Understanding how species share resources (niche dynamics) and associate with each other is crucial for maintaining stable ecological communities. Using infrared camera traps, we constructed spatial association networks for an isolated Asian elephant population. The Asian elephant (Elephas maximus), a keystone species in tropical forests, faces significant threats from habitat fragmentation and human disturbances, particularly in the isolated population of Nangunhe National Nature Reserve, Yunnan, China. Using infrared camera trapping, niche analysis, and interspecific association models, we examined the ecological role of Asian elephants and their sympatric species networks in fragmented habitats. We identified 44 species, including 11 species with higher relative abundance showing significant ecological correlations with elephants. Asian elephants exhibited the broadest spatial distribution, consistent with their role as ecological engineers due to high environmental tolerance and diverse resource utilization. Sympatric herbivores exhibited moderate spatial co-occurrence. Wild boars (Sus scrofa), red-bellied squirrels (Callosciurus erythraeus), northern pig-tailed macaques (Macaca leonina), and red junglefowl (Gallus gallus) demonstrated significant spatial associations with elephants. Lambda coefficient analysis revealed asymmetric associations reflecting spatial reliance of red-bellied squirrels and wild boars on elephant activity zones. Temporally, Asian elephants exhibited a stable bimodal activity pattern at dawn and dusk. Despite varying degrees of diel overlap with sympatric species, no significant temporal avoidance was detected, suggesting fine-scale coexistence mechanisms beyond the temporal dimension. We argue that conservation strategies are in urgent need of a transformation from single-species protection to the preservation of ecological interaction networks. This study clarifies the dominant position of Asian elephants in the community by mapping the spatial association networks between Asian elephants and sympatric species, and its findings hold substantial guiding significance for the recovery and protection of isolated Asian elephant populations.

ABSTRACTBackground and Aim:Zoonotic malaria poses an emerging challenge in Southeast Asia, where rapid urbanization and deforestation increase human–wildlife interactions. Macaques are important natural reservoirs for Plasmodium species due to their evolutionary proximity to humans. Understanding host-specific immune responses to malaria in free-living macaques may aid biomarker discovery and guide surveillance strategies. This study aimed to characterize serum proteomic profiles in three wild macaque species, Macaca fascicularis (Mf), Macaca leonina (Ml), and Macaca arctoides (Ma), naturally infected with zoonotic Plasmodium spp., and to identify conserved proteins with biomarker potential.Materials and Methods:Blood samples from 61 macaques (25 Ml, 32 Ma, 4 Mf) were screened for Plasmodium species using nested polymerase chain reaction (PCR). Serum proteomes were analyzed using liquid chromatography-tandem mass spectrometry, followed by bioinformatics-based differential protein expression analysis, pathway enrichment, gene ontology classification, and construction of protein–protein interaction (PPI) networks. Comparative analyses were performed across species to identify conserved expression signatures.Results:Nested PCR confirmed Plasmodium infections in 20.00% of Ml, 50.00% of Ma (34.78% zoonotic), and 100% of Mf samples. Proteomic profiling identified 9,525 serum proteins, of which 698 were differentially expressed across species. Thirty-six proteins formed robust PPI subnetworks linked to immune defense, apoptosis, DNA repair, calcium signaling, and cytoskeletal remodeling. Ml exhibited predominant protein upregulation, whereas Mf and Ma showed downregulation trends, indicating species-specific immune adaptations. Notably, six of nine previously reported malaria-associated proteins (including CARD domain-containing protein, interleukin 1 receptor-associated kinase 1, and non-specific serine/threonine protein kinase) were consistently expressed across all species, supporting their potential as conserved biomarkers.Conclusion:Free-living macaques demonstrate distinct proteomic responses to Plasmodium infection, with Ml mounting a stronger immune response relative to Ma and Mf. The identification of conserved immune-related proteins highlights their translational potential as biomarkers for zoonotic malaria in humans. These findings advance the understanding of host–parasite interactions in natural macaque populations and provide a foundation for selecting optimal primate models, improving surveillance, and developing targeted interventions against zoonotic malaria.

