Oxygen Minimum Zone Off Research Articles

Hypoxia-tolerant zooplankton may reduce biological carbon pump efficiency in the Humboldt current system off Peru

In the ocean, downward flux of particles produced in sunlit surface waters is the major component of the biological carbon pump, which sequesters atmospheric carbon dioxide and fuels deep-sea ecosystems. The efficiency of downward carbon transfer is expected to be particularly high in tropical upwelling systems where hypoxia occurring beneath the productive surface waters is thought to hamper particle consumption. However, observations of both particle feeders and carbon export in low-oxygen waters are scarce. Here, we provide evidence that hypoxia-tolerant zooplankton feed on sinking particles in the extensive Oxygen Minimum Zone (OMZ) off Peru. Using several arrays of drifting sediment traps and in situ imaging, we show geochemical and morphological transformations of sinking particles and substantial control of carbon export by zooplankton. Our findings challenge the assumption of a consistently efficient biological carbon pump in OMZs and further demonstrate the need to consider mesopelagic organisms when studying oceanic carbon sequestration.

On the interpretation of changes in the subtropical oxygen minimum zone volume off Chile during two La Niña events (2001 and 2007)

Oxygen minimum zones (OMZs) are extended oceanic regions for which dissolved oxygen concentration is extremely low. They are suspected to be expanding in response to global warming. However, currently, the mechanisms by which OMZ varies in response to climate variability are still uncertain. Here, the variability of the subtropical OMZ off central Chile of a regional coupled physical–biogeochemical regional model simulation was analyzed for the period 2000–2008, noting that its fluctuations were significant despite the relatively weak amplitude of the El Niño/Southern Oscillation (ENSO). In particular, the interannual variability in the OMZ volume (OMZVOL, defined as the volume with dissolved oxygen concentration (DO) ≤ 45μM) was approximately 38% larger than that of the seasonal cycle, with maximum and minimum anomalies of OMZVOL taking place during two cold La Niña (LN) years (2001 and 2007). The model analyses further reveal that these anomalies resulted from a combined effect of changes in (1) the oxygen-poor waters poleward transport by the Peru–Chile undercurrent (PCUC), (2) the intensity of quasi-zonal jets influencing the transport of water to and from the OMZ, and (3) the zonal DO transport related to mesoscale eddy activity. Specifically, the interannual variability of the PCUC modulated primarily the DO contents of the OMZ core [(DO) ≤ 20μM] and secondarily the OMZVOL, while cross-shore DO transport by the zonal jets and the eddy fluxes played a major role in ventilating and shaping the offshore extent of the OMZ. When the OMZVOL was maximum (minimum), the PCUC transport was slightly increased (reduced), which was associated with a reduction (increase) in the ventilation of the OMZ through negative (positive) anomalies of zonal advection and DO eddy fluxes. Our results demonstrate that significant natural interannual variability in the subtropical OMZ off Chile originates from the interplay between oceanic equatorial teleconnection (PCUC transport) and local non-linear dynamics (the zonal jets and mesoscale eddies).

Gradients and instability: Macrozoobenthic communities in the Benguela Upwelling System off Namibia

This is the most comprehensive study to date on the distribution of macrofaunal assemblages of the Oxygen Minimum Zone (OMZ) off Namibia, one of the least studied benthic marine macrofaunas in the world. OMZs are mid- and bottom-waters at continental margins characterized by dissolved oxygen concentrations lower than 0.5 ml O2 l−1. We present the distribution of macrofaunal assemblages between 17°S and 25°S latitudes and between 25 m and 1523 m water depth with a total of 534 taxa. We performed both abundance-based and biomass-based hierarchical clustering analysis, which differ slightly in the resulting assemblages. This difference is due to the greater importance of molluscs in the biomass-based clustering, while the abundance-based analysis seems to shift the importance to the short-lived crustaceans. The Namibian benthic macrofauna, in general, shows high total biomasses and high representativeness of molluscs compared to OMZs worldwide. Evidences suggest that temperature, depth, diffusive hydrogen sulphide flux, interseasonal dissolved oxygen average and dissolved oxygen seasonal variability as significant forces structuring benthic macrofauna in the Namibian shelf. Multivariate analysis defined 6 faunal assemblages. The deepest and shallowest assemblages were the most diverse, but biomass is low in the first and the highest in the second. The major assemblages within the OMZ core areas are found at an interseasonal average dissolved oxygen below 0.4 ml l−1, all of which co-occur quite frequently with diffusive hydrogen sulphide fluxes. Dead spots are found at an interseasonal average dissolved oxygen level below 0.05 ml l−1.

