Little Evidence Of Local Adaptation Research Articles

Low levels of regional differentiation and little evidence for local adaptation in rare arable plants

A better understanding of regional differentiation and local adaptation of rare arable plants is essential for the development of suitable methods for the reintroduction of these species. We set up F1 and F2 greenhouse experiments with 4–12 source populations of five rare arable plant species to test for genetically based differentiation in biomass production and phenology in South Germany. For three species, i.e. Arnoseris minima, Consolida regalis and Teesdalia nudicaulis, reciprocal transplant experiments were performed in arable fields to investigate local adaptation in plant establishment as well as biomass production to the northern or southern regions of three seed transfer zones. We found low regional differentiation, but provenance-specific responses to drought stress in Legousia speculum-veneris biomass and A. minima phenology. Moreover, little evidence was identified for local adaptation, while significant differences were seen in the performance between the transplant sites and study years, indicating a high phenotypic variability. Our results suggest that the current seed zones are suitable for the seed transfer of rare arable plants in the study region. Thus, there is a low risk of maladaptation when using autochthonous seed sources within the seed zones, but a high extinction risk of these species and their respective ecosystem functions if no active restoration is done, including transplant measures.

Skull shape of a widely distributed, endangered marsupial reveals little evidence of local adaptation between fragmented populations.

The biogeographic distribution of diversity among populations of threatened mammalian species is generally investigated using population genetics. However, intraspecific phenotypic diversity is rarely assessed beyond taxonomy‐focused linear measurements or qualitative descriptions. Here, we use a technique widely used in the evolutionary sciences—geometric morphometrics—to characterize shape diversity in the skull of an endangered marsupial, the northern quoll, across its 5,000 km distribution range along Northern Australia. Skull shape is a proxy for feeding, behavior, and phenotypic differentiation, allowing us to ask whether populations can be distinguished and whether patterns of variation indicate adaptability to changing environmental conditions. We analyzed skull shape in 101 individuals across four mainland populations and several islands. We assessed the contribution of population, size, sex, rainfall, temperature, and geography to skull shape variation using principal component analysis, Procrustes ANOVA, and variation partitioning analyses. The populations harbor similar amounts of broadly overlapping skull shape variation, with relatively low geographic effects. Size predicted skull shape best, coinciding with braincase size variation and differences in zygomatic arches. Size‐adjusted differences in populations explained less variation with far smaller effect sizes, relating to changes in the insertion areas of masticatory muscles, as well as the upper muzzle and incisor region. Climatic and geographic variables contributed little. Strikingly, the vast majority of shape variation—76%—remained unexplained. Our results suggest a uniform intraspecific scope for shape variation, possibly due to allometric constraints or phenotypic plasticity beyond the relatively strong allometric effect. The lack of local adaptation indicates that cross‐breeding between populations will not reduce local morphological skull (and probably general musculoskeletal) adaptation because none exists. However, the potential for heritable morphological variation (e.g., specialization to local diets) seems exceedingly limited. We conclude that 3D geometric morphometrics can provide a comprehensive, statistically rigorous phenomic contribution to genetic‐based conservation studies.

No evidence for local adaptation and an epigenetic underpinning in native and non-native ruderal plant species in Germany.

Many invasive species have rapidly adapted to different environments in their new ranges. This is surprising, as colonization is usually associated with reduced genetic variation. Heritable phenotypic variation with an epigenetic basis may explain this paradox.Here, we assessed the contribution of DNA methylation to local adaptation in native and naturalized non‐native ruderal plant species in Germany. We reciprocally transplanted offspring from natural populations of seven native and five non‐native plant species between the Konstanz region in the south and the Potsdam region in the north of Germany. Before the transplant, half of the seeds were treated with the demethylation agent zebularine. We recorded survival, flowering probability, and biomass production as fitness estimates.Contrary to our expectations, we found little evidence for local adaptation, both among the native and among the non‐native plant species. Zebularine treatment had mostly negative effects on overall plant performance, regardless of whether plants were local or not, and regardless of whether they were native or non‐native. Synthesis. We conclude that local adaptation, at least at the scale of our study, plays no major role in the success of non‐native and native ruderal plants. Consequently, we found no evidence yet for an epigenetic basis of local adaptation.

