Photoperiod Sensitivity Research Articles

The evening complex promotes maize flowering and adaptation to temperate regions.

Maize (Zea mays) originated in southern Mexico and has spread over a wide latitudinal range. Maize expansion from tropical to temperate regions has necessitated a reduction of its photoperiod sensitivity. In this study, we cloned a quantitative trait locus (QTL) regulating flowering time in maize and show that the maize ortholog of Arabidopsis thaliana EARLY FLOWERING3, ZmELF3.1, is the causal locus. We demonstrate that ZmELF3.1 and ZmELF3.2 proteins can physically interact with ZmELF4.1/4.2 and ZmLUX1/2, to form evening complex(es; ECs) in the maize circadian clock. Loss-of-function mutants for ZmELF3.1/3.2 and ZmLUX1/2 exhibited delayed flowering under long-day and short-day conditions. We show that EC directly represses the expression of several flowering suppressor genes, such as the CONSTANS, CONSTANS-LIKE, TOC1 (CCT) genes ZmCCT9 and ZmCCT10, ZmCONSTANS-LIKE 3, and the PSEUDORESPONSE REGULATOR (PRR) genes ZmPRR37a and ZmPRR73, thus alleviating their inhibition, allowing florigen gene expression and promoting flowering. Further, we identify two closely linked retrotransposons located in the ZmELF3.1 promoter that regulate the expression levels of ZmELF3.1 and may have been positively selected during postdomestication spread of maize from tropical to temperate regions during the pre-Columbian era. These findings provide insights into circadian clock-mediated regulation of photoperiodic flowering in maize and new targets of genetic improvement for breeding.

Competitive ability of western Canadian spring wheat cultivars in a model weed system

Economic and social pressures are spurring the study of alternate weed management strategies such as the development of competitive crop cultivars, capable of being used under an integrated management plan. The primary objective of this research was to determine whether western Canadian spring wheat ( Triticum spp.) cultivars differ in their ability to compete against model weeds and whether those differences were expressed when challenged with wild weeds. A total of 71 wheat cultivars were grown in the absence or presence of simulated [cultivated oat ( Avena sativa L.) and oriental mustard ( Brassica juncea L.)] or natural [wild oat ( Avena fatua L.)] weed competition conditions. Significant ( p = 0.01) weed by cultivar interactions involving changes in yield cultivar rank were detected, indicating that the cultivars responded differently to competition. A small minority of cultivars such as Glenlea, CDC Rama, Genesis, AC Taber, AC Vista, Plenty, Napoleon, and BW652 had high-yield potential coupled with yield maintenance under weed pressure. The competitive ability advantage appeared to be associated with plant height or tillers per square meter as well as shorter vernalization requirement combined with photoperiod sensitivity. These outlier cultivar differences could be exploited in breeding new widely adapted varieties for scenarios where reduced herbicide weed control is desired, including situations where herbicide resistance limits chemical options. Cultivars with differing competitive ability under model weed conditions maintained their ranking when challenged by natural weed infestations. This suggests that selecting competitive spring wheat cultivars using a repeatable protocol based on model weeds is realistic.

The Association of Grain Yield and Agronomical Traits with Genes of Plant Height, Photoperiod Sensitivity and Plastid Glutamine Synthetase in Winter Bread Wheat (Triticum aestivum L.) Collection.

The reduction in plant height caused by mutations in Rht-B1 or Rht-D1 (Reduced height-1) genes in combination with day-length-independent early flowering associated with the Ppd-D1 (Photoperiod-D1) gene were the main factors of the drastic yield increase in bread wheat in the 1960s. Increasing nitrogen use efficiency as well as maintaining high yields under conditions of global climate change are the modern goals of wheat breeding. The glutamine synthetase (GS) enzyme plays a key role in ammonium assimilation in plants. In previous studies, the TaGS2-A1 gene, coding the plastid isoform of GS, was shown to be connected with nitrogen use efficiency in wheat. Using the polymerase chain reaction (PCR) markers, the association of yield and agronomical traits with haplotypes of Rht-B1, Rht-D1, Ppd-D1 and TaGS2-A1 genes was studied in a diverse collection of winter bread wheat cultivars grown in Krasnodar (Russia). In the three-year experiment, semidwarfism and photoperiod insensitivity were confirmed to be highly favorable for the grain yield. The TaGS2-A1b haplotype had a tendency for increased grain yield and lodging resistance, but mainly in plants not possessing the ‘green revolution’ alleles. Thus, TaGS2-A1b may have potential in breeding wheat cultivars with alternative dwarfing genes or tall cultivars, which may be optimal for growing under certain environments.