A total of five captive northern pig-tailed macaques (Macaca leonina) were observed from October 2022 to May 2023 using a structured ethogram to understand their behavioural patterns at Chittagong Zoo, Bangladesh. We detected nine activity patterns along with some abnormal behaviours using scan sampling methods with 5-minutes intervals. Diurnal and seasonal fluctuations in the behaviours were explicitly noticed. Locomotion was the highest (46.11%) time-consuming behaviour, followed by resting and grooming while bathing was the activity on which the macaques spent the lowest time (0.60%). M. leonina was mostly (29.44%) active during 09:00-11:00 h and engaged in less (18.41%) activity in the afternoon (03:00-05:00 h), which may be due to the captive environment. Seasonal patterns showed increased activity (25.59%) in late autumn and decreased activity (24.26%) in summer. These activities did not differ significantly within the pre-determined period (t = 1.95; P > 0.05). The macaques were found to be depressed for more time (24.36%) compared to other atypical activities such as debris eating, stereotypic pacing, begging, cage bar biting, etc. Time spent on these behaviors varied significantly during the study period (t = 3.62, P < 0.05). The unusual group structure, lack of captivity enrichment, and presence of the visitors – were assumed as the influences behind these abnormalities. Finally, we compared behavioural activities of captive M. leonina with activity patterns of wild groups published in the literature. Bangladesh J. Zool. 52(3): 323-336, 2024

Globally, the effective protected area network is one of the last resorts for conserving biodiversity. The nature of protected areas depends on the land ownership of the respective countries including India. The landholding in the northeastern states of India remains with native people, thus, 'Community Reserve' (CR) was introduced in 2003. Considering the high number of CR in Meghalaya that are home to many threatened primates, understanding their role in conserving the primates was crucial. We conducted day and night trail surveys in 32 CR of Meghalaya, and a questionnaire survey of local people for their perception of primates. We sampled basal area, tree density, canopy cover, canopy height, bamboo density, and human activity in each CR to test their influence on the occupancy of primates. We recorded the Western hoolock gibbon Hoolock hoolock, capped langur Trachypithecus pileatus, Northern pig-tailed macaque Macaca leonina, Assamese macaque Macaca assamensis, Rhesus macaque Macaca mulatta, and Bengal slow loris Nycticebus bengalensis. The primate richness and abundance were higher in the CR of Garo Hills than in the Khasi and Jaintia Hills. The gibbons had the highest patch occupancy, which was followed by capped langur, Assamese macaque, and pig-tailed macaque. Large-sized CR determined the occupancy of gibbons and Assamese macaques. Canopy cover positively influenced the occupancy of three primates except the Assamese macaque, whereas the canopy height had a positive association with three species of primates. The basal area, and tree density, negatively affected the occurrence of Assamese macaque, northern pig-tailed macaque, and capped langur. Macaques were the most hunted primates. The differential occurrence and abundance in different hill systems may be due to hunting and habitat size rather than habitat quality. Habitat restoration would improve the habitat quality with the involvement of communities to assist in retaining and avoiding the local extinction of primates.

The Chattogram Hill Tracts (CHTs) in Bangladesh have a rich biodiversity, hosting a wide range of wild mammal species, underscoring the importance of systematic monitoring focused on conservation efforts. This study aims to assess the diversity and abundance of small- and medium-sized wild mammal species in Pittachhara Forest in the CHTs. A comprehensive wildlife monitoring survey was conducted in this forest using strategically placed camera traps to identify the wild species diversity, and we evaluated the activity patterns and seasonal variations for the period of February 2023 to August 2024. The camera trap identified eight species of small- and medium-sized wild mammals: the Bengal slow loris, northern pig-tailed macaque, leopard cat, large Indian civet, common palm civet, crab-eating mongoose, northern tree shrew, and black rat. The activity patterns showed distinct temporal behaviors among these wild mammals, with nocturnal activity dominating for the Bengal slow loris and leopard cat, while the northern pig-tailed macaque exhibited diurnal activity. Seasonal variations demonstrated a significant difference in increased activity among most wild mammal species throughout the summer, particularly the large Indian civet and crab-eating mongoose, likely due to favorable environmental conditions, and decreased activity in the winter (p < 0.05). The findings suggest an intricate connection between species-specific behaviors and environmental factors that influence activity patterns, with increased activity in summer and a decrease in winter, indicating that summer conditions may enhance the movement and foraging behaviors of mammals. This study underscores the necessity for continuous biodiversity monitoring followed by conservation efforts in Pittachhara Forest to reduce the threats of habitat fragmentation, human disturbances, and inadequate protection, thus protecting the survival of endangered wild mammal species and maintaining the environmental harmony of this small, protected area.