High intraspecific phenotypic variation, but little evidence for local adaptation in Geum reptans populations in the Central Swiss Alps

The Alpine landscape is characterized by high spatiotemporal heterogeneity in environmental variables, such as climate and soil characteristics. This may lead to divergent selection pressures across plant populations and to local adaptation. Geum reptans, a widespread high-alpine clonal herb, has been the subject of several studies investigating phenotypic variation in populations across the Swiss Alps, yet so far, there is only little knowledge about local adaptation in this species from reciprocal transplantations across original field sites. Here, we reciprocally transplanted three populations of Geum reptans in the Central Swiss Alps, growing at close or far geographical distance from each other, and compared growth- and reproduction-related traits to investigate patterns of local adaptation. We further measured leaf morphological traits to assess potential selection at field sites, and quantified the relative importance of genetic vs. environmental variation (i.e., phenotypic plasticity) for all traits. Additionally, among and within population genetic differentiation was analyzed using microsatellite markers. Molecular diversity was high within populations, and molecular differentiation increased with geographic distance among populations, suggesting that gene flow is maintained at close range, but decreased with distance. Although extensive phenotypic variation was found across site × population transplant combinations, our study revealed little evidence for local adaptation in G. reptans populations. Plant traits also showed strong plasticity, as revealed by pronounced site effects, yet no direct linear selection was detected on leaf trait values within field sites. We suggest that the glacier forelands studied here, which are representative of the habitat of large G. reptans populations, are too similar in environmental conditions to lead to among population intraspecific differentiation in line with local adaptation. As G. reptans showed a great capacity to respond plastically to environmental conditions, we cautiously advocate that the evolution of phenotypic plasticity might have prevailed over genetic differentiation for the adaptation to the relatively narrow niche of this species.

Extensive variation, but not local adaptation in an Australian alpine daisy.

Alpine plants often occupy diverse habitats within a similar elevation range, but most research on local adaptation in these plants has focused on elevation gradients. In testing for habitat‐related local adaptation, local effects on seed quality and initial plant growth should be considered in designs that encompass multiple populations and habitats. We tested for local adaptation across alpine habitats in a morphologically variable daisy species, Brachyscome decipiens, in the Bogong High Plains in Victoria, Australia. We collected seed from different habitats, controlled for maternal effects through initial seed size estimates, and characterized seedling survival and growth in a field transplant experiment. We found little evidence for local adaptation for survival or plant size, based on three adaptation measures: Home versus Away, Local versus Foreign, and Sympatric versus Allopatric (SA). The SA measure controlled for planting site and population (site‐of‐origin) effects. There were significant differences due to site‐of‐origin and planting site effects. An important confounding factor was the size of plants directly after transplantation of seedlings, which had a large impact on subsequent seedling survival and growth. Initial differences in plant width and height influenced subsequent survival across the growing season but in opposing directions: wide plants had higher survival, but tall plants had lower survival. In an additional controlled garden experiment at Cranbourne Royal Botanic Gardens, site‐of‐origin effects detected in the field experiments disappeared under more benign homogeneous conditions. Although B. decipiens from different source areas varied significantly when grown across a range of alpine habitats, these differences did not translate into a local or habitat‐related fitness advantage. This lack of local advantage may signal weak past selection, and/or weak adaptive transgeneration (plasticity) effects.

Seed source impacts germination and early establishment of dominant grasses in prairie restorations

Summary Land managers choose seed from a variety of provenances for restoration projects. By selecting seed of the local ecotype, managers can increase establishment in the short term and prevent the disruption of local adaptations and genetic swamping in the long term. However, local seed may be disadvantageous if populations are inbred or maladapted to managed restoration environments. Seed selection may be further confounded by propagation methods. Three dominant C4 grasses, Andropogon gerardii, Bouteloua curtipendula and Sorghastrum nutans, from three types of seed provenances (remnant, restoration and nursery) were planted as seeds and plugs into experimental plots at three established tallgrass prairie restorations in western Minnesota, USA. Using a common garden design, we tested whether (i) provenance and (ii) site of planting influence germination and first‐season survival and growth both (iii) for seeds directly planted in the field and for transplants (plugs). Seed provenance impacted germination and seedling survival in all cases, except S. nutans seeded directly in the field. Andropogon gerardii and B. curtipendula nursery seedlings were consistently taller than those of the other provenance types. When directly seeded, germination, survival and vigour differed among restoration sites; however, the results were species specific. Sorghastrum nutans germination varied among sites depending on provenance, indicating that this species may be particularly sensitive to environmental conditions. Germination was 3–12 times greater for plugs than for seeds directly planted in the field in summer, but mortality after planting in the field was low for both groups. Synthesis and applications. Provenance and restoration site had varying effects among species, indicating that the dominant C4 grasses used in this study ought not to be considered ecological equivalents. While we found little evidence of local adaptation, use of local remnant seeds diminishes the risk of spreading maladapted genotypes. Germination limited establishment when sowing seeds directly in summer. Supplemental use of plugs may increase species diversity in restorations.