Isolation and identification of SiCOL5, which is involved in photoperiod response, based on the quantitative trait locus mapping of Setaria italica.

Foxtail millet (Setaria italica) is a versatile grain and fodder crop grown in arid and semi-arid regions. It is an especially important crop for combating malnutrition in certain poverty-stricken areas of the world. Photoperiod sensitivity is a major constraint to the distribution and utilization of foxtail millet germplasm resources. Foxtail millet may be suitable as a model species for studying the photoperiod sensitivity of C4 crops. However, the genetic basis of the photoperiod response of foxtail millet remains poorly studied. To detect the genetic basis of photoperiod sensitivity-related traits, a recombinant inbred line (RIL) population consisting of 313 lines derived from a cross between the spring-sown cultivar “Longgu 3” and the summer-sown cultivar “Canggu 3” was established. The RIL population was genotyped using whole-genome re-sequencing and was phenotyped in four environments. A high-density genetic linkage map was constructed with an average distance between adjacent markers of 0.69 cM. A total of 21 quantitative trait loci (QTLs) were identified by composite interval mapping, and 116 candidate genes were predicted according to gene annotations and variations between parents, among which three genes were considered important candidate genes by the integration and overall consideration of the results from gene annotation, SNP and indel analysis, cis-element analysis, and the expression pattern of different genes in different varieties, which have different photoperiod sensitivities. A putative candidate gene, SiCOL5, was isolated based on QTL mapping analysis. The expression of SiCOL5 was sensitive to photoperiod and was regulated by biological rhythm-related genes. Function analysis suggested that SiCOL5 positively regulated flowering time. Yeast two-hybrid and bimolecular fluorescence complementation assays showed that SiCOL5 was capable of interacting with SiNF-YA1 in the nucleus.

The flowering of SDP chrysanthemum in response to intensity of supplemental or night-interruptional blue light is modulated by both photosynthetic carbon assimilation and photoreceptor-mediated regulation.

The photoreceptor-mediated photoperiodic sensitivity determines the obligate short-day flowering in chrysanthemum (Chrysanthemum morifolium Ramat.) when the night length is longer than a critical minimum, otherwise, flowering is effectively inhibited. The reversal of this inhibition by subsequent exposure to a short period of supplemental (S) or night-interruptional (NI) blue (B) light (S-B; NI-B) indicates the involvement of B light-received photoreceptors in the flowering response. Flowering is mainly powered by sugars produced through photosynthetic carbon assimilation. Thus, the light intensity can be involved in flowering regulation by affecting photosynthesis. Here, it is elucidated that the intensity of S-B or NI-B in photoperiodic flowering regulation of chrysanthemums by applying 4-h of S-B or NI-B with either 0, 10, 20, 30, or 40 μmol·m−2·s−1 photosynthetic photon flux density (PPFD) in a 10-h short-day (SD10) [SD10 + 4B or + NI-4B (0, 10, 20, 30, or 40)] or 13-h long-day (LD13) condition [LD13 + 4B or + NI-4B (0, 10, 20, 30, or 40)] provided by 300 ± 5 μmol·m−2·s−1 PPFD white (W) LEDs. After 60 days of photoperiodic light treatments other than the LD13 and LD13 + NI-4B (40), flowering with varying degrees was observed, although the SD10 gave the earliest flowering. And the LD13 + 4B (30) produced the greatest number of flowers. The flowering pattern in response to the intensity of S-B or NI-B was consistent as it was gradually promoted from 10 to 30 μmol m−2 s−1 PPFD and inhibited by 40B regardless of the photoperiod. In SD conditions, the same intensity of S-B and NI-B did not significantly affect flowering, while differential flowering inhibition was observed with any intensity of NI-B in LDs. Furthermore, the 30 μmol·m−2·s−1 PPFD of S-B or NI-B up-regulated the expression of floral meristem identity or florigen genes, as well as the chlorophyll content, photosynthetic efficiency, and carbohydrate accumulation. The 40B also promoted these physiological traits but led to the unbalanced expression of florigen or anti-florigen genes. Overall, the photoperiodic flowering in response to the intensity of S-B or NI-B of the SDP chrysanthemum suggests the co-regulation of photosynthetic carbon assimilation and differential photoreceptor-mediated control.

