Logical stochastic resonance (LSR) systems are physical nonlinear systems capable of robust Boolean logic operations under the influence of noise. While LSR systems suitable for electronic circuit implementation have been extensively studied, research on condensed matter LSR systems remains limited to constrained bistability with saturation characteristic. Considering the presence of periodic nonlinearities in many physical systems, a deformable sine-Gordon-shaped Remoissenet–Peyrard potential (RPP)-based LSR system is proposed for the first time in this work. Testing under both noise-free and noisy conditions proves the existence of parameter-induced LSR phenomena in the proposed system. Moreover, we find that a relatively wide potential well shape contributes to enhanced noise robustness in the RPP-based LSR system. Additionally, traditional polynomial nonlinearity-based LSR systems are compared with the proposed system. Regardless of whether the noise is Gaussian white noise or composite noise containing spiking pulses, the RPP-based LSR system exhibits superior robustness. The results demonstrate the exceptional advantages of the RPP-based LSR system and encourage further design of condensed matter LSR systems based on deformable periodic nonlinearities.