Nitrogen cycling activities during decreased stratification in the coastal oxygen minimum zone off Namibia.

Productive oxygen minimum zones are regions dominated by heterotrophic denitrification fueled by sinking organic matter. Microbial redox-sensitive transformations therein result in the loss and overall geochemical deficit in inorganic fixed nitrogen in the water column, thereby impacting global climate in terms of nutrient equilibrium and greenhouse gases. Here, geochemical data are combined with metagenomes, metatranscriptomes, and stable-isotope probing incubations from the water column and subseafloor of the Benguela upwelling system. The taxonomic composition of 16S rRNA genes and relative expression of functional marker genes are used to explore metabolic activities by nitrifiers and denitrifiers under decreased stratification and increased lateral ventilation in Namibian coastal waters. Active planktonic nitrifiers were affiliated with Candidatus Nitrosopumilus and Candidatus Nitrosopelagicus among Archaea, and Nitrospina, Nitrosomonas, Nitrosococcus, and Nitrospira among Bacteria. Concurrent evidence from taxonomic and functional marker genes shows that populations of Nitrososphaeria and Nitrospinota were highly active under dysoxic conditions, coupling ammonia and nitrite oxidation with respiratory nitrite reduction, but minor metabolic activity toward mixotrophic use of simple nitrogen compounds. Although active reduction of nitric oxide to nitrous oxide by Nitrospirota, Gammaproteobacteria, and Desulfobacterota was tractable in bottom waters, the produced nitrous oxide was apparently scavenged at the ocean surface by Bacteroidota. Planctomycetota involved in anaerobic ammonia oxidation were identified in dysoxic waters and their underlying sediments, but were not found to be metabolically active due to limited availability of nitrite. Consistent with water column geochemical profiles, metatranscriptomic data demonstrate that nitrifier denitrification is fueled by fixed and organic nitrogen dissolved in dysoxic waters, and prevails over canonical denitrification and anaerobic oxidation of ammonia when the Namibian coastal waters and sediment-water interface on the shelf are ventilated by lateral currents during austral winter.

Vertical distribution of zooplankton groups, with an emphasis on fish larvae, in the oxygen minimum zone off southern México (December 2020)

The distribution of zooplankton groups, with an emphasis on fish larvae, in the Oxygen Minimum Zone off southern Mexico (December 2020) was analyzed. A hydrographic section of five sampling stations was made in the confluence of Transitional Water and Tropical Surface Waters. In each station, horizontal zooplankton trawls on three different dissolved oxygen conditions (~100, < 44 and < 4.4 μmol kg −1 ) were carried out by a MOCNESS net (333 μm). The 100 μmol kg −1 oxypleth (oxic condition) was ~60 m depth along the section, but the 4.4 μmol kg −1 oxypleth (suboxic) rose southward from Transitional Water (~ 150 m) to Tropical Surface Water (~ 90 m), approaching the well oxygenated layer. The distribution of the zooplankton biomass, and the most abundant zooplankton groups (e.g. copepods, chaetognaths, ostracods, euphausiids) and fish larvae showed statistically significant differences ( P < 0.01) between the oxic (100 μmol kg −1 ) and the deeper suboxic conditions. The larvae of typically dominant fish species such as the bathypelagic Vinciguerria lucetia, Diogenichthys laternatus, Diaphus pacificus and Cubiceps pauciradiatus, were present only in the oxygenated depths in the Transitional Water, and were almost absent from all depths in the Tropical Surface Water, where the oxycline shoaled. These differences in larval fish abundance were found despite little change in chlorophyll a concentration (relative units “r.u.”) along the sections, indicating that the oxycline is a limiting factor for the fish larvae. The fish larvae results contrast with previous observations from the mouth of the Gulf of California, where some species have distributions independent of water column dissolved oxygen conditions, probably as a consequence of coastal processes. Overall, our results show that even within the OMZ, variations in oxycline depth have biological implications, particularly on meroplanktonic organisms. • Transitional Water and Tropical Surface Water converge in the OMZ off southern Mexico. • The suboxic layer (< 4.4 μmol kg −1 ) is close to the oxycline in Tropical Surface Water. • The highest zooplankton abundance is in the oxic layer. • Most fish larvae are in the oxic layer in the Transitional Water. • The suboxic water elevation impacts the meroplanktonic organisms (fish larvae).