Analysis of Camellia oleifera transcriptome reveals key pathways and hub genes involved during different photoperiods

BackgroundCamellia oleifera Abel. (C. oleifera) is an important traditional woody species in China that produces edible oil. However, the current literature lacks a proper understanding of C. oleifera’s ability to adapt to different photoperiods.ResultsOur results indicate that the photoperiod can significantly impact flowering time in C. oleifera. We grew a total of nine samples under the short day condition (SD), middle day condition (MD) and long day condition (LD). Transcriptome analysis yielded 66.94 Gb of high-quality clean reads, with an average of over 6.73 Gb of reads for per sample. Following assembly, a total of 120,080 transcripts were obtained and 94,979 unigenes annotated. A total of 3475 differentially expressed genes (DEGs) were identified between the SD_MD, SD_LD, and MD_LD gene sets. Moreover, WGCNA identified ten gene modules. Genes in pink module (92 genes) were positively correlated with SD, and negatively correlated with both MD and LD. Genes in the magenta module (42 genes) were positively correlated with MD and negatively correlated with both LD and SD. Finally, genes in the yellow module (1758 genes) were positively correlated with both SD and MD, but negatively correlated with LD. KEGG enrichment analysis revealed that genes in the pink, magenta, and yellow modules were involved in flavonoid biosynthesis, amino sugar and nucleotide sugar metabolism and circadian rhythm pathways. Additionally, eight hub genes (GI, AP2, WRKY65, SCR, SHR, PHR1, ERF106, and SCL3) were obtained through network analysis. The hub genes had high connectivity with other photoperiod-sensitive DEGs. The expression levels of hub genes were verified by qRT-PCR analysis.ConclusionAn increase in light duration promotes earlier flowering of C. oleifera. Flavonoid biosynthesis, amino sugar and nucleotide sugar metabolism, and circadian rhythm pathways may function in the photoperiodic flowering pathway of C. oleifera. We also identified eight hub genes that may play a role in this pathway. Ultimately, this work contributes to our understanding of the photoperiodic flowering pathway of C. oleifera and further informs molecular breeding programs on the plant’s photoperiodic sensitivity.

Transcriptome profiling of barley and tomato shoot and root meristems unravels physiological variations underlying photoperiodic sensitivity.

The average sowing date of crops in temperate climate zones has been shifted forwards by several days, resulting in a changed photoperiod regime at the emergence stage. In the present study, we performed a global transcriptome profiling of plant development genes in the seedling stage of root and shoot apical meristems of a photoperiod-sensitive species (barley) and a photoperiod insensitive species (tomato) in short-day conditions (8h). Variant expression indicated differences in physiological development under this short day-length regime between species and tissues. The barley tissue transcriptome revealed reduced differentiation compared to tomato. In addition, decreased photosynthetic activity was observed in barley transcriptome and leaf chlorophyll content under 8h conditions, indicating a slower physiological development of shoot meristems than in tomatoes. The photomorphogenesis controlling cryptochrome gene cry1, with an effect on physiological differentiation, showed an underexpression in barley compared to tomato shoot meristems. This might lead to a cascade of suspended sink-source activities, which ultimately delay organ development and differentiation in barley shoot meristems under short photoperiods.