Do stressful conditions make adaptation difficult? Guppies in the oil-polluted environments of southern Trinidad.

The ability of populations to rapidly adapt to new environments will determine their future in an increasingly human-modified world. Although meta-analyses do frequently uncover signatures of local adaptation, they also reveal many exceptions. We suggest that particular constraints on local adaptation might arise when organisms are exposed to novel stressors, such as anthropogenic pollution. To inform this possibility, we studied the extent to which guppies (Poecilia reticulata) show local adaptation to oil pollution in southern Trinidad. Neutral genetic markers revealed that paired populations in oil-polluted versus not-polluted habitats diverged independently in two different watersheds. Morphometrics revealed some divergence (particularly in head shape) between these environments, some of which was parallel between rivers. Reciprocal transplant experiments in nature, however, found little evidence of local adaptation based on survival and growth. Moreover, subsequent laboratory experiments showed that the two populations from oil-polluted sites showed only weak local adaptation even when compared to guppies from oil-free northern Trinidad. We conclude that guppies show little local adaptation to oil pollution, which might result from the challenges associated with adaptation to particularly stressful environments. It might also reflect genetic drift owing to small population sizes and/or high gene flow between environments.

Population structure, inbreeding and local adaptation within an endangered riverine specialist: the nase (Chondrostoma nasus)

Chondrostoma nasus is a cyprinid fish with highly specialized, ecologically and geographically distinct, ontogenetic trophic niches. Nase population numbers across their Swiss range have shown massive declines and many localized extinctions. In this study, we integrate genetic data (AFLP, microsatellite, mtDNA sequence) with phenotypic and demographic analyses to survey patterns of neutral and adaptive genetic diversity in all extant (and one extinct) Swiss nase populations, with the aim to delineate intraspecific conservation units (CUs) and to inform future population management strategies. We discovered two major genetically and geographically distinct population groupings. The first population grouping comprises nase inhabiting rivers flowing into Lake Constance; the second comprises nase populations from Rhine drainages below Lake Constance. Within these clusters there is generally limited genetic differentiation among populations. Genomic outlier scans based on 256 to 377 polymorphic AFLP loci revealed little evidence of local adaptation both within and among population clusters, with the exception of one candidate locus identified in scans involving the low genetic diversity Schanzengraben population. However, significant phenotypic differentiation in body shape between certain populations suggests a need for more intensive future studies of local adaptation. Our data strongly suggests that the two major population groups should be treated as distinct CUs, with any supplemental stocking and reintroductions sourced only from within the range of the CU concerned.

Little evidence for local adaptation to soils or microclimate in the post-fire recruitment of three Californian shrubs

Background: Seedling recruitment following fire is an infrequent yet critical demographic transition for woody plants in Mediterranean ecosystems.Aims: Here we examine whether post-fire seedling recruitment of three widespread Californian chaparral shrubs is affected by local adaptation within an edaphically and topographically complex landscape.Methods: We reciprocally transplanted 6-month-old seedlings of Adenostema fasciculatum, Ceanothus cuneatus and Eriodictyon californicum to serpentine and sandstone soils, and cool northerly and warm southerly slopes.Results: At the age of 2 years, none of the species manifested higher survival or growth on ‘home’ compared with ‘away’ soils or slopes, indicating an absence of local adaptation with respect to seedling recruitment in these environments. Seedlings of all species manifested lower survival and relative growth on serpentine soils regardless of seedling source, as well as a variety of other destination and source effects.Conclusions: The ability of these three species to recruit in new environments, such as in restoration settings or in response to shifting climates, is unlikely to be impeded by a need for seeds from sources that closely match their edaphic or topographic destination.

Swimming Performance and Energetics as a Function of Temperature in KillifishFundulus heteroclitus

