Molecular Shuttle Research Articles

On the supramolecular interactions into a pH- and Metal-Actuated Molecular Shuttle: some insights from QTAIM modeling.

Supramolecular contacts responsible for chemical interaction of cucurbit[7]uril (CB[7]) macrocycle on a Tolyl-Viologen-Phenylene-Imidazole (T-VPI) molecular thread, at acid pH (T-VPI-H+) or after Ag+ cation addition (T-VPI-Ag+), are analytically addressed in a computational framework combining Quantum Theory of Atoms in Molecules (QTAIM) with Density Functional Theory (DFT). In this respect, the crystallographic structure (CCDC number 2217466) is taken as reference condition for addressing the nature of the chemical interactions driving the shuttling of the CB[7] between T and P stations recently observed in dilute water solutions. Beside the host(CB[7]) vs guest(T-VPI-H+ or T-VPI-Ag+) complexation, the coordination sphere of the Ag+ cation is also investigated by means of local electronic energy density - H(r) - descriptors. The derived non-covalent interaction patterns are found to support diagnostic 1H NMR signals used for detecting the mutual position of the CB[7] along the axle. This work highlights the potentialities of a QTAIM based approach in the characterization of supramolecular and metal-complexation effects in molecular aggregates such as not-interlocked synthetic molecular shuttles.

The Diversity of Cucurbituril Molecular Switches and Shuttles.

Ring translocation switches and shuttles featuring a macrocycle (or a ring molecule) navigating between two or more stations continue to attract attention. While the vast majority of these systems are developed in organic solvents, the cucurbituril (CB) macrocycles are ideally suited to prepare such systems in water. Indeed, their stability and their relatively high affinity for relevant guest molecules are key attributes toward translating the progresses made in organic solvents, into water. In this concept article, we summarize the findings, key advances and multiple possibilities offered by CBs toward advanced molecular switches and shuttles in water.

A pH- and Metal-Actuated Molecular Shuttle in Water.

The structure of the Viologen-Phenylene-Imidazole (VPI) guest, previously shown to be bound by cucurbit[7]uril (CB[7]) with binding modes depending on pH and silver ions, has been extended by adding hydrophobic groups on the two extremities of VPI before investigations of CB[7] binding by NMR, ITC, X-ray diffraction, UV-vis and fluorescence spectroscopies. With an imidazole station extended by a naphthalene group (VPI-N), binding modes of CB[7] are similar to those previously observed. However, with the viologen extended by a tolyl group (T-VPI), CB[7] preferentially sits on station T, shuttling between the T and P stations at acid pH or after Ag+ addition. The CB[7] ⋅ T-VPI complex thus behaves as a metal-actuated thermodynamic stop-and-go molecular shuttle featured by fast and autonomous ring translocation between two stations and a continuum for fractional station occupancy solely and easily controlled by Ag+ concentration.

Dynamic Metalloporphyrin-Based [2]Rotaxane Molecular Shuttles Stimulated by Neutral Lewis Base and Anion Coordination.

A series of dynamic metalloporphyrin [2]rotaxane molecular shuttles comprising of bis-functionalised Zn(II) porphyrin axle and pyridyl functionalised macrocycle components are prepared in high yield via active metal template synthetic methodology. Extensive variable temperature 1 H NMR and quantitative UV-Vis spectroscopic titration studies demonstrate dynamic macrocycle translocation is governed by an inter-component co-ordination interaction between the macrocycle pyridyl and axle Zn(II) metalloporphyrin, which serves to bias a 'resting state' co-conformation. The dynamic shuttling behaviour of the interlocked structures is dramatically inhibited by the addition of a neutral Lewis base such as pyridine, but can also be tuned via post-synthetic rotaxane demetallation of the porphyrin axle core to give free-base, or upon subsequent metallation, Ni(II) [2]rotaxane analogues. Importantly, the Lewis acidic Zn(II) porphyrin axle component is also capable of coordinating anions which induces mechanical bond shuttling behaviour resulting in a novel optical sensing response.

Controlling molecular shuttling in a rotaxane with weak ring recognition sites.

