Murray Cod Research Articles

Abstract Recreational fishery management aims to prevent species decline and provide sustainable fisheries. Overfishing has been frequently suggested as a cause of historic fishery declines within the Murray–Darling Basin (MDB), Australia, but there have been few quantitative surveys for providing fishery-dependent data to gauge status. The Murray Cod Maccullochella peelii and the Golden Perch Macquaria ambigua are important species targeted by recreational fishers across the MDB. The fisheries are controlled by size and bag limits and gear restrictions (both species) as well as a closed season (Murray Cod only). A complemented fisher survey design was used to assess the recreational fishery for both species in a 76-km reach of the Murrumbidgee River in 2012–2013. Progressive counts were used to quantify boat- and shore-based fishing effort. Catch and harvest rate information was obtained from shore-based fishers via roving surveys and from boat-based fishers via bus route surveys. Murray Cod catch rates (fish/angler-hour) were 0.228 ± 0.047 (mean ± SE; boat based) and 0.092 ± 0.023 (shore based), and harvest rates (fish/angler-hour) were 0.013 ± 0.006 (boat based) and 0.003 ± 0.001 (shore based). Golden Perch catch rates were 0.018 ± 0.009 (shore based) and 0.002 ± 0.001 (boat based), and harvest rates were 0.006 ± 0.002 (shore based) and 0.001 ± <0.001 (boat based). The Murray Cod fishery had maximal catch and harvest during the 5-month period after the closed season ended. The closed season aims to protect spawning Murray Cod, but this strategy's effectiveness may have been influenced by high fishing effort and deliberate bycatch during the closure period. To sustain and improve these MDB fisheries, we suggest quantification of catch-and-release impacts on spawning Murray Cod, provision of fish passage, re-stocking of Golden Perch, and education on fishing techniques that minimize Murray Cod bycatch during the closed season. Received October 22, 2014; accepted March 6, 2015

To quantify how electrofishing capture probability varies over time and across physiochemical and disturbance gradients in a turbid lowland river, we tagged between 68 and 95 fish·year−1 with radio transmitters and up to 424 fish·year−1 with external and passive integrated transponder (PIT) tags. We surveyed the site noninvasively using radiotelemetry to determine which of the radio-tagged fish were present (effectively closing the radio-tagged population to emigration) and then electrofished to estimate the proportion of available fish that were captured based on both this and standard mark–recapture methods. We replicated the electrofishing surveys three times over a minimum of 12 days each year, for 7 years. Electrofishing capture probability varied between 0.020 and 0.310 over the 7 years and between four different large-bodied species (Murray cod (Maccullochella peelii), trout cod (Maccullochella macquariensis), golden perch (Macquaria ambigua ambigua), and silver perch (Bidyanus bidyanus)). River turbidity associated with increased river discharge negatively influenced capture probability. Increasing fish length increased detection of fish up to 500 mm for Murray cod, after which capture probability decreased. Variation in capture probability in large lowland rivers results in additional uncertainty when estimating population size or relative abundance. Research and monitoring programs using fish as an indicator should incorporate strategies to lessen potential error that might result from changes in capture probabilities.

The complete mitochondrial genome of the iconic Australian freshwater fish, the Murray Cod, Maccullochella peelii, was recovered from partial genome sequencing data using the HiSeq platform (Illumina, San Diego, CA). The mitogenome consists of 16,442 bp (58% A + T content) containing 13 protein-coding genes, 2 ribosomal subunit genes, 22 transfer RNAs, and a 768 bp non-coding AT-rich region. This is the first mitogenome sequence for the genus Maccullochella, and the fourth for the family Percichthyidae.