Physical-chemical factors influencing the vertical distribution of phototrophic pico-nanoplankton in the Oxygen Minimum Zone (OMZ) off Northern Chile: The relative influence of low pH/low O2 conditions

The vertical distribution of phytoplankton is of fundamental importance in the structure, dynamic, and biogeochemical pathways in marine ecosystems. Nevertheless, what are the main factors determining this distribution remains as an open question. Here, we evaluated the relative influence of environmental factors that might control the coexistence and vertical distribution of pico-nanoplankton associated with the OMZ off northern Chile. Our results showed that in the upper layer Synechococcus-like cells were numerically important at all sampling stations. Pico-nano eukaryotes and phototrophic nanoflagellates (PNF) also showed high abundances in the upper layer decreasing in abundance down to the upper oxycline, while only Prochlorococcus showed high abundances under oxycline and within the oxygen-depleted layer. Statistical analyses evidenced that temperature, oxygen, and carbonate chemistry parameters (pH and dissolved inorganic carbon, DIC) influenced significantly the vertical distribution of phototrophic pico-nanoplankton. Additionally, we experimentally-evaluated the combined effect of low pH/low O2 conditions on a nanophytoplankton species, the haptophyte Imantonia sp. Under control conditions (pH = 8.1; O2 = 287.5 μM, light = 169.6 μEm−2s−1), Imantonia sp. in vivo fluorescence increased over fifty times, inducing supersaturated O2 conditions (900 μM) and an increasing pH (8.5), whereas upon an experimental treatment mimicking OMZ conditions (pH = 7.5; O2 = 55.6 μM; light = 169.6 μEm−2s−1), in vivo fluorescence declined dramatically, suggesting that Imantonia sp. did not survive. Although preliminary, our study provides evidence about the role of low pH/low O2 conditions on the vertical distribution of nanophytoplankton, which deserve future attention through both fieldwork and more extended experimental experiences.

Dimethylated sulfur compounds in the Peruvian upwelling system

Abstract. Our understanding of the biogeochemical cycling of the climate-relevant trace gas dimethyl sulfide (DMS) in the Peruvian upwelling system is still limited. Here we present oceanic and atmospheric DMS measurements which were made during two shipborne cruises in December 2012 (M91) and October 2015 (SO243) in the Peruvian upwelling region. Dimethylsulfoniopropionate (DMSP) and dimethyl sulfoxide (DMSO) were also measured during M91. DMS concentrations were 1.9 ± 0.9 and 2.5 ± 1.9 nmol L−1 in surface waters in October 2015 and December 2012, respectively. Nutrient availability appeared to be the main driver of the observed variability in the surface DMS distributions in the coastal areas. DMS, DMSP, and DMSO showed maxima in the surface layer, and no elevated concentrations associated with the oxygen minimum zone off Peru were measured. The possible role of DMS, DMSP, and DMSO as radical scavengers (stimulated by nitrogen limitation) is supported by their negative correlations with N:P (sum of nitrate and nitrite : dissolved phosphate) ratios. Large variations in atmospheric DMS mole fractions were measured during M91 (144.6 ± 95.0 ppt) and SO243 (91.4 ± 55.8 ppt); however, the atmospheric mole fractions were generally low, and the sea-to-air flux was primarily driven by seawater DMS. The Peruvian upwelling region was identified as a source of atmospheric DMS in December 2012 and October 2015. However, in comparison to the previous measurements in the adjacent regions, the Peru upwelling was a moderate source of DMS emissions at either time (M91: 5.9 ± 5.3 µmol m−2 d−1; SO243: 3.8 ± 2.7 µmol m−2 d−1).