Type I interferon (IFN-I) and its downstream genes play a profound role in HIV infection. In this study, we found that an IFN-inducible gene, IFI27, was upregulated in HIV-1 infection, which in turn efficiently suppressed HIV-1 replication, specially degraded the viral gag protein, including p24 and p55 subunits. Notably, the anti-HIV-1 activity of IFI27 in Old World monkeys surpassed that in New World monkeys, and IFI27 has a higher potentially inhibitory effect on HIV-1 than simian immunodeficiency virus (SIV). Our initial observations showed that NPM-IFI27, the IFI27 variant in northern pig-tailed macaque (Macaca leonina, NPM), exhibited a strong anti-HIV-1 activity. Further investigation demonstrated that NPM-IFI27 degraded p24 and p55 via the ubiquitin-proteasome pathway, with NPM-IFI27-37-115 interacting with the p24-N domain, and the NPM-IFI27-76-122 domain was closely associated with K48 ubiquitin recruitment. Additionally, Skp2 was identified as the probable E3 ubiquitin ligase responsible for the degradation of p24 and p55. Similarly, human IFI27 (Hu-IFI27) showed a mechanism similar to NPM-IFI27 in HIV-1 inhibition. These findings underscore the pivotal role of NPM-IFI27 in HIV-1 infection and provide a potential strategy for clinical anti-HIV-1 therapy.IMPORTANCEHIV-1 infection can trigger the production of IFN-I, which subsequently activates the expression of various IFN-stimulated genes (ISGs) to antagonize the virus. Therefore, discovering novel host antiviral agents for HIV-1 treatment is crucial. Our previous study revealed that IFI27 can influence HIV-1 replication. In this study, we observed that the NPM-IFI27 complex specifically inhibited HIV-1 by targeting its Gag protein. Further exploration demonstrated that IFI27 interacted with the HIV-1 p24 and p55 proteins, leading to their degradation through the ubiquitin-proteasome pathway. Notably, the NPM-IFI27-37-122 variant exhibited potent anti-HIV-1 activity, comparable to that of SAMHD1. These findings highlight the critical role and inhibitory mechanism of NPM-IFI27 in HIV-1 infection, providing a potential strategy for clinical antiviral therapy.

Abstract Nest predation is typically the main cause of nest failure in forest understory birds; thus, identification of primary nest predators is key to understanding nest predation patterns. Furthermore, the responses of predators are likely affected by vegetation structure, but predator responses to micro-scale habitat characteristics are largely unknown, especially in tropical forests. We used a long-term study with one of the largest datasets of its kind to investigate the extent to which micro-habitat structure (5-m radius surrounding a nest) can predict the likelihood of predation and by which predator. In a secondary evergreen forest in northeastern Thailand, 2013–2021, we found 1,016 active nests of 13 species and 24-hour video-monitored 500 of them. We recorded 336 predation events from 16 nest predator species. From this and previous studies at our site, we identified the top 4 predator species/species groups accounting for ~83% of predation events: Macaca leonina (northern pig-tailed macaque, 36% of predation events), cat snakes (Boiga cyanea [green cat snake] and B. siamensis [gray cat snake]; 20%), Lycodon cf. davisonii (Blandford’s bridle snake, 18%), and accipiters (Accipiter trivirgatus [Crested Goshawk] and A. badius [Shikra]; 9%). These 4 predator species differed in their responses to vegetation structure likely reflecting differences in foraging behaviors. Macaque and accipiters, both diurnal and visually oriented, tended to depredate more visible/open nests, but macaque depredated nests surrounded by more trees and short woody stems (&amp;lt;3 m tall) compared to raptors. For snakes, both nocturnal, cat snakes depredated nests with higher numbers of both short woody stems and woody climbers, whereas bridle snake depredated nests with more trees and fewer climbers. As noted previously, nest predator identity is critical to understanding habitat-predation patterns. Our data suggest that nest site vegetation characteristics influence the likelihood of a given species of predator locating a nest and that even small changes in vegetation structure could significantly alter predation patterns.