Hypoxia represents a growing threat to biodiversity in freshwater ecosystems. Here, aquatic surface respiration (ASR) and oxygen thresholds required for survival in freshwater and simulated blackwater are evaluated for four lowland river fishes native to the Murray-Darling Basin (MDB), Australia. Juvenile stages of predatory species including golden perch Macquaria ambigua, silver perch Bidyanus bidyanus, Murray cod Maccullochella peelii, and eel-tailed catfish Tandanus tandanus were exposed to experimental conditions of nitrogen-induced hypoxia in freshwater and hypoxic blackwater simulations using dried river red gum Eucalyptus camaldulensis leaf litter. Australia's largest freshwater fish, M. peelii, was the most sensitive to hypoxia but given that we evaluated tolerances of juveniles (0.99±0.04 g; mean mass ±SE), the low tolerance of this species could not be attributed to its large maximum attainable body mass (>100,000 g). Concentrations of dissolved oxygen causing 50% mortality (LC50) in freshwater ranged from 0.25±0.06 mg l−1 in T. tandanus to 1.58±0.01 mg l−1 in M. peelii over 48 h at 25–26°C. Logistic models predicted that first mortalities may start at oxygen concentrations ranging from 2.4 mg l−1 to 3.1 mg l−1 in T. tandanus and M. peelii respectively within blackwater simulations. Aquatic surface respiration preceded mortality and this behaviour is documented here for the first time in juveniles of all four species. Despite the natural occurrence of hypoxia and blackwater events in lowland rivers of the MDB, juvenile stages of these large-bodied predators are vulnerable to mortality induced by low oxygen concentration and water chemistry changes associated with the decomposition of organic material. Given the extent of natural flow regime alteration and climate change predictions of rising temperatures and more severe drought and flooding, acute episodes of hypoxia may represent an underappreciated risk to riverine fish communities.

There are few places in the world where concerns over the decline of freshwater ecosystems and their fishes are more apparent than in the Murray-Darling Basin (MDB), south-eastern Australia. The rivers of the MDB are in poor condition, and fish populations were estimated to be at 10% of pre-European levels (Murray-Darling Basin Commission 2004), with many species considered of conservation concern (Lintermans 2007). Issues regarding fish in the MDB are not new; concerns for popular commercial species such as Murray Cod were first documented over 100 years ago (Dannevig 1903), and by the late 1970s, threats to MDB fishes had been clearly identified (Cadwallader 1978). While early concerns were largely regarding commercial fisheries, the great importance of angling (Henry & Lyle 2003) and the associated socio-economic values and benefits to the recreational fishery of the MDB ($1.35 Billion direct expenditure per annum: Ernst & Young 2011), along with serious conservation concerns, are now paramount. By 2000, there was a growing sense of urgency to rehabilitate fish populations before it was too late, and this culminated in the development of the Native Fish Strategy (NFS) (Murray-Darling Basin Commission 2004), with an emphasis on rehabilitation rather than just sustainable management. Such efforts were needed to protect and restore all fishes, including those key species targeted by recreational fishers. In its first decade (2003–2013), the NFS fundamentally changed fish management in the MDB (Koehn & Lintermans 2012). This included major advances in research and management practices and advocating an overarching and achievable restoration goal to: rehabilitate native fish communities of the Basin back to 60% of their estimated pre-European levels after 50 years of implementation. This was reinforced by engagement of the community and recognition that this would take several decades to deliver. Some key achievements included the following: 1 Development, testing and implementation of one of the world’s largest fish passage programmes from Lake Hume to the Sea.

A tagging and recapture program was carried out between 1959 and 1970 on large freshwater fish species in the Murrumbidgee and Murray Rivers to determine the patterns of their movement. Tagging was carried out at four main sites Stoney Crossing, Hattah, Hay and Narrandera. At the time internal body tags were found to be the most reliable method of tagging. Adequate numbers of Golden Perch, Macquaria ambigua, and low numbers of Murray Cod Maccullochella peelii peelii and Silver Perch Bidyanus bidyanus were recaptured. It is concluded that up - and downstream movement of M. ambigua from these sites varied. The western two sites at Stoney Crossing and Hattah on the Murray River showed a marked net upstream movement; movement from Hay on the Murrumbidgee showed dispersal both up and downstream, while movement from Narrandera showed a net downstream movement. Within the size range sampled 309-563mm, the larger fish moved significantly less than the smaller fish; when split into upstream and downstream movement...

The present radio-tracking study compared adult daytime microhabitat use by three large Australian native freshwater fishes (Murray cod, Maccullochella peelii, trout cod, M. macquariensis, golden perch, Maquaria ambigua) and introduced carp, Cyprinus carpio, in the Murray River, south-eastern Australia. The paper describes habitat patches used by all species and quantifies differences among species. All species were strongly associated with structural woody habitat (>68% cover), deeper (>2.4 m), slower water (<0.2 m s–1) closer to the river bank, with variations in substrate. Murray cod and trout cod used deeper habitats (2.8 m and 2.9 m, respectively), with higher surface water velocities (0.37 m s–1 and 0.49 m s–1, respectively) and further from the bank than the habitats of golden perch (2.6 m; 0.31 m s–1) or carp (2.4 m; 0.20 m s–1), the latter species using wood higher in the water column than did cod species. Trout cod used habitats furthest from the bank and carp those closest. These data provide support and direction for reintroduction of structural woody habitat patches for rehabilitation which, in general, should have >70% cover, be >1.5 m high, located <15% of the river channel (width) closest to the bank, with surface water velocities of 0.3–0.6 m s–1.