Identification of the <i>eam8</i> allele associated with photoperiod insensitivity in barley accessions from Japan

BACKGROUND: Cultivated plants grown in the northern regions of Russia are subject to strict requirements in terms of their ability to produce a high yield during short growing season. Important adaptive traits that affect crop yield are early maturity and insensitivity to photoperiod. The search and involvement in breeding programs of new sources of these valuable traits is a necessary step for the creation of new ecologically plastic varieties.
 THE AIM: To identify alleles of the Eam8 gene, which determine weak photoperiodic sensitivity, among Japanese barley accessions from the N.I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR) collection.
 MATERIALS AND METHODS: Screening of 200 barley accessions from Japan was carried out in a climatic chamber in order to identify plants with yellow color of seedlings a marker sign of the influence of the eam8 allele, which controls early maturity and low sensitivity to the photoperiod. The presumably photoperiod-insensitive accession was studied under conditions of long and short photoperiods and was studied by molecular methods.
 RESULTS: Phenotypic screening identified a presumably photoperiod-insensitive accession k-17545 (Jap.456). The photoperiodic sensitivity of the accession and the variety Mari (carrier of the recessive eam8 allele) were similar. Using molecular analysis, the eam8.k allele, occurred naturally in the cultivars Kinai 5 and Kagoshima Gold from Japan, was found in the k-17545 line. The Jap.456 was polymorphic by srorage proteins (hordein) patterns and RAPD profiles. In addition, previously undescribed SNPs in the eam8.k sequence were identified in individual plants.
 CONCLUSIONS: As a result of the study of 200 accessions of barley from Japan, accession k-17545 (Jap.456) was found, in which the eam8.k allele was identified, which controls weak sensitivity to the photoperiod.

Modeling sorghum-cowpea intercropping for a site in the savannah zone of Mali: Strengths and weaknesses of the Stics model

Intercropping is a key entry point for sustainable intensification of cropping systems in sub-Saharan Africa where variable rainfall conditions prevail. Crop simulation models can complement field experiments to assess the agronomic and environmental performances of intercropping systems under diverse climatic conditions, including hypothetical future climate. So far, crop models that can handle intercropping, such as STICS, have not often been extensively evaluated for tropical conditions and for species grown by farmers in sub-Saharan Africa. The objective of this study was to evaluate the performance of the calibrated STICS model to simulate sorghum-cowpea intercropping systems in rainfed conditions in West Africa. We used data from field experiments conducted at the N'Tarla Agronomic Station in Mali in 2017 and 2018. Two varieties of sorghum (local and improved) with contrasting photoperiod sensitivities were grown as sole crop and intercropped with cowpea, with additive design. Two sowing dates and two levels of mineral fertilization were also investigated. Model simulations were evaluated with observed data for phenology, leaf area index (LAI), aboveground biomass, grain yield and in-season soil moisture. Large variations in aboveground biomass of sorghum and cowpea was observed in the experiment (i.e. 3.5 – 9.6 t/ha for sorghum and 0.4–2.5 t/ha for cowpea), owing to the treatments (i.e. sole vs intercrop, early vs late sowing, no fertilizer input vs fertilizer input). Such variations were satisfactorily reproduced by the model, with EF of 0.81 in calibration and 0.58 in evaluation (with relative rRMSE of 23 % and 43 %) across crops. Sorghum AGB simulations were more accurate (rRMSE of 21 % and EF of 0.54) than cowpea AGB simulations (rRMSE of 25 % and EF of −0.09). The two main observed features of the intercropping system were well reproduced by the model. Firstly, cowpea and sorghum aboveground biomass decreased with intercropping compared with sole cropping, and the decrease in cowpea biomass was greater than the decrease in sorghum biomass. Secondly, despite a reduction in sorghum and cowpea yield, Land Equivalent Ratio of the intercropping for aboveground biomass was always above one. With regard to grain yield, observed LER was above one only in the non-fertilized treatment. The model failed at reproducing this behavior, probably because of insufficiently accurate calibration of the process leading to grain yield formation: rRMSE for grain yield was 49 % in calibration and 41 % in evaluation. Based on these findings, we discuss avenues to improve model calibration and use the model to explore options for sustainable intensification in land constrained sub-Saharan Africa. • Accurate STICS simulations of intercropped sorghum and cowpea aboveground biomass. • Inaccurate STICS simulations of intercropped sorghum and cowpea grain yield. • The model can be used to start exploring inter-annual performance of intercropping. • Experiments looking at N dynamics in intercropping needed to refine calibration.