Populations of the common killifish Fundulus heteroclitus are found along a latitudinal temperature gradient in habitats with high thermal variability. The objectives of this study were to assess the effects of temperature and population of origin on killifish swimming performance (assessed as critical swimming speed, U(crit)). Acclimated fish from northern and southern killifish populations demonstrated a wide zone (from 7 degrees to 33 degrees C) over which U(crit) showed little change with temperature, with performance declining significantly only at lower temperatures. Although we observed significant differences in swimming performance between a northern and a southern population of killifish in one experiment, with northern fish having an approximately 1.5-fold-greater U(crit) than southern fish across all acclimation temperatures, we were unable to replicate this finding in other populations or collection years, and performance was consistently high across all populations and at both low (7 degrees C) and high (23 degrees C) acclimation temperatures. The poor swimming performance of southern killifish from a single collection year was correlated with low muscle [glycogen] rather than with other indicators of fuel stores or body condition. Killifish acclimated to 18 degrees C and acutely challenged at temperatures of 5 degrees , 18 degrees , 25 degrees , or 34 degrees C showed modest thermal sensitivity of U(crit) between 18 degrees and 34 degrees C, with performance declining substantially at 5 degrees C. Thus, much of the zone of relative thermal insensitivity of swimming performance is intrinsic in this species rather than acquired as a result of acclimation. These data suggest that killifish are broadly tolerant of changing temperatures, whether acute or chronic, and demonstrate little evidence of local adaptation in endurance swimming performance in populations from different thermal habitats.

Population differentiation in an annual legume: local adaptation.

Studies of many plants species have demonstrated adaptive genetic differentiation to local environmental conditions. Typically these studies are conducted to evaluate adaptation to contrasting environments. As a consequence, although local adaptation has been frequently demonstrated, we have little information as to the spatial scale of adaptive evolution. We evaluated adaptive differentiation between populations of the annual legume Chamaecrista fasciculata using a replicated common-garden design. Study sites were established in three field locations that are home to native populations of C. fasciculata. Each location was planted for two years with seed from the population native to the study site (home population) and populations located six distances (0.1-2000 km) from each site (transplanted populations). Seeds were planted into the study sites with minimum disturbance to determine the scale of local adaptation, as measured by a home-site fitness advantage, for five fitness components: germination, survival, vegetative biomass, fruit production, and the number of fruit produced per seed planted (an estimate of cumulative fitness). For all characters there was little evidence for local adaptation, except at the furthest spatial scales. Patterns of adaptive differentiation were fairly consistent in two of the three sites, but varied between years. Little genetic variation was expressed at the third site. These results, combined with previous estimates of limited gene flow, suggest that metapopulation processes and temporal environmental variation act together to reduce local adaptation, except over long distances.

Should we allow human-induced migration of the Indo-West Pacific fish, barramundiLates calcarifer(Bloch) within Australia?

Some biologists have expressed concerns about the possible genetic impacts of translocation between stocks of barramundi Lates calcarifer (Bloch) in Australia. Recent genetic, biogeographical studies have provided an understanding of the evolution of the currently observed population structure in Australian barramundi by assessing the impacts of ice-age, sea-level changes on their distribution. These studies found that genetic differences between most barramundi populations are extremely small, have arisen in the past 17 000 years, and substantial migration and hybridization between eastern and western populations, isolated for at least 110 000 years, has occurred naturally. Some phenotypic support for these minor genetic differences can be inferred from the lack of adaptation to temperature in growth and survival responses of widely separated stocks (tropical and temperate). Based on a low level of genetic differentiation and high levels of gene flow between populations, with little evidence of local adaptation, translocation between populations should not pose a significant risk or problem.

Psychophysical signatures associated with magnocellular and parvocellular pathway contrast gain.

Physiological data have revealed characteristic contrast gain and temporal integration signatures of the magnocellular (MC) and the parvocellular (PC) pathways. The goal in this study was to find psychophysical correlates of these signatures. Psychophysical forced-choice, luminance pedestal discrimination data were collected with a stimulus-surround display. A 2.05 degrees four-square stimulus array was varied from 73 to 182 trolands (Td) in a larger 115-Td surround. When the stimulus array was pulsed briefly, discrimination thresholds showed a minimum at the surround retinal illuminance, increasing in a V shape when the stimulus array was incremental or decremental to the surround. When the stimulus array was presented continuously as a steady pedestal within the constant 115-Td surround, discrimination thresholds increased monotonically with stimulus array retinal illuminance, obeying a slope of unity. Exposure duration variation showed temporal summation to extend to longer durations for the pulse increments and decrements than for the steady pedestal condition. Discrimination thresholds for pulsed medium-sized contrast steps showed the contrast pedestal paradigm showed the temporal signature of the MC pathway. Discrimination thresholds for small pedestal steps of the stimulus array from a steady pedestal showed the contrast gain signature of the MC pathway. The data suggested a difference in the spatiotemporal control of adaptation of the two pathways: The MC pathway adapted locally to the stimulus array, while the PC pathways showed little evidence of local adaptation. The experiments show that characteristic signatures of MC- and PC-pathway processing can be demonstrated by use of psychophysical procedures.