We develop a swimming costs model that accounts for the influence of flow velocity and body weight on the net active metabolic rate of Murray cod (Maccullochella peelii). Laboratory trials indicated that swimming costs increased with flow velocity (exponent = 2.36) and declined allometrically with body weight (exponent = −0.27). The newly derived swimming costs model provided a more dynamic estimate of Murray cod energy consumption, which explained 74% of variation in the swimming costs. This new model was compared to traditional bioenergetics models (fixed proportion and optimal swimming speed) to determine swimming costs in a variable temperature (6.4–26.1 °C) and flow velocity (0.06–0.46 m s−1) regime downstream of a large hypolimnetic-releasing impoundment on a major Australian river. Incorporating species-specific swimming cost models, such as the one developed here, into bioenergetics modelling allows the exploration of the impact of flow velocity in lotic systems on the growth responses of freshwater fish.

We have previously identified an unknown cell type in the gills of Murray cod affected with chronic ulcerative dermatopathy (CUD), a condition that causes severe erosion of epidermis surrounding cephalic and lateral line sensory canals. The condition arises in aquaculture facilities that utilize groundwater, with the cause of the condition suggested to be an unknown contaminant(s). Light and transmission electron microscopy were used to characterize and quantify the unknown cells in CUD-affected Murray cod. The cells were identified as rodlet cells and were characterized by their oval or round shape, basally located nucleus, thick fibrillar capsule surrounding the cell, and multiple rodlet sacs containing a central electron-dense core within the cell. Rodlet cells were present in the gills, kidney and intestine of non-CUD-affected and CUD-affected Murray cod; however, differences in the numbers were observed between the groups of fish. A significantly greater number of rodlet cells were observed in the gills and collecting ducts of CUD-affected fish. This is the first report of rodlet cells in Murray cod, and we suggest that the increased rodlet cell numbers in CUD-affected Murray cod may be in response to unknown water contaminant(s) present in the groundwater that give rise to CUD.

The ranavirus, epizootic hematopoietic necrosis virus (EHNV), is endemic to southern Australia with natural outbreaks resulting in mass mortality events in wild Redfin Perch Perca fluviatilis (also known as Eurasian Perch) and less severe disease in farmed Rainbow Trout Oncorhynchus mykiss. To further investigate the host range for EHNV, 12 ecologically or economically important freshwater fish species from southeastern Australia were exposed experimentally to the virus. A bath-challenge model at 18 ± 3°C was employed with limited use of intraperitoneal inoculation to determine if a species was likely to be susceptible to EHNV. Of the species tested, Murray-Darling Rainbowfish Melanotaenia fluviatilis and Dewfish Tandanus tandanus (also known as Freshwater Catfish) were considered to be potentially susceptible species. EHNV was isolated from approximately 7% of surviving Eastern Mosquitofish Gambusia holbrooki, indicating this widespread alien fish species is a potential carrier. The infection of Silver Perch Bidyanus bidyanus and Macquarie Perch Macquaria australasica and the lack of infection in Murray Cod Maccullochella peelii peelii and Golden Perch Macquaria ambigua ambigua after exposure to EHNV via water confirmed earlier data from Langdon (1989). Five other species of native fish were potentially not susceptible to the virus or the fish were able to recover during the standard 35-d postchallenge observation period. Overall, it appeared that EHNV was less virulent in the present experimental model than in previous studies, but the reasons for this were not identified. Received May 21, 2012; accepted November 1, 2012.

Conservation of Murray cod (Maccullochella peelii), a large endangered fish species of Australia’s Murray–Darling Basin, relies on a detailed understanding of life history, including movement patterns and habitat use. We used radio-tracking to investigate the movement of 36 Murray cod in main channel and anabranch habitats of the lower River Murray during a flood and associated hypoxic blackwater event. During a flood peak of ~93 000 ML day–1, dissolved oxygen decreased to 1.2 mg L–1. Four movement types were observed: (1) localised small-scale movement, (2) broad-scale movement within anabranch habitats, (3) movement between anabranch and main channel habitats, and (4) large-scale riverine movement. Murray cod exhibited high fidelity to anabranch habitats but also moved extensively between anabranches and the main channel. Fish were consistently located in the main channel or permanent anabranches, suggesting that use of ephemeral floodplain habitats is limited, and highlighting the importance of connectivity between off-channel and main channel habitats. Mortality of radio-tagged fish was considerable (25%) in association with low dissolved oxygen concentrations, indicating that hypoxic blackwater may have had a substantial impact on Murray cod populations in the lower River Murray.