ZmCCT haplotype H5 improves yield, stalk-rot resistance, and drought tolerance in maize.

The ZmCCT locus underlies both stalk-rot resistance and photoperiod sensitivity in maize (Zea mays L.). We previously introduced nine resistant ZmCCT haplotypes into seven elite but susceptible maize inbred lines (containing the haplotype H1) to generate 63 backcross families. Here, we continued backcrossing, followed by selfing, to develop 63 near-isogenic lines (NILs). We evaluated 22 of these NILs for stalk-rot resistance and flowering time under long-day conditions. Lines harboring the haplotype H5 outperformed the others, steadily reducing disease severity, while showing less photoperiod sensitivity. To demonstrate the value of haplotype H5 for maize production, we selected two pairs of NILs, 83B28H1/83B28H5 and A5302H1/A5302H5, and generated F1 hybrids with the same genetic backgrounds but different ZmCCT alleles: 83B28H1 × A5302H1, 83B28H1 × A5302H5, 83B28H5 × A5302H1, and 83B28H5 × A5302H5. We performed field trials to investigate yield/yield-related traits, stalk-rot resistance, flowering time, and drought/salt tolerance in these four hybrids. 83B28H5 × A5302H1 performed the best, with significantly improved yield, stalk-rot resistance, and drought tolerance compared to the control (83B28H1 × A5302H1). Therefore, the ZmCCT haplotype H5 has great value for breeding maize varieties with high yield potential, stalk-rot resistance, and drought tolerance.

Soybean GmHY2a encodes a phytochromobilin synthase that regulates internode length and flowering time.

Plant height and flowering time are important agronomic traits that directly affect soybean [Glycine max (L.) Merr.] adaptability and yield. Here, the Glycine max long internode 1 (Gmlin1) mutant was selected from an ethyl methyl sulfonate (EMS)-mutated Williams 82 population due to its long internodes and early flowering. Using bulked segregant analysis (BSA), the Gmlin1 locus was mapped to Glyma.02G304700, a homologue of the Arabidopsis HY2 gene, which encodes a phytochromobilin (PΦB) synthase involved in phytochrome chromophore synthesis. Mutation of GmHY2a results in failure of the de-etiolation response under both red and far-red light. The Gmlin1 mutant exhibits a constitutive shade avoidance response under normal light, and the mutations influence the auxin and gibberellin pathways to promote internode elongation. The Gmlin1 mutant also exhibits decreased photoperiod sensitivity. In addition, the soybean photoperiod repressor gene E1 is down-regulated in the Gmlin1 mutant, resulting in accelerated flowering. The nuclear import of phytochrome A (GmphyA) and GmphyB following light treatment is decreased in Gmlin1 protoplasts, indicating that the weak light response of the Gmlin1 mutant is caused by a decrease in functional phytochrome. Together, these results indicate that GmHY2a plays an important role in soybean phytochrome biosynthesis and provide insights into the adaptability of the soybean plant.

Linkage Mapping Reveals QTL for Flowering Time-Related Traits under Multiple Abiotic Stress Conditions in Maize.