Tropical rainforest supports an incredible diversity of mammalian species. The forest patches of northeast Bangladesh are considered hotspots for a range of threatened mammals. However, the transboundary Lathitila reserve forest in Moulvibazar district of northeast Bangladesh remained largely unexplored. We assessed the diversity of medium- and small-sized mammals using camera-trapping, and distance sampling, which was supplemented by sign survey and interviews. We recorded a total of 38 species of mammals belonging to 9 orders and 22 families. The Carnivora (34%) contained the highest number of mammals followed by Rodentia (21%), Primates (18%), Chiroptera (10%), and Artiodactyla (5%). Thirty seven percent of the recorded species were rare, followed by very common (26%), occasional (24%) and common (13%). Of these, 45% were categorized as threatened in the updated national Red List of IUCN Bangladesh. The remarkable species that we recorded are the Critically Endangered Asian elephant (Elephas maximus), Western hoolock gibbon (Hoolock hoolock), Chinese pangolin (Manis pentadactyla), Phayre’s leaf monkey (Trachypithecus phayrei), Northern pig-tailed macaque (Macaca leonina), and Bengal slow loris (Nycticebus bengalensis). The Endangered Fishing cat (Prionailurus viverrinus), and Asian small-clawed otter (Aonyx cinerea) were also recorded. The principal threats to the Lathitila forest are the habitat degradation, habitat fragmentation, human disturbance, illegal wood extraction, and wildlife poaching. This study highlights the conservation importance of this least-known forest, thereby protection measures are urgently needed to conserve its diverse mammalian fauna. Bangladesh J. Zool. 51(2): 135-154, 2023

Establishing and managing protected areas is a common approach for in situ conservation of wildlife and their habitats, but its effectiveness relies on the magnitude of anthropogenic pressures and their successful mitigation. Bangladesh is a densely populated country, and demand for land and natural resources is accelerated in and around the remaining forests. It is particularly of concern for an important transboundary hill forest, called the Patharia Hill Reserve in the northeastern Bangladesh, which appears to be the last resort for many important forest mammals. We conducted a camera-trap survey for assessing the occurrence of mammals in this tropical forest patch during January 2019 and July 2021. An effort of 2,805 trap-nights yielded 1,986 records of 22 medium and large-sized mammal species. We confirmed the presence of globally ‘Vulnerable’ Fishing Cat, Oriental Small-clawed Otter, Hog Badger, &amp; Northern Pig-tailed Macaque and the globally ‘Endangered’ Phayre’s Langur in this study. Our records include a number of species which are either the first record for the northeastern region or have been detected after several decades. In contrast, we could not detect several large carnivores which were recorded previously in the study site and in the Indian side of Patharia Hill Reserve. This study highlights the conservation value of this poorly known reserve forest, and presents a call for immediate action to maintain its function as a transboundary forest area.

HIV-1 is a highly host-specific retrovirus that infects humans but not most nonhuman primates. Thus, the lack of a suitable primate model that can be directly infected with HIV-1 hinders HIV-1/AIDS research. In the previous study, we have found that the northern pig-tailed macaques (NPMs) are susceptible to HIV-1 infection but show a nonpathogenic state. In this study, to understand this macaque-HIV-1 interaction, we assembled a de novo genome and longitudinal transcriptome for this species during the course of HIV-1 infection. Using comparative genomic analysis, a positively selected gene, Toll-like receptor 8, was identified with a weak ability to induce an inflammatory response in this macaque. In addition, an interferon-stimulated gene, interferon alpha inducible protein 27, was upregulated in acute HIV-1 infection and acquired an enhanced ability to inhibit HIV-1 replication compared with its human ortholog. These findings coincide with the observation of persistently downregulated immune activation and low viral replication and can partially explain the AIDS-free state in this macaque following HIV-1 infection. This study identified a number of unexplored host genes that may hamper HIV-1 replication and pathogenicity in NPMs and provided new insights into the host defense mechanisms in cross-species infection of HIV-1. This work will facilitate the adoption of NPM as a feasible animal model for HIV-1/AIDS research.

