Ion Yield Curves Research Articles

Resonant charge transfer in the interaction of hyperthermal anions with a technical graphite-like conducting surface

It was found that when the hyperthermal anions Br-, S- and SH- interact with the cleaned surface of soot, the intensity of the ion yield curves (IYC) of fragmentary anions S- and SH- decreases, while Br- does not. Based on the DFT calculations and the use of the induced charge model, it was shown that HOMO of the S- and SH- anions is located in the energy range of the conduction band of graphite, which allows an additional electron to tunnel from these anions to the surface and this leads to their neutralization.

HF Formation through Dissociative Electron Attachment-A Combined Experimental and Theoretical Study on Pentafluorothiophenol and 2-Fluorothiophenol.

In chemoradiation therapy, dissociative electron attachment (DEA) may play an important role with respect to the efficiency of the radiosensitizers used. The rational tailoring of such radiosensitizers to be more susceptive to DEA may thus offer a path to increase their efficiency. Potentially, this may be achieved by tailoring rearrangement reactions into the DEA process such that these may proceed at low incident electron energies, where DEA is most effective. Favorably altering the orbital structure of the respective molecules through substitution is another path that may be taken to promote dissociation up on electron capture. Here we present a combined experimental and theoretical study on DEA in relation to pentafluorothiophenol (PFTP) and 2-fluorothiophenol (2-FTP). We investigate the thermochemistry and dynamics of neutral HF formation through DEA as means to lower the threshold for dissociation up on electron capture to these compounds, and we explore the influence of perfluorination on their orbital structure. Fragment ion yield curves are presented, and the thermochemical thresholds for the respective DEA processes are computed as well as the minimum energy paths for HF formation up on electron capture and the underlying orbital structure of the respective molecular anions. We show that perfluorination of the aromatic ring in these compounds plays an important role in enabling HF formation by further lowering the threshold for this process and through favorable influence on the orbital structure, such that DEA is promoted. We argue that this approach may offer a path for tailoring new and efficient radiosensitizers.

Comparison of the fragmentations of phenanthrene and anthracene by low-energy electron impact

We have measured sets of mass spectra for positive ions produced by low-energy electron impact on phenanthrene. Ions have been mass resolved using a reflectron time-of-flight mass spectrometer, and the electron impact energy has been varied from 0 to 100 eV in steps of 0.5 eV. Ion yield curves of most of the fragment ions have been determined by fitting groups of adjacent peaks in the mass spectra with sequences of normalized Gaussians. The aim of this paper is to provide a detailed comparison of phenanthrene with its isomer anthracene, for which we have published results in a previous paper [1]. Appearance energies for a selection of fragment ions of phenanthrene have been determined, and are compared with anthracene. The most significant differences are observed in the ion yield curves of the ions containing 12 carbon atoms. The ion yield curves of phenanthrene have higher maximum yields and lower appearance energies compared to anthracene. For the fragments containing 9 and 10 carbon atoms the phenanthrene yields are slightly lower, but the appearance energies are the same as for anthracene. Small differences in yields are also observed for the fragments with 6 and 7 carbon atoms. The double and triple ionization energies of phenanthrene have been determined and are in agreement with anthracene.

Dipole-Supported Electronic Resonances Mediate Electron-Induced Amide Bond Cleavage.

Dissociative electron attachment (DEA) plays a key role in radiation damage of biomolecules under high-energy radiation conditions. The initial step in DEA is often rationalized in terms of resonant electron capture into one of the metastable valence states of a molecule followed by its fragmentation. Our combined theoretical and experimental investigations indicate that the manifold of states responsible for electron capture in the DEA process can be dominated by core-excited (shake-up) dipole-supported resonances. Specifically, we present the results of experimental and computational studies of the gas-phase DEA to three prototypical peptide molecules, formamide, N-methylformamide (NMF), and N,N-dimethyl-formamide (DMF). In contrast to the case of electron capture by positively charged peptides in which amide bond rupture is rare compared to N─C_{α} bond cleavage, fragmentation of the amide bond was observed in each of these three molecules. The ion yield curves for ions resulting from this amide bond cleavage, such as NH_{2}^{-} for formamide, NHCH_{3}^{-} for NMF, and N(CH_{3})_{2}^{-} for DMF, showed a double-peak structure in the region between 5 and 8eV. The peaks are assigned to Feshbach resonances including core-excited dipole-supported resonances populated upon electron attachment based on high-level electronic structure calculations. Moreover, the lower energy peak is attributed to formation of the core-excited resonance that correlates with the triplet state of the neutral molecule. The latter process highlights the role of optically spin-forbidden transitions promoted by electron impact in the DEA process.

Insights into the dehydrogenation of 2-thiouracil induced by slow electrons: Comparison of 2-thiouracil and 1-methyl-2-thiouracil.

In the present contribution, we study dissociative electron attachment to 1-methyl-2-thiouracil that has been synthesized and purified prior to the measurements. We compare the results with those previously obtained from 2-thiouracil. The comparison of the yield of the dehydrogenated parent anion from both the compounds allows us to assign the site from which the H atom is expulsed and to predict the mechanism that is involved in the formation of the peaks within the ion yield curve. It appears that the dehydrogenation observed for 2-thiouracil arising from the vibrational Feshbach resonances (at 0.7 and 1.0 eV) and a π*/σ* transition (at 0.1 eV) involves the bond cleavage at the N1 site, while that at the N3 site operates via the π*/σ* transition and occurs in the energy range of 1.1-3.3 eV. Besides the loss of the H atom from 1-methyl-2-thiouracil, we observe a relatively strong signal due to the loss of an entire methyl group (not observed from methyl-substituted thymine and uracil) that is formed from the N1-CH3 bond cleavage and can mimic the N-glycosidic bond cleavage within the DNA macromolecule.

Hydrogen rearrangements in the fragmentation of anthracene by low-energy electron impact

We have measured mass spectra for positive ions produced by low-energy electron impact on anthracene using a reflectron time-of-flight mass spectrometer. The electron impact energy has been varied from 0 to 100 eV in steps of 0.5 eV. Ion yield curves of most of the fragment ions have been determined by fitting groups of adjacent peaks in the mass spectra with sequences of normalized Gaussians. Appearance energies for all these ions have been determined, and we report the first direct measurement of the triple ionization energy of anthracene at 45.5 +/- 0.5 eV. The groups of fragments containing 8-13 carbon atoms provide evidence for hydrogen rearrangements during the fragmentation, involving retention or loss of one or two additional hydrogen atoms. Groups of fragments with 6 and 7 carbon atoms clearly show the presence of doubly-charged fragments. The smaller fragments with 1-4 carbon atoms all show broadened peaks, and these fragments may be partly or mostly due to energetic charge-separation fragmentations of doubly-charged anthracene.

Negative ion formation through dissociative electron attachment to the group IV tetrachlorides: Carbon tetrachloride, silicon tetrachloride and germanium tetrachloride

The current contribution constitutes the third and final part of our trilogy of papers on electron attachment reactions of the group IV tetrahalides; XY4 (X=C, Si, Ge and Y=F, Cl, Br). In