Evidences and drivers of ocean deoxygenation off Peru over recent past decades

Deoxygenation is a major threat to the coastal ocean health as it impacts marine life and key biogeochemical cycles. Understanding its drivers is crucial in the thriving and highly exploited Peru upwelling system, where naturally low-oxygenated subsurface waters form the so-called oxygen minimum zone (OMZ), and a slight vertical shift in its upper limit may have a huge impact. Here we investigate the long-term deoxygenation trends in the upper part of the nearshore OMZ off Peru over the period 1970–2008. We use a unique set of dissolved oxygen in situ observations and several high-resolution regional dynamical-biogeochemical coupled model simulations. Both observation and model present a nearshore deoxygenation above 150 m depth, with a maximum trend of – 10 µmol kg−1 decade1, and a shoaling of the oxycline depth (− 6.4 m decade−1). Model sensitivity analysis shows that the modeled oxycline depth presents a non-significant (+ 0.9 m decade−1) trend when remote forcing is suppressed, while a significant oxycline shoaling (− 3 m decade−1) is obtained when the wind variability is suppressed. This indicates that the nearshore deoxygenation can be attributed to the slowdown of the near-equatorial eastward currents, which transport oxygen-rich waters towards the Peruvian shores. The large uncertainties in the estimation of this ventilation flux and the consequences for more recent and future deoxygenation trends are discussed.

Temperature and dissolved oxygen concentration in the Pacific Ocean at the northern region of the oxygen minimum zone off Mexico between the last two PDO cool phases

The changes in temperature and dissolved oxygen concentration in the Pacific Ocean in the northern region of the shallow oxygen minimum zone (OMZ) off Mexico were analyzed on the basis of the Word Ocean Database and a series of oceanographic cruises (LEGOZ-Mex). In order to test the changes in both parameters between two similar oceanographic scenarios according to the Pacific Decadal Oscillation (PDO), a comparison was made between the last two cool PDO phases of 1962–1974 and 2002–2012 when conditions might be expected to be relatively similar. Results show that the surface layer (upper layer of 50 m depth) has been warming significantly in two of the three areas included in this study: 1) the southern end of the California Current (0.8 °C; p < 0.001), 2) the southern Gulf of California (0.49 °C; p < 0.001), and 3) the Tropical Transitional Pacific (0.4 °C). Simultaneously, the water column has been deoxygenating significantly (p < 0.001), not only in the subsurface shallow OMZ layer (~ 100 to 300 m depth) in the Tropical Transitional area (− 45%), as has been recorded previously, but from 300 to 1000 m depth (by between −38% and - 57%). The exception was the California Current area at the northern limit of the shallow OMZ, where the deoxygenation was only significant (p < 0.001) from 300 to 1000 m depth (~ − 20%). We conclude that the significant warming of the surface layer in the Pacific OMZ off Mexico has increased the stratification of the water column and contributed to the deoxygenation of the interior ocean, at least between the last two cool phases of the PDO. These changes may be significantly affecting the marine biota that inhabit the shallow OMZs.

Dissolved Organic Matter in the Upwelling System off Peru: Imprints of Bacterial Activity and Water Mass Characteristics

AbstractMicrobial degradation of dissolved organic matter (DOM) contributes to the formation and preservation of oxygen minimum zones (OMZs) in the ocean, but information on the spatial distribution and molecular composition of DOM in OMZ regions is scarce. We quantified molecular components of DOM that is, dissolved amino acids (DAA) and dissolved combined carbohydrates (DCCHO), in the upwelling region off Peru. We found the highest concentrations of DCCHO in fully oxygenated surface waters steeply declining at shallow depth. The highest DAA concentrations were observed close to the surface also, but attenuation of DAA concentration over depth was less pronounced. Compositional changes of DCCHO were strongest within more oxygenated waters. Compositional changes of DAA were also evident under suboxic conditions (&lt;5 µmol O2 kg−1) and indicated bacterial peptide degradation. Moreover, specific free amino acids (alanine and threonine) were enhanced within suboxic waters, pointing to a potential production of dissolved organic nitrogen under suboxic conditions. Our results therewith suggest that deoxygenation supports a spatial decoupling of DCCHO and DAA production and degradation dynamics and give new insights to carbon and nitrogen cycling in the OMZ off Peru.

Living (stained) calcareous benthic foraminiferal assemblages ([formula omitted]) in a coastal upwelling zone of the Humboldt Current System, Northern Chile ([formula omitted]S)