Zika virus (ZIKV) is a potential threat to male reproductive health but the mechanisms underlying its influence on testes during ZIKV infection remain obscure. To address this question, we perform single-cell RNA sequencing using testes from ZIKV-infected mice. The results reveal the fragility of spermatogenic cells, especially spermatogonia, to ZIKV infection and show that the genes of the complement system are significantly upregulated mainly in infiltrated S100A4 + monocytes/macrophages. Complement activation and its contribution to testicular damage are validated by ELISA, RT‒qPCR and IFA and further verify in ZIKV-infected northern pigtailed macaques by RNA genome sequencing and IFA, suggesting that this might be the common response to ZIKV infection in primates. On this basis, we test the complement inhibitor C1INH and S100A4 inhibitors sulindac and niclosamide for their effects on testis protection. C1INH alleviates the pathological change in the testis but deteriorates ZIKV infection in general. In contrast, niclosamide effectively reduces S100A4 + monocyte/macrophage infiltration, inhibits complement activation, alleviates testicular damage, and rescues the fertility of male mice from ZIKV infection. This discovery therefore encourages male reproductive health protection during the next ZIKV epidemic.

Tetherin prevents viral cross-species transmission by inhibiting the release of multiple enveloped viruses from infected cells. With the evolution of simian immunodeficiency virus of chimpanzees (SIVcpz), a pandemic human immunodeficiency virus type 1 (HIV-1) precursor, its Vpu protein can antagonize human tetherin (hTetherin). Macaca leonina (northern pig-tailed macaque [NPM]) is susceptible to HIV-1, but host-specific restriction factors limit virus replication in vivo. In this study, we isolated the virus from NPMs infected with strain stHIV-1sv (with a macaque-adapted HIV-1 env gene from simian-human immunodeficiency virus SHIV-KB9, a vif gene replaced by SIVmac239, and other genes originating from HIV-1NL4.3) and found that a single acidic amino acid substitution (G53D) in Vpu could increase its ability to degrade the tetherin of macaques (mTetherin) mainly through the proteasome pathway, resulting in an enhanced release and resistance to interferon inhibition of the mutant stHIV-1sv strain, with no influence on the other functions of Vpu. IMPORTANCE HIV-1 has obvious host specificity, which has greatly hindered the construction of animal models and severely restricted the development of HIV-1 vaccines and drugs. To overcome this barrier, we attempted to isolate the virus from NPMs infected with stHIV-1sv, search for a strain with an adaptive mutation in NPMs, and develop a more appropriate nonhuman primate model of HIV-1. This is the first report identifying HIV-1 adaptations in NPMs. It suggests that while tetherin may limit HIV-1 cross-species transmission, the Vpu protein in HIV-1 can overcome this species barrier through adaptive mutation, increasing viral replication in the new host. This finding will be beneficial to building an appropriate animal model for HIV-1 infection and promoting the development of HIV-1 vaccines and drugs.

