaf senescence and abscission occurred with a higher concentration of leaf N. Even though N concentration in stems and roots were not significantly reduced by rust, total N accumulation in perennial tissues was reduced in infected plants. The vigor of the early sprout of plants infected by rust in the previous season was lower than that of non-infected plants. Therefore, rust affects plant growth by reducing the photosynthetic capacity and leaf area duration, and by decreasing internal nutrient recycling. As nutrient reserves in perennial tissues are lower, rust infection reduces not only the growth of the current season, but also has a cumulative effect on the following years. The reduction of growth was similar in both clones. High availability of N in the soil had no effect on leaf physiology but increased plant growth, delayed leaf senescence and abscission, and increased total N accumulation. If fertilization increases plant growth (stem and root dry mass) it can mitigate the negative effect of the pathogen in the reduction of nutrient storages and future growth.

Methanogenic Archaea dominate mature heartwood habitats of Eastern Cottonwood (Populus deltoides).

While recent reports demonstrate that the direct emission of methane from living tree trunks may be a significant terrestrial emission source, there has been debate whether tree emissions are due to transport from soils or produced in the wood environment itself. Reports of methanogens from wood of trees were prominent in the literature 40years ago but have not been revisited with molecular ecology approaches. We examined communities associated with Populus deltoides using rRNA gene sequence analyses and how these vary with tree and wood properties. Our data indicate that wood environments are dominated by anaerobic microbiomes. Methanogens are prominent in heartwood (mean 34% relative abundance) compared to sapwood environments (13%), and dominant operational taxonomic units (OTUs) were classified as the Methanobacterium sp. Members of the Firmicutes phylum comprised 39% of total sequences and were in 42% greater abundance in sapwood over heartwood niches. Tree diameter was the strongest predictor of methanogen abundance, but wood moisture content and pH were also significant predictors of taxon abundance and overall community composition. Unlike microbiomes of the soil, rhizosphere and phyllosphere, wood associated communities are shaped by unique environmental conditions and may be prominent and overlooked sources of methane emissions in temperate forest systems.

Distributed Plant Hydraulic and Hydrological Modeling to Understand the Susceptibility of Riparian Woodland Trees to Drought‐Induced Mortality

AbstractThe mechanistic understanding of drought‐induced forest mortality hinges on improved models that incorporate the interactions between plant physiological responses and the spatiotemporal dynamics of water availability. We present a new framework integrating a three‐dimensional groundwater model, Parallel Flow, with a physiologically sophisticated plant model, Terrestrial Regional Ecosystem Exchange Simulator. The integrated model, Parallel Flow‐Terrestrial Regional Ecosystem Exchange Simulator, was demonstrated to quantify the susceptibility of riparian cottonwoods (Populus angustifolia, Populus deltoides, and native hybrids) in southwestern Canada to sustained atmospheric drought and variability in stream flow. The model reasonably captured the dynamics of soil moisture and evapotranspiration in both wet and dry years, including the resilience of cottonwoods despite their high vulnerability to xylem cavitation. Unrealistic predictions of mortality could be generated when ignoring lateral groundwater flow. Our results also illustrated a mechanistic linkage between streamflow and cottonwood health. In the absence of precipitation, normal streamflow could sustain 94% of cottonwoods, and higher streamflows would be required to sustain all of the floodplain cottonwoods. Further, the risk of mortality was mediated by plant hydraulic properties. These results underpin the importance of integrating groundwater processes and plant hydraulics in order to analyze the forest response to sustained severe drought, which could increase in the future due to climate change combined with increasing river water withdrawals.