In coastal upwelling ecosystems, understanding of environmental factors regulating the structure of benthic foraminiferal communities is fundamental to enhance our knowledge of their ecology and to validate their use in palaeoceanographic studies. In this study, we assess the influence of organic matter (quantity/quality) and subsurface oxygenation on living (stained) calcareous benthic foraminifera inhabiting a coastal upwelling ecosystem influenced by Oxygen Minimum Zone (OMZ) off Inglesa Bay, Northern Chile. Benthic foraminifera and their environment (i.e. biochemical/elemental sediment composition and subsurface water column oxygenation) were sampled along a transect perpendicular to the coastline consisting of three stations (30, 70 and 120 m) and covering two seasons (winter and summer). The geochemical composition of surface sediments and subsurface oxygenation reveal a typical pattern of marine ecosystems associated with coastal upwelling centers influenced by OMZ. Forty-seven species of living calcareous benthic foraminifera were identified, in which Bolivinella seminuda, Buliminella elegantissima, Bulimina marginata, and Nonionella miocenica were found as the most abundant species. Total abundance increases remarkably with depth while taxonomic richness and evenness decrease. Multivariate analyses show three benthic foraminiferal associations strongly linked to nutritive organic matter and subsurface oxygenation, regardless of the sampling period. Assemblages “A” (22 species, 4 dominant) and “C” (5 species, 1 dominant) are associated with the shallow (30 m) and deep (120 m) station, and present contrasting subsurface oxygenation and organic matter content. Assemblage “B” (19 species, 3 dominant) is associated with the intermediate station (70 m) characterized by mixed subsurface oxygenation and organic matter content. Our results suggest that local environment conditions (i.e. OMZ intensity, organic matter quality/quantity) govern the structure and composition of the living calcareous benthic foraminiferal assemblages of Inglesa Bay. Such assemblages have similarities and differences with other benthic foraminifera assemblages found in other coastal upwelling ecosystems impinged by an OMZ.

Sediment release of dissolved organic matter to the oxygen minimum zone off Peru

Abstract. The eastern tropical South Pacific (ETSP) represents one of the most productive areas in the ocean that is characterised by a pronounced oxygen minimum zone (OMZ). Particulate organic matter (POM) that sinks out of the euphotic zone is supplied to the anoxic sediments and utilised by microbial communities, and the degradation of POM is associated with the production and reworking of dissolved organic matter (DOM). The release of DOM to the overlying waters may, therefore, represent an important organic matter escape mechanism from remineralisation within sediments but has received little attention in OMZ regions so far. Here, we combine measurements of dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) with DOM optical properties in the form of chromophoric (CDOM) and fluorescent (FDOM) DOM from pore waters and near-bottom waters of the ETSP off Peru. We evaluate diffusion-driven fluxes and net in situ fluxes of DOC and DON to investigate processes affecting DOM cycling at the sediment–water interface along a transect at 12∘ S. To our knowledge, these are the first data for sediment release of DON and pore water CDOM and FDOM for the ETSP off Peru. Pore water DOC accumulated with increasing sediment depth, suggesting an imbalance between DOM production and remineralisation within sediments. High DON accumulation resulted in very low pore water DOC ∕ DON ratios (≤1) which could be caused by an “uncoupling” in DOC and DON remineralisation. Diffusion-driven fluxes of DOC and DON exhibited high spatial variability and ranged from 0.2±0.1 to 2.5±1.3 mmolm-2d-1 and from -0.04±0.02 to 3.3±1.7 mmolm-2d-1, respectively. Generally low net in situ DOC and DON fluxes, as well as a steepening of spectral inclination (S) of CDOM and an increase in humic-like DOM at the sediment–water interface over time, indicated active microbial DOM utilisation. The latter may potentially be stimulated by the presence of nitrate (NO3-) and nitrite (NO2-) in the water column. The microbial DOC utilisation rates, estimated in our study, are potentially sufficient to support denitrification rates of 0.2–1.4 mmolm-2d-1, suggesting that the sediment release of DOM may on occasion contribute to nitrogen loss processes in the ETSP off Peru.

The control of hydrogen sulfide on benthic iron and cadmium fluxes in the oxygen minimum zone off Peru