Tuberculosis (TB) is a zoonotic disease that affects humans and domesticated and wild animals. Animals in zoos are potentially an important source of TB for humans; however they are often neglected in routine disease surveillance programs. This investigation reports an outbreak of TB in milu deer and northern pig-tailed macaques in a zoo in Wuhan, China, which highlighted the need for improved prevention and control of TB in China. Between 24 November and 9 December 2020 two milu deer and a northern pig-tailed macaque that were displaying signs of wasting died. Post-mortem, histopathological diagnosis and acid fast staining were used for the dead animals. Multiple PCR for Mycobacterium tuberculosis complex (MTBC) was performed to identify the bacterial in both milu deer and northern pig-tailed macaque. The serum antibody iELISA for MTBC was then performed for all the surviving milu deer and northern pig-tailed macaques. Six seropositive milu deer and a seropositive northern pig-tailed macaque were subsequently euthanised and, along with two other dead milu deer, necropsied. DNA from these tissue samples was extracted and detected MTBC using PCR and Real-time PCR. Subsequently bacterial isolation was used to confirm the infection. The lungs of the dead animals displayed gross and histological TB-like lesions and changes, and red staining bacilli were detected in smears of the lesions by microscopy after acid fast staining. Mycobacterium bovis (M. bovis) was detected in the two milu deer and Mycobacterium tuberculosis (M. tb) in the northern pig-tailed macaque using multiple PCR for MTBC. 35.3% surviving milu deer and 50% surviving northern pig-tailed macaques MTBC serologically positive. Six of the euthanised milu deer were also positive on a DNA test for M. bovis and the euthanised northern pig-tailed macaque was positive to M. tb. This is the first report of tuberculosis in the endangered species, milu deer and northern pig-tailed macaques, in China, and warrants urgent attention by researchers and conservation authorities. These cases highlight the need for expanding surveillance for MTBC to zoos in China.

Context With the ongoing biodiversity crisis and the continued loss of species, it becomes crucial to find practical solutions to monitor threatened animal populations for wildlife conservation and management. However, in practice, monitoring is especially challenging for elusive, rare, and wide-ranging species, where estimating abundance is often expensive and time-consuming. Alternatively, estimating occupancy (i.e. detection/non-detection data) may be less resource-intensive, while still providing useful information for monitoring population trends. Aims We aimed to describe a new field method, the random walk grid survey, to conduct a habitat selection study on elusive diurnal forest-dwelling primates. We explored how to improve occupancy estimates when detection probability is low and determined the minimal effort needed for reasonable estimates on the species habitat selection by using site-occupancy models. Methods We collected data to assess the northern pigtailed macaques’ (Macaca leonina) occupancy and detection probability using a random walk survey of degraded forest fragments in Sakaerat Biosphere Reserve in Northeast Thailand. We ran simulations to identify what is required for minimum survey efforts to obtain reasonable estimates of occupancy and detection probability on small or relatively large spatial scales, covering a small primate community in Southeast Asia. Key results Simulations showed that the probability of detecting macaques increased dramatically with an increased survey effort. However, compared with similar line-transect survey methods, the random walk grid survey was less time-consuming. Additionally, the occupancy and habitat selection estimates were similar to our knowledge of macaque distribution within the study area. Conclusions Our findings suggest that the new random walk grid survey method is effective to assess the elusive northern pigtailed macaques’ occupancy, and to provide reliable data on habitat selection where there is low macaque abundance and detection probability in a degraded forest fragment. Implications Our survey protocol could be used as a starting point to target high location occupancy to start habituation processes, but also for further intensive studies on primate behaviour and habitat use of primate communities. Finally, combining the random walk grid survey with automated recording devices (e.g. camera traps or passive acoustic surveys) could help improve occupancy and detection probability estimates for long-term monitoring programs and over large spatial scales.

Pneumonia Caused by Klebsiella pneumoniae in a Pig-tailed Macaque (Macaca leonina)