We describe a rotaxane molecular shuttle encompassing triazolium and tertiary ammonium units as weak recognition sites for the ring. Such a design, which differs from that of typical controllable rotaxanes, allows the precise tuning of the ring distribution among the two sites - i.e., the coconformational equilibrium - by changing the solvent polarity or the nature of the counteranions. Shuttling of the ring between the two stations can also be toggled by acid-base stimuli. Such an approach is paradigmatic to obtain rotaxanes that can sense environmental changes and transduce them into a coconformational response and opens avenues for novel applications in sensing and stimuli-responsive materials.

Non‐Equilibrium Kinetic States of a [2]Rotaxane‐Based Molecular Shuttle Controlled by Acid Concentrations

AbstractA [2]rotaxane‐based molecular shuttle with an acid‐responsive asymmetric macrocycle on a symmetric dumbbell axle is reported. Upon adding TFA, the macrocycle, namely the amine naphthotube, is protonated and translocates from the di(quaternary ammonium) station to the triazole stations because of electrostatic repulsion and weakened binding. The shuttling kinetics are slow due to the steric hindrance caused by the ethyl group on the quaternary ammonium center and can be followed by 1H NMR spectroscopy. Interestingly, it was found that the shuttling kinetics depends on the concentration of TFA. A kinetic intermediate was detected and can even be captured in the presence of a high concentration of TFA. Extensive control experiments revealed that the shuttling kinetics and the capture of the kinetic intermediate are related to the different protonation states of the rotaxanes.

Non-Equilibrium Kinetic States of a [2]Rotaxane-Based Molecular Shuttle Controlled by Acid Concentrations.

A [2]rotaxane-based molecular shuttle with an acid-responsive asymmetric macrocycle on a symmetric dumbbell axle is reported. Upon adding TFA, the macrocycle, namely the amine naphthotube, is protonated and translocates from the di(quaternary ammonium) station to the triazole stations because of electrostatic repulsion and weakened binding. The shuttling kinetics are slow due to the steric hindrance caused by the ethyl group on the quaternary ammonium center and can be followed by 1 H NMR spectroscopy. Interestingly, it was found that the shuttling kinetics depends on the concentration of TFA. A kinetic intermediate was detected and can even be captured in the presence of a high concentration of TFA. Extensive control experiments revealed that the shuttling kinetics and the capture of the kinetic intermediate are related to the different protonation states of the rotaxanes.

Photoinduced Autonomous Nonequilibrium Operation of a Molecular Shuttle by Combined Isomerization and Proton Transfer Through a Catalytic Pathway.

We describe a [2]rotaxane whose recognition sites for the ring are a dibenzylammonium moiety, endowed with acidic and H-bonding donor properties, and an imidazolium center bearing a photoactive phenylazo substituent. Light irradiation of this compound triggers a network of E/Z isomerization and proton transfer reactions that enable autonomous and reversible ring shuttling away from equilibrium.

Interfacial Manganese-Doping in CsPbBr3 Nanoplatelets by Employing a Molecular Shuttle.

Mn‐doping in cesium lead halide perovskite nanoplatelets (NPls) is of particular importance where strong quantum confinement plays a significant role towards the exciton–dopant coupling. In this work, we report an immiscible bi‐phasic strategy for post‐synthetic Mn‐doping of CsPbX3 (X=Br, Cl) NPls. A systematic study shows that electron‐donating oleylamine acts as a shuttle ligand to transport MnX2 through the water–hexane interface and deliver it to the NPls. The halide anion also plays an essential role in maintaining an appropriate radius of Mn2+ and thus fulfilling the octahedral factor required for the formation of perovskite crystals. By varying the thickness of parent NPls, we can tune the dopant incorporation and, consequently, the exciton‐to‐dopant energy transfer process in doped NPls. Time‐resolved optical measurements offer a detailed insight into the exciton‐to‐dopant energy transfer process. This new approach for post‐synthetic cation doping paves a way towards exploring the cation exchange process in several other halide perovskites at the polar–nonpolar interface.

Cover Feature: Weinreb Amide, Ketone and Amine as Potential and Competitive Secondary Molecular Stations for Dibenzo‐[24]Crown‐8 in [2]Rotaxane Molecular Shuttles (Chem. Eur. J. 70/2021)

A chemical way to bistable molecular shuttles that hold a combination of amine, Weinreb amide and/or ketone as secondary stations for dibenzo-[24]crown-8 (DB24C8) is reported. Ketone and amine moieties have similar affinity for DB24C8 that is better than the Weinreb amide has. Hydrogen bonds between DB24C8 and an unhindered axle usually favor a co-conformation; unless steric restrictions, hence the constrained co-conformation, impose a predominance of alternative and unexpected even weaker H-bonds. More information can be found in the Research Article by M. Gauthier and F. Coutrot (DOI: 10.1002/chem.202103805).