Abstract. Sediments in oxygen-depleted marine environments can be an important sink or source of bio-essential trace metals in the ocean. However, the key mechanisms controlling the release from or burial of trace metals in sediments are not exactly understood. Here, we investigate the benthic biogeochemical cycling of iron (Fe) and cadmium (Cd) in the oxygen minimum zone off Peru. We combine bottom water and pore water concentrations, as well as benthic fluxes determined from pore water profiles and from in situ benthic chamber incubations, along a depth transect at 12∘ S. In agreement with previous studies, both concentration–depth profiles and in situ benthic fluxes indicate a release of Fe from sediments to the bottom water. Diffusive Fe fluxes and Fe fluxes from benthic chamber incubations (−0.3 to −17.5 mmol m−2 yr−1) are broadly consistent at stations within the oxygen minimum zone, where the flux magnitude is highest, indicating that diffusion is the main transport mechanism of dissolved Fe across the sediment–water interface. The occurrence of mats of sulfur-oxidizing bacteria on the seafloor represents an important control on the spatial distribution of Fe fluxes by regulating hydrogen sulfide (H2S) concentrations and, potentially, Fe sulfide precipitation within the surface sediment. Rapid removal of dissolved Fe after its release to anoxic bottom waters hints at oxidative removal by nitrite and interactions with particles in the near-bottom water column. Benthic flux estimates of Cd suggest a flux into the sediment within the oxygen minimum zone. Fluxes from benthic chamber incubations (up to 22.6 µmol m−2 yr−1) exceed diffusive fluxes (&lt;1 µmol m−2 yr−1) by a factor of more than 25, indicating that downward diffusion of Cd across the sediment–water interface is of subordinate importance for Cd removal from benthic chambers. As Cd removal in benthic chambers covaries with H2S concentrations in the pore water of surface sediments, we argue that Cd removal is mediated by precipitation of cadmium sulfide (CdS) within the chamber water or directly at the sediment–water interface. A mass balance approach, taking the contributions of diffusive and chamber fluxes as well as Cd delivery with organic material into account, suggests that CdS precipitation in the near-bottom water could make an important contribution to the overall Cd mass accumulation in the sediment solid phase. According to our results, the solubility of trace metal sulfide minerals (Cd ≪ Fe) is a key factor controlling trace metal removal and, consequently, the magnitude and the temporal and spatial heterogeneity of sedimentary fluxes. We argue that, depending on their sulfide solubility, sedimentary source or sink fluxes of trace metals will change differentially as a result of declining oxygen concentrations and the associated expansion of sulfidic surface sediments. Such a trend could cause a change in the trace metal stoichiometry of upwelling water masses with potential consequences for marine ecosystems in the surface ocean.

Bacterial degradation activity in the eastern tropical South Pacific oxygen minimum zone

Abstract. Oxygen minimum zones (OMZs) show distinct biogeochemical processes that relate to microorganisms being able to thrive under low or even absent oxygen. Microbial degradation of organic matter is expected to be reduced in OMZs, although quantitative evidence is low. Here, we present heterotrophic bacterial production (3H leucine incorporation), extracellular enzyme rates (leucine aminopeptidase/β-glucosidase) and bacterial cell abundance for various in situ oxygen concentrations in the water column, including the upper and lower oxycline, of the eastern tropical South Pacific off Peru. Bacterial heterotrophic activity in the suboxic core of the OMZ (at in situ ≤ 5 µmol O2 kg−1) ranged from 0.3 to 281 µmol C m−3 d−1 and was not significantly lower than in waters of 5–60 µmol O2 kg−1. Moreover, bacterial abundance in the OMZ and leucine aminopeptidase activity were significantly higher in suboxic waters compared to waters of 5–60 µmol O2 kg−1, suggesting no impairment of bacterial organic-matter degradation in the core of the OMZ. Nevertheless, high cell-specific bacterial production was observed in samples from oxyclines, and cell-specific extracellular enzyme rates were especially high at the lower oxycline, corroborating earlier findings of highly active and distinct micro-aerobic bacterial communities. To assess the impact of bacterial degradation of dissolved organic matter (DOM) for oxygen loss in the Peruvian OMZ, we compared diapycnal fluxes of oxygen and dissolved organic carbon (DOC) and their microbial uptake within the upper 60 m of the water column. Our data indicate low bacterial growth efficiencies of 1 %–21 % at the upper oxycline, resulting in a high bacterial oxygen demand that can explain up to 33 % of the observed average oxygen loss over depth. Our study therewith shows that microbial degradation of DOM has a considerable share in sustaining the OMZ off Peru.