Simple SummaryIn the current context of climate change and forest cover degradation, the dispersal potential of trees is an issue of great importance. This is particularly the case in the tropics, where trees often need animals to disperse their seeds, as this increases the chances of survival of the progeny and allows migration in the face of climate change. An accurate representation of animal movement is therefore necessary to study the colonization potential of trees in new areas. We have conceived an innovative mathematical model describing the individual movement of gregarious animals, integrating several fundamental features of collective behaviors: cohesion maintenance, feeding area search and leadership. The model was applied to simulate the movements of a wild-ranging troop of primates in a nature reserve. As a result, the model allowed us to simulate the movement of the troop, taking into account the movement and individual characteristics of each member, which is important to consider when the group is composed of many individuals. In the future, this model could be used to improve existing zoochoric seed dispersal models and can be coupled with dynamic vegetation models to predict the shifts of trees species distribution under future climate hypotheses.In the tropics, the conservation of tree species is closely linked to that of animals, as a large proportion of trees are zoochoric and therefore rely on the movement of animals to disperse their seeds in order to increase the chances of the survival of progeny and to allow migration in the face of climate change. Research into the prediction of animal movements is therefore critical but has so far focused only on particular features of collective behavior. In contrast, we included the concepts of cohesion maintenance, feeding area search and transient leadership in a single model, CoFee-L, and tested it to simulate the movement of a wild-ranging troop of primates (Macaca leonina). We analyzed and compared observations and simulations with a statistical physics tool (mean squared displacement) and with histograms and χ2 (for the step length and turning angle distributions). CoFee-L allowed us to simulate the physical properties of the troop’s center of mass trajectory as well as the step length and angle distributions of the field data. The parametrization of CoFee-L was rather straightforward, as it was sufficient to fix a set of parameters easily observable in the field and then to adjust the values of four parameters that have biological meaning.

Population, behavior and conservation status of the northern pig-tailed macaque (Macaca leonina) in the Inner-line reserve forest, Assam, India

Raghunandan Hills Reserve is an important protected area in Bangladesh that supports some remnant patches of natural forest and is the habitat of several globally threatened primates including Western Hoolock Gibbon, Northern Pig-tailed Macaque, and Capped Langur. However, deforestation and forest degradation due to anthropogenic factors, such as illegal logging and fuelwood collection are age-old problems at Raghunandan. The areas of the reserve vulnerable to future conversions due to the possible proximate or underlaying causes were unknown. This study analyzed the historical trend of forest and land-use/landcover transitions at Raghunandan Hills Reserve from 1995 until 2015 at a 10-year interval using Monte Carlo spectral unmixing and knowledge-based classification approaches to Landsat satellite images in Claslite and ArcGIS software. Based on the past trend, it then predicted the future trend of forest land-use/landcover transitions for 2025 and 2035 using an artificial multi-layer perceptron neural network with Markov Chain machine learning algorithm integrated into the land change modeler module of IDRISI/TerrSet software. Results indicated that ∼30 % to 35% of the total area of the reserve was covered by forest, which included patches of natural forest and plantations, whereas the remaining area was occupied by non-forest categories like scattered degraded forests, grasses, and shrubs. Forest cover declined during 1995–2005, and then increased slightly during 2005–2015 due to afforestation activities. This trend is likely to continue in the future with forest cover occupying nearly 40% of the reserve by 2025 and 2035. Along with identifying the areas where the forest is likely to be expanded, the areas of the reserve vulnerable to deforestation (hotspots) were also highlighted and quantified in the form of maps and statistics. The findings have useful implications for any forest conservation initiatives including the global climate change mitigation program reducing emissions from deforestation and forest degradation+, which requires identifying at-risk areas of planned and unplanned deforestation.

Pulmonary microbial invasion frequently occurs during AIDS progression in HIV patients. Inflammatory cytokines and other immunoregulatory factors play important roles in this process. We previously established an AIDS model of SIVmac239 infection in northern pig-tailed macaques (NPMs), which were divided into rapid progressor (RP) and slow progressor (SP) groups according to their AIDS progression rates. In this study, we performed 16S rDNA and transcriptome sequencing of the lungs to reveal the molecular mechanism underlying the difference in progression rate between the RPs and SPs. We found that microbial invasion in the RP group was distinct from that in the SP group, showing marker flora of the Family XI, Enterococcus and Ezakiella, and more Lactobacilli. Through pulmonary transcriptome analysis, we found that the transcription factor ZNF683 had higher expression in the SP group than in the RP group. In subsequent functional experiments, we found that ZNF683 increased the proliferation and IFNγ secretion ability of CD8+ T cells, thus decreasing SIV or HIV replication, which may be related to AIDS progression in SIVmac239-infected NPMs. This study helps elucidate the various complexities of disease progression in HIV-1-infected individuals.

HIV-1 but not SIVmac239 induces higher interferon-α antiviral state in chronic infected northern pig-tailed macaques (Macaca leonina)