Recovery of threatened species is often necessarily a long-term process. The present paper details the progress towards the recovery of trout cod, Maccullochella macquariensis, an iconic, long-lived fish species first listed as threatened in the 1980s. The objectives, actions and progress over three successive national recovery plans (spanning 18 years) are assessed, documenting changes to population distribution and abundance and updating ecological knowledge. Increased knowledge (especially breeding biology and hatchery techniques, movements, habitats and genetics) has greatly influenced recovery actions and the use of a population model was developed to assist with management options and stocking regimes. Key recovery actions include stocking of hatchery-produced fish to establish new populations, regulations on angling (including closures), education (particularly identification from the closely related Murray cod, M. peelii) and habitat rehabilitation (especially re-instatement of structural woody habitats). In particular, the establishment of new populations using hatchery stocking has been a successful action. The importance of a coordinated long-term approach is emphasised and, although there is uncertainty in ongoing resourcing of the recovery program, much has been achieved and there is cautious optimism for the future of this species.

The influence of saline concentration on the success of Calcein marking techniques for hatchery-produced Murray cod (Maccullochella peelii)

Abstract We analysed otoliths from excavations along the Lower Murray River (n=24), dating from the mid‐ to late‐Holocene period. We identified the species, and estimated the size and age of fish. The potential habitat that fish used throughout their life was estimated from chemical information in the otoliths. The majority of the fish (identified as Maccullochella peelii n=22 and Macquaria ambigua n=2) were caught in freshwater environments during the warm season, and had grown to an age and size indicative of sexual maturity. These observations accord with Ngarrindjeri oral tradition concerning sustainable management strategies. Data indicate that M. peelii grew to a significantly larger size than present fish; historical data suggests this size reduction may be the result of European fishing practices, introduced species and habitat degradation. The study demonstrates the unique nature of otoliths and their potential for investigating Indigenous subsistence strategies.

Abstract This study documented the swimming capacity of a large ambush predator, Murray cod Maccullochella peelii, endemic to the Murray‐Darling Basin, Australia. It was evident that the species is a swimming generalist, maintaining moderate ability across all aspects of the swimming capacity parameters that were investigated. For instance, the species was capable of prolonged swimming performance (critical swimming speed, Ucrit: absolute, 0.26–0.60 m·s−1, relative, 1.15–2.20 BL s−1) that was inferior to active fish species, but comparable with other ambush predators. The species had low energetic demands, maintaining a low mass‐specific standard (21.3–140.3 mg·h−1 kg−1) and maximum active metabolic rate (75.5–563.8 mg·h−1 kg−1), which lead to a small scope for activity (maximum active metabolic rate–standard metabolic rate; 1.4–5.9). They were reasonably efficient swimmers (absolute and relative optimal swimming speed, 0.17–0.61 m·s−1 and 0.77–1.93 BL·s−1, respectively) and capable of repeat bouts of prolonged performance (recovery ratio = 0.99). Allometric changes in aspects of swimming capacity were realised with body mass, whereas broad swimming capacity was maintained across a wide range of temperatures. The swimming capacity demonstrated by M. peelii reflects a sit‐and‐wait foraging strategy that seeks to conserve energy characteristic of ambush predators, but with distinct features (e.g., lack of fast‐start ability) that may reflect their evolution in some of the world's most hydrologically and thermally variable rivers.

Abstract Murray cod Maccullochella peelii (Mitchell) is a large, iconic Australian fish species targeted by anglers but also listed as nationally threatened. A consultative process that included conservation and fishery interests helped to develop a population model for this species and agree on management scenarios to be tested. The modelled scenarios illustrated that threats to populations (risk of decline) can be substantially reduced and catch rates increased through harvest slot length limits (HSLL) rather than minimum legal limits (MLL). A 600‐ to 1000‐mm HSLL provided lower risk of decline and greater catch rates than the existing 500‐mm MLL, but better results were achieved with a 400‐ to 600‐mm HSLL. Importantly, a range of other impacts (fish kills, stocking, thermal impacts, larval mortalities, habitat changes) were recognised and incorporated. This study provides an example of the utility of a population model to improve management decision‐making for both conservation and fishery objectives.