Larval Fish Habitats and Deoxygenation in the Northern Limit of the Oxygen Minimum Zone off Mexico

AbstractThe present state of deoxygenation in the northern limits of the shallow oxygen minimum zone off Mexico is examined in order to detect its effects on larval fish habitats and consider the sensitivity of fish larvae to decreased dissolved oxygen. A series of cruises between 2000 and 2017 indicated a significant vertical expansion of low oxygen waters. The upper limit of suboxic conditions (&lt;4.4 μmol/kg) has risen ~100 m at 19.5°N off Cabo Corrientes and ~50 m at 25°N in the mouth of the Gulf of California. The larval habitat distribution was related to the geographic variability of dissolved oxygen and water masses between these two latitudes. One recurrent larval habitat, with Bregmaceros bathymaster larvae as the indicator species, extended throughout the water column off Cabo Corrientes from Subtropical Subsurface Water (suboxic conditions) to the surface (220 μmol/kg). The second recurrent habitat was located between the oxycline (&gt;44 μmol/kg) and the surface in association with the Gulf of California Water, with Benthosema panamense as the indicator species. During the warm El Niño event of 2015–2016, a tropical larval fish habitat (Auxis spp.) associated with Tropical Surface Water appeared to change the larval habitat distributions. These results indicate that some species are resilient to changes of dissolved oxygen and temperature generated by El Niño events and by continuing deoxygenation, although other species with more limited environmental windows could be affected by deoxygenation, probably leading to a change of the pelagic ecosystem over time.

A suboxic chlorophyll-a maximum persists within the Pacific oxygen minimum zone off Mexico

The tropical Oxygen Minimum Zones (OMZ) are known to shelter a chlorophyll-a maximum (CM) within suboxic waters (<20 μmol kg−1), below other chlorophyll-a maxima and with an unknown temporal variability in the Pacific OMZ off Mexico. Here, 1161 chlorophyll-a fluorescence and oxygen profiles collected between 2003 and 2016 were used to describe statistically the physical situation in which the suboxic-CM was found. Results indicate that the suboxic-CM was a persistent feature at seasonal scale at depths between 40 and 190 m at an average density potential anomaly of 26 ± 0.2 kg m−3, related to the Subtropical Subsurface Water, which is nearly unaffected by mixing with other water masses. The suboxic-CM south of 21°N was generally associated with the upper limit of the suboxic waters of the OMZ. In this region, the distance between the suboxic waters and the euphotic zone (1% of surface irradiance) was > - 25 m year-round, which suggests that persistent low-light levels allow development of the suboxic-CM. The persistence of the suboxic-CM is consistent with its association with a stable microbial community. The effects on the ecosystem and biogeochemical cycles remain to be investigated.

Differential Distribution and Determinants of Ammonia Oxidizing Archaea Sublineages in the Oxygen Minimum Zone off Costa Rica.

Ammonia oxidizing archaea (AOA) are microbes that are widely distributed in the ocean that convert ammonia to nitrite for energy acquisition in the presence of oxygen. Recent study has unraveled highly diverse sublineages within the previously defined AOA ecotypes (i.e., water column A (WCA) and water column B (WCB)), although the eco-physiology and environmental determinants of WCB subclades remain largely unclear. In this study, we examined the AOA communities along the water columns (40–3000 m depth) in the Costa Rica Dome (CRD) upwelling region in the eastern tropical North Pacific Ocean. Highly diverse AOA communities that were significantly different from those in oxygenated water layers were observed in the core layer of the oxygen minimum zone (OMZ), where the dissolved oxygen (DO) concentration was < 2μM. Moreover, a number of AOA phylotypes were found to be enriched in the OMZ core. Most of them were negatively correlated with DO and were also detected in other OMZs in the Arabian Sea and Gulf of California, which suggests low oxygen adaptation. This study provided the first insight into the differential niche partitioning and environmental determinants of various subclades within the ecotype WCB. Our results indicated that the ecotype WCB did indeed consist of various sublineages with different eco-physiologies, which should be further explored.

Fish debris in sediments from the last 25 kyr in the Humboldt Current reveal the role of productivity and oxygen on small pelagic fishes

Upwelling of cold, nutrient-rich water from the oxygen minimum zone (OMZ) off Peru sustains the world’s highest production of forage fish, mostly composed of anchovy (Engraulis ringens). However, the potential impacts of climate change on upwelling dynamics and thus fish productivity in the near future are uncertain. Here, we reconstruct past changes in fish populations during the last 25,000 years to unravel their response to changes in OMZ intensity and productivity. We quantified and identified fish scales and bones deposited in laminated sediments from Pisco (Peru) with an average sampling resolution of 20.4 years (±7.1). The records span the Last Glacial Maximum to the recent Holocene and thus encompass a variety of combinations of productivity, oxygen, and global temperature. Our results reveal that productivity appears to be the main factor controlling small pelagic fish abundance, while sub-surface oxygenation affects mainly anchovy and likely sardine populations. Lower productivity and higher oxygen concentrations during the glacial resulted in lower total fish productivity, whereas higher productivity and a stronger OMZ in some time intervals during the Holocene resulted in higher fish abundances. A variety of different conditions between these two oceanographic end members indicate preferred environmental conditions for a variety of small pelagic fishes. There is no evidence in our record for an out of phase relationship between anchovy and sardine at the timescales examined in the present study. Anchovy have been the predominant small pelagic fish throughout the record, at least over centennial to millennial timescales. Its abundance reached a maximum during the Current Warm Period, an era characterized by high productivity and intense OMZ conditions. Thus, industrial fisheries developed during a period of exceptional productivity in relation to that of the last 25 kyr. The records reveal that dramatic decreases in pelagic fish abundances have occurred in response to past large-scale climate changes than those observed in the instrumental period, which suggests that future climate change may result in substantial changes in ecosystem structure.

Remote and local drivers of oxygen and nitrate variability in the shallow oxygen minimum zone off Mauritania in June 2014

Abstract. Upwelling systems play a key role in the global carbon and nitrogen cycles and are also of local relevance due to their high productivity and fish resources. To capture and understand the high spatial and temporal variability in physical and biogeochemical parameters found in these regions, novel measurement techniques have to be combined in an interdisciplinary manner. Here we use high-resolution glider-based physical–biogeochemical observations in combination with ship-based underwater vision profiler, sensor and bottle data to investigate the drivers of oxygen and nitrate variability across the shelf break off Mauritania in June 2014. Distinct oxygen and nitrate variability shows up in our glider data. High-oxygen and low-nitrate anomalies were clearly related to water mass variability and probably linked to ocean transport. Low-oxygen and high-nitrate patches co-occurred with enhanced turbidity signals close to the seabed, which suggests locally high microbial respiration rates of resuspended organic matter near the sea floor. This interpretation is supported by high particle abundance observed by the underwater vision profiler and enhanced particle-based respiration rate estimates close to the seabed. Discrete in situ measurements of dissolved organic carbon and amino acids suggest the formation of dissolved organic carbon due to particle dissolution near the seabed fueling additional microbial respiration. During June an increase in the oxygen concentration on the shelf break of about 15 µmol kg−1 was observed. These changes go along with meridional circulation changes but cannot be explained by typical water mass property changes. Thus our high-resolution interdisciplinary observations highlight the complex interplay of remote and local physical–biogeochemical drivers of oxygen and nitrate variability off Mauritania, which cannot be captured by classical shipboard observations alone.

Distribution of Meiofauna in Bathyal Sediments Influenced by the Oxygen Minimum Zone Off Costa Rica

Ocean deoxygenation has become a topic of increasing concern because of its potential impacts on marine ecosystems, including oxygen minimum zone (OMZ) expansion and subsequent benthic effects. We investigated the influence of oxygen concentration and organic matter (OM) availability on metazoan meiofauna within and below an OMZ in bathyal sediments off Costa Rica, testing the hypothesis that oxygen and OM levels are reflected in meiofaunal community structures and distribution. Mean total densities in our sampling cores (400-1800 m water depth) were highest with 3688 ind. 10 cm-2 at the OMZ core at 400 m water depth, decreasing rapidly downslope. Nematodes were overall dominant, with a maximum of 99.9% in the OMZ core, followed by copepods (13%), nauplii (4.8%), and polychaetes (3%). Relative copepod and nauplii abundance increased consistently with depth and increasing bottom-water O2. Meiofaunal composition was significantly different among sites, with lower taxonomic diversity at OMZ sites relative to deeper, oxygenated sites. Vertical distribution patterns within sediments showed that in strongly oxygen-depleted sites less meiofauna was concentrated in the surface sediment than at deeper slope sites. Highest meiofaunal abundance and lowest diversity occurred under lowest oxygen and highest pigment levels, whereas highest diversity occurred under highest oxygen-concentrations and low CPE, as well as high quality of sedimentary pigment (chl a/phaeo) and organic carbon (C/N). The lower meiofaunal diversity, and hence lower structural and trophic complexity, at oxygen-depleted sites raises concerns about changes in the structure and function of benthic marine ecosystems in the face of OMZ expansions.