Variation in flowering plays a major role in maize photoperiod adaptation during long-term domestication. It is of high value to investigate the genetic basis of maize flowering under a wide range of environmental conditions in order to overcome photoperiod sensitivity or enhance stress tolerance. A recombinant inbred line (RIL) population derived from a cross between Huangzaosi and Mo17, composed of 121 lines and genotyped by 8329 specifically developed markers, was field evaluated in two consecutive years under two planting densities (67,500 and 120,000 plants ha−1) and two water treatments (normal irrigation and drought stress at the flowering stage). The days to silking (DTS), days to anthesis (DTA), and anthesis to silking interval (ASI) were all evaluated. Within the RIL population, DTS and DTA expanded as planting density and water deficit increased. For DTA, DTS, ASI, and ASI-delay, a total of 22, 17, 21, and 11 QTLs were identified, respectively. More than two significant QTLs were identified in each of the nine chromosomal intervals. Under diverse conditions and locations, six QTLs (quantitative trait locus) for DTS and DTA were discovered in Chr. 8: 118.13–125.31 Mb. Three chromosome regions, Chr. 3: 196.14–199.89 Mb, Chr. 8: 169.02–172.46 Mb, and Chr. 9: 128.12–137.26 Mb, all had QTLs for ASI-delay under normal and stress conditions, suggesting their possible roles in stress tolerance enhancement. These QTL hotspots will promote early-maturing or multiple abiotic stress-tolerant maize breeding, as well as shed light on the development of maize varieties with a broad range of adaptations.

Flowering time and photoperiod sensitivity in rice: Key players and their interactions identified.

Flowering time and photoperiod sensitivity in rice: Key players and their interactions identified.

Fine Mapping and Functional Research of Key Genes for Photoperiod Sensitivity in Maize.

Maize is native to the tropics and is very sensitive to photoperiod. Planting in temperate regions with increased hours of daylight always leads to late flowering, sterility, leggy plants, and increased numbers of maize leaves. This phenomenon severely affects the utilization of tropical maize germplasm resources. The sensitivity to photoperiod is mainly reflected in differences in plant height (PH), ear height (EH), total leaf number (LN), leaf number under ear (LE), silking stage (SS), and anthesis stage (AT) in the same variety under different photoperiod conditions. These differences are more pronounced for varieties that are more sensitive to photoperiod. In the current study, a high-density genetic map was constructed from a recombinant inbred line (RIL) population containing 209 lines to map the quantitative trait loci (QTL) for photoperiod sensitivity of PH, EH, LN, LE, SS, and AT. A total of 39 QTL were identified, including three consistent major QTL. We identified candidate genes in the consensus major QTL region by combined analysis of transcriptome data, and after enrichment by GO and KEGG, we identified a total of four genes (Zm00001d006212, Zm00001d017241, Zm00001d047761, and Zm00001d047632) enriched in the plant circadian rhythm pathway (KEGG:04712). We analyzed the expression levels of these four genes, and the analysis results showed that there were significant differences in response under different photoperiod conditions for three of them (Zm00001d047761, Zm00001d006212 and Zm00001d017241). The results of functional verification showed that the expression patterns of genes rhythmically oscillated, which can affect the length of the hypocotyl and the development of the shoot apical meristem. We also found that the phenotypes of the positive plants were significantly different from the control plants when they overexpressed the objective gene or when it was knocked out, and the expression period, phase, and amplitude of the target gene also shifted. The objective gene changed its own rhythmic oscillation period, phase, and amplitude with the change in the photoperiod, thereby regulating the photoperiod sensitivity of maize. These results deepen our understanding of the genetic structure of photoperiod sensitivity and lay a foundation for further exploration of the regulatory mechanism of photoperiod sensitivity.

SEASONAL RESPONSES OF FLOWERING AND POD SETTING IN COWPEA (Vigna unguiculata L. Walp)

Seven varieties of cowpea, Vigna unguiculata L. Walp were studied in two field trials (the wet and dry seasons) in the 2021 cropping season in Agbor, South-South geopolitical zone of Nigeria, were laid out in a complete randomized block design (CRBD) with seven replications for seasonal responses of flowering and pod setting. The dry season crops were manually watered twice daily while the wet season crops were rain-fed. The study recorded that most of the cowpea genotypes grown in the wet season showed photoperiod sensitivity, flowering between 46.36 and 56.43 DAP with mean of 54.97 + 6.98. Pod setting was similar across genotypes but the number (9.64 + 8.29), while length of pods varied (14.66 + 2.83) as noted from field observations. Furthermore, Seeds per pod was not significant among varieties of the wet season but they were significant and among those of the dry season (9.37 + 5.17). Genotypes which flowered earlier produced higher number of pods per plant and gave better yield such as IT06K-149-1, IT98K-128-3, IT95K1072-57 and IT98K-506-1 with grain filling of 205.58, 186.3, 183.53 and 775.99 mean seeds respectively were consequently recommended for hybridization in cowpea breeding programmes in south-south Nigeria.