Epizootic ulcerative syndrome (EUS) is a fish disease of international significance and reportable to the Office International des Epizootics. In June 2010, bony herring Nematalosa erebi, golden perch Macquaria ambigua, Murray cod Maccullochella peelii and spangled perch Leiopotherapon unicolor with severe ulcers were sampled from the Murray-Darling River System (MDRS) between Bourke and Brewarrina, New South Wales Australia. Histopathology and polymerase chain reaction identified the fungus-like oomycete Aphanomyces invadans, the causative agent of EUS. Apart from one previous record in N. erebi, EUS has been recorded in the wild only from coastal drainages in Australia. This study is the first published account of A. invadans in the wild fish populations of the MDRS, and is the first confirmed record of EUS in M. ambigua, M. peelii and L. unicolor. Ulcerated carp Cyprinus carpio collected at the time of the same epizootic were not found to be infected by EUS, supporting previous accounts of resistance against the disease by this species. The lack of previous clinical evidence, the large number of new hosts (n = 3), the geographic extent (200 km) of this epizootic, the severity of ulceration and apparent high pathogenicity suggest a relatively recent invasion by A. invadans. The epizootic and associated environmental factors are documented and discussed within the context of possible vectors for its entry into the MDRS and recommendations regarding continued surveillance, research and biosecurity are made.

Juvenile Murray cod Maccullochella peelii exhibited a type II functional response while preying on blackworms Lumbriculus variegatus, and the parameters of the type II model did not differ significantly between clear (0 NTU) and turbid (150 NTU) treatments. Further experiments showed that vision may not be necessary for prey detection and capture by juvenile M. peelii; consumption of inanimate prey was not significantly different between light and dark (<1 × 10(-4) µE m(-2) s(-1)) trials. These results imply that the sensory physiology of M. peelii is well adapted to a turbid visual environment. In addition, habitat complexity increased the food consumption rate of juvenile M. peelii, perhaps by relaxing innate predator avoidance behaviours that depress foraging in more open environments.

The New South Wales South Western Slopes bioregion has been significantly altered by agricultural development and is likely to experience additional significant impacts as a result of anthropogenic climate change. A simple inventory survey of the vertebrate fauna of Currawananna State Forest, a small woodland remnant on the Murrumbidgee River in the south of the bioregion, over the period 2002-2010 identified 172 vertebrate fauna species. This included three species of national conservation concern (the Trout Cod Maccullochella macquariensis, Murray Cod Maccullochella peelii and Superb Parrot Polytelis swainsonii) and another 16 species (5 fishes, 8 birds and 3 mammals) of state-level concern, as well as diverse frog, reptile, woodland and wetland bird and microchiropteran bat assemblages. This study demonstrates that even small remnants play an important role in supporting biodiversity in agricultural landscapes.

In this study, we report ghrelin and leptin immunoreactive (ir) cells distribution in the gastrointestinal tract and blood ghrelin and leptin levels in rainbow trout (Oncorhynchus mykiss) and Murray cod (Maccullochella peelii peelii) fed diets with different fatty acid compositions. Juvenile rainbow trout and Murray cod were fed five iso-energetic experimental diets containing fish oil (FO) or one of the following vegetable oils (VO): olive oil (OO), sunflower oil (SO), linseed oil (LO), and palm oil (PO); as the added dietary lipid source. The presence and distribution of both ghrelin and leptin ir cells in the gastrointestinal tract were affected by the inclusion of VO. Ghrelin ir cells were found in the gastric glands of rainbow trout and in the mioenteric plexuses of the stomach of Murray cod fed FO. Ghrelin ir cells were localized in the mucosa of the intestine of rainbow trout and Murray cod fed VO. Leptin ir cells were more abundant in the epithelial lining of the mucosa folds and in the glands of the stomach of rainbow trout fed VO. Leptin immunoreactivity was detected in the gastric mioenteric plexus of Murray cod fed FO. No differences were found both in ghrelin and leptin levels in blood plasma or in the growth rates of rainbow trout and Murray cod fed the different experimental diets. These observations suggest that dietary fatty acids play a role in the peripheral feeding regulation.