Weinreb Amide, Ketone and Amine as Potential and Competitive Secondary Molecular Stations for Dibenzo-[24]Crown-8 in [2]Rotaxane Molecular Shuttles.

This paper reports the synthesis and study of new pH-sensitive DB24C8-based [2]rotaxane molecular shuttles that contain within their axle four potential sites of interaction for the DB24C8: ammonium, amine, Weinreb amide, and ketone. In the protonated state, the DB24C8 lay around the best ammonium site. After either deprotonation or deprotonation-then-carbamoylation of the ammonium, different localizations of the DB24C8 were seen, depending on both the number and nature of the secondary stations and steric restriction. Unexpectedly, the results indicated that the Weinreb amide was not a proper secondary molecular station for the DB24C8. Nevertheless, through its methoxy side chain, it slowed down the shuttling of the macrocycle along the threaded axle, thereby partitioning the [2]rotaxane into two translational isomers on the NMR timescale. The ketone was successfully used as a secondary molecular station, and its weak affinity for the DB24C8 was similar to that of a secondary amine.

Mechanism of Ion Transport Across Membranes Assisted by Molecular Shuttles

Mechanism of Ion Transport Across Membranes Assisted by Molecular Shuttles

Radical Cyclic [3]Daisy Chains

Summary Mechanically interlocked molecules (MIMs) that undergo controllable internal motions of their component parts in more than one dimension are rare entities in the molecular world. Cyclic [2]daisy chains ([c2]DCs) are a class of MIMs that have been identified as prototypes for molecular muscles. It remains, however, a challenge to synthesize [cn]DCs with n > 2 selectively and efficiently. Herein, we report the design and synthesis of [c3]DCs employing radical and anionic templates. Two mechanically interlocked [c3]DCs with 18 positive charges were obtained in >90% yields. One [c3]DC displayed good air stability in its radical cationic form, while the other underwent reversible “co-conformational” switching between open macrocyclic and closed trisarm-shaped forms under electrochemical control. These findings provide not only two-dimensional MIMs with attractive electronic and switchable properties, but also a starting point for the design of extended molecular arrays, which could become the forerunners of adjustable molecular nets and breathable molecular membranes.

Statistical Mechanical Model of Gas Adsorption in a Metal-Organic Framework Harboring a Rotaxane Molecular Shuttle.

Metal-organic frameworks (MOFs) are modular and tunable nanoporous materials with applications in gas storage, separations, and sensing. Integrating flexible/dynamic, gas-responsive components into MOFs can give them unique or enhanced adsorption properties. Here, we explore the adsorption properties that could be imparted to a MOF by a rotaxane molecular shuttle (RMS) in its pores. In the unit cell of an RMS-MOF, a macrocyclic wheel is mechanically interlocked with a strut of the MOF scaffold. The wheel shuttles between stations on the strut that are also gas adsorption sites. At a level of abstraction similar to the seminal Langmuir adsorption model, we pose and analyze a simple statistical mechanical model of gas adsorption in an RMS-MOF that accounts for (i) wheel/gas competition for sites on the strut and (ii) gas-induced changes in the configurational entropy of the shuttling wheel. We determine how the amount of gas adsorbed, the position of the wheel, and the differential energy of adsorption depend on temperature, pressure, and the interactions of the gas and wheel with the stations on the strut. Our model reveals that, compared to a rigid, Langmuir material, the chemistry of the RMS-MOF can be tuned to render gas adsorption more or less temperature sensitive and to release more or less heat upon adsorption. The model also uncovers that, if gas-wheel competition for a station is fierce, temperature influences the position of the wheel differently depending on the amount of gas adsorbed.

Programmable Thermoresponsive Micelle-Inspired Polymer Ionic Liquids as Molecular Shuttles for Anionic Payloads

To enable the programmable thermoresponsive transport of anions between two phases, multifunctional hyperbranched polymer ionic liquids (hyperPILs) exhibiting micelle-inspired architectures are tai...

A Redox-Switchable Molecular Zipper.

The design and synthesis of artificial molecular switches (AMSs) displaying architectures of increased complexity would constitute significant progress in meeting the challenging task of realizing artificial molecular machines (AMMs). Here, we report the synthesis and characterization of a molecular shuttle composed of a cyclobis(paraquat-4,4'-biphenylene) cyclophane ring and a dumbbell incorporating a cyclobis(paraquat-m-phenylene) cyclophane "head" and a bifurcated, tawse-like "tail" composed of two oligoether chains, each containing a 1,5-dioxynaphthalene ring. In its reduced state the ring-in-ring recognition motif, between the meta and para bisradical dicationic cyclophanes (rings), defines the [2]rotaxane, whereas in the oxidized state, the cyclobis(paraquat-4,4'-biphenylene) cyclophane encircles the two 1,5-dioxynaphthalene rings in the bifurcated "tail". The redox-controlled molecular shuttling, which can be likened to the action of a zipper in the macroscopic world, exhibits slow kinetics dampened by the opening and closing of the bifurcated "tail" of the molecular shuttle. Cyclic voltammetry reveals that this slow shuttling is associated with electrochemical hysteresis.

Biomimetic Synchronized Motion of Two Interacting Macrocycles in [3]Rotaxane‐Based Molecular Shuttles

AbstractNoncovalent interactions between all the neighboring components in biomolecular machines are responsible for their synchronized motion and thus complex functions. This strategy has rarely been used in multicomponent molecular machines. Here, we report four [3]rotaxane‐based molecular shuttles. Noncovalent interactions among the three components (two interacting macrocycles and one axle) not only cause a “systems‐level” effect on the relative positions of the two macrocycles along the axle, but also result in a synchronized motion of the two macrocycles when adding partial amount of stimuli. Moreover, the intermediate state with one shuttled macrocycle even exist predominantly in the solution during the titration of stimuli, which is theoretically unexpected for the [3]rotaxane with two non‐interacting rings. This biomimetic strategy may provide a method for constructing highly complex molecular machines.

Biomimetic Synchronized Motion of Two Interacting Macrocycles in [3]Rotaxane-Based Molecular Shuttles.

Noncovalent interactions between all the neighboring components in biomolecular machines are responsible for their synchronized motion and thus complex functions. This strategy has rarely been used in multicomponent molecular machines. Here, we report four [3]rotaxane-based molecular shuttles. Noncovalent interactions among the three components (two interacting macrocycles and one axle) not only cause a "systems-level" effect on the relative positions of the two macrocycles along the axle, but also result in a synchronized motion of the two macrocycles when adding partial amount of stimuli. Moreover, the intermediate state with one shuttled macrocycle even exist predominantly in the solution during the titration of stimuli, which is theoretically unexpected for the [3]rotaxane with two non-interacting rings. This biomimetic strategy may provide a method for constructing highly complex molecular machines.

Chemical On/Off Switching of Mechanically Planar Chirality and Chiral Anion Recognition in a [2]Rotaxane Molecular Shuttle.

We exploit a reversible acid–base triggered molecular shuttling process to switch an appropriately designed rotaxane between prochiral and mechanically planar chiral forms. The mechanically planar enantiomers and their interconversion, arising from ring shuttling, have been characterized by NMR spectroscopy. We also show that the supramolecular interaction of the positively charged rotaxane with optically active anions causes an imbalance in the population of the two enantiomeric coconformations. This result represents an unprecedented example of chiral molecular recognition and can disclose innovative approaches to enantioselective sensing and catalysis.

Pillar[5]arene Based Pseudo[1]rotaxane Operating as Acid/Base‐Controllable Two State Molecular Shuttle

A ethylene glycol bridged pyridine and pillar[5]arene based mechanically selflocked pseudo[1]rotaxane was constructed successfully. The structure and selflocked conformation of pseudo[1]rotaxane were confirmed by 1H, 2D NMR spectrum and HR‐ESI‐MS. It was found that in dilute solution the pseudo[1]rotaxane could be operated as an acid/base‐controllable two state molecular shuttle while In concentrated solution, the pseudo[1]rotaxane existed as a dimer and could be operated from shrinking state to extension state.