Photoperiod Sensitivity and Variability of Agromorphological Traits and Brix Content of Sweet Sorghum Cultivated in Burkina Faso under Two Sowing Dates

Sweet sorghum is mainly cultivated for the sweetness of its stems and the quality of its fodder. Unfortunately, its cultivation is gradually being abandoned in Burkina Faso due to climatic hazards. In a general context of strong variations in the rainfall regime, it is, therefore, important to determine the effect of the sowing period on the expression of agromorphological traits and Brix content. Thus, 29 sweet sorghum accessions were evaluated using 15 quantitative variables in a three-replicate Fisher block design with two sowing dates spaced 25 days apart. The results of the study showed that only stalk length (pr. = 0.519) and internode length (pr. = 0.367) were not significantly influenced by sowing date. Indeed, delayed sowing resulted in an increase in the number of vegetative (+2.44) and useful (+1.3) tillers, as well as Brix (+1.16%). However, a reduction in leaf area (−4.35 cm × 1.43 cm), plant height (−85.69 cm), panicle length (−2.63 cm), and panicle weight (−6.19 g), as well as a reduction in the sowing-to-flowering cycle from 3 to 21 days, was obtained at the second sowing date. Thus, all accessions are sensitive to photoperiod with photoperiodic coefficients varying from 0.19 (GB02) to 0.93 (BSA5). These results could be exploited in the sweet sorghum improvement program.

High-density genetic mapping identified a major locus for environmental sex expression in pumpkin (Cucurbita moschata Duch.)

Long-day length and high temperature inhibit sex expression in pumpkin (Cucurbita moschata Duch.), and therefore directly impact the production potential. In this study, female flowering patterns in photoperiod-insensitive (PPIS) and photoperiod-sensitive (PPS) germplasms differed significantly in a moderately long day and high temperature environment. However, both germplasms exhibited a similar response in short day with either low temperature or high temperature environment. Photoperiod sensitivity led to this difference in sex expression between the germplasms. For the traits of 1st female flowering node (FFFN) and number of female flowers (NFF), high-density linkage map construction and quantitative trait locus (QTL) mapping were performed using SLAF-seq technology and 162 F2 individuals generated from PPIS and PPS. In total, 4 655 SLAFs were selected and mapped on 20 linkage groups (LGs). The total map length was 2 502.01 cM with an average interval distance of 0.75 cM. Major QTLs for both FFFN and NFF were detected on LG6 with intervals of 7.89 and 17.67 cM and PVE values of 30.5% and 22.9%, respectively. Further analyses of the major locus for FFFN revealed 73 protein-coding genes. Among them, 4 were related to sex expression, photoperiod flowering, and hormone response. An InDel (insertion and deletion) marker partially correlated with FFFN of the F2 population was also developed. Our study identified the QTL for the sex expression response to environmental factors using the high-density linkage map. The identified candidate genes and markers will provide useful information about the molecular interaction between the environment and sex expression and for marker-assisted selection of pumpkin environment-insensitive resources.

Modified photoperiod response of CsFT promotes day neutrality and early flowering in cultivated cucumber.

Map-based cloning and photoperiod response detection suggested that CsFT is the critical gene for cucumber photoperiod domestication. Photoperiod sensitivity is important for sensing seasonal changes and local adaptation. However, day-length sensitivity limits crop geographical adaptation and it should be modified during domestication. Cucumber was domesticated in southern Asia and is currently cultivated worldwide across a wide range of latitudes, but its photoperiod sensitivity and its change during cucumber domestication are unknown. Here, we confirmed wild cucumber (Hardwickii) was a short-day plant, and its flowering depends on short-day (SD) conditions, while the cultivated cucumber (9930) is a day-neutral plant that flowers independently of day length. A photoperiod sensitivity locus (ps-1) was identified by the 9930 × Hardwickii F2 segregating populations, which span a ~ 970kb region and contain 60 predicted genes. RNA-seq analysis showed that the critical photoperiod pathway gene FLOWERING LOCUS T (CsFT) within the ps-1 locus exhibits differential expression between 9930 and Hardwickii, which was confirmed by qRT-PCR detection. CsFT in Hardwickii was sensitive to day length and could be significantly induced by SD conditions, whereas CsFT was highly expressed in 9930 and was insensitive to day length. Moreover, the role of CsFT in promoting flowering was verified by overexpression of CsFT in Arabidopsis. We also identified the genetic variations existing in the promoter of CsFT among the different geographic cucumbers and suggest they have possible roles in photoperiod domestication. The results of this study suggest that a variation in photoperiod sensitivity of CsFT is associated with day neutrality and early flowering in cultivated cucumber and could contribute to cucumber cultivation in diverse regions throughout the world.

Low temperature and short daylength interact to affect the leaf senescence of two temperate tree species.

Temperature and photoperiod are two major environmental cues shaping the leaf senescence of temperate tree species. However, how the control of leaf senescence is split between photoperiod and temperature is unknown for many ecologically important species. Here, we conducted a growth chamber experiment to test the effects of temperature (6, 9, 18 and 21°C) and photoperiod (8 and 16h daylength) on leaf senescence of two temperate tree species (Quercus mongolica Fisch. and Larix principis-rupprechtii Mayr.) distributed in montane forest of China. The results showed that low temperature (LT) alone could induce leaf senescence of both species under long daylength (LD) conditions, but the leaf senescence of L. principis-rupprechtii was more sensitive to the decrease in temperature than that of Q. mongolica under the LD condition. Short daylength (SD) alone could only induce the leaf senescence of L. principis-rupprechtii, suggesting that the photoperiod sensitivity varies between species. SD could accelerate the LT-induced senescence, but the effect of SD reduced with the decrease in temperature. Based on these findings, we developed a new autumn phenology model by incorporating interspecific differences in the photoperiod sensitivity of leaf senescence. Compared with the three existing process-based autumn phenology models, the new model was more robust in simulating the experimental data. When employing these models to available long-term phenological data, our new model also performed best in reproducing the observed leaf senescence date of two closely related species (Quercus robur L. and Larix decidua Mill.). These results enhance our understanding of how LT and SD control leaf senescence. The prediction of the climate change impacts on forest carbon uptake could be improved by incorporating this new autumn phenological model into the terrestrial biosphere models.

Population structure, allelic variation at Rht-B1 and Ppd-A1 loci and its effects on agronomic traits in Argentinian durum wheat

Exploring the genetic variability in yield and yield-related traits is essential to continue improving genetic gains. Fifty-nine Argentinian durum wheat cultivars were analyzed for important agronomic traits in three field experiments. The collection was genotyped with 3565 genome-wide SNPs and functional markers in order to determine the allelic variation at Rht-B1 and Ppd-A1 genes. Population structure analyses revealed the presence of three main groups, composed by old, modern and genotypes with European or CIMMYT ancestry. The photoperiod sensitivity Ppd-A1b allele showed higher frequency (75%) than the insensitivity one Ppd-A1a (GS105). The semi-dwarfism Rht-B1b and the Ppd-A1a (GS105) alleles were associated with increases in harvest index and decreases in plant height, grain protein content and earlier heading date, although only the varieties carrying the Rht-B1 variants showed differences in grain yield. Out of the two main yield components, grain number per plant was affected by allelic variants at Rht-B1 and Ppd-A1 loci, while no differences were observed in thousand kernel weight. The increases in grain number per spike associated with Rht-B1b were attributed to a higher grain number per spikelet, whereas Ppd-A1a (GS105) was associated with higher grain number per spikelet, but also with lower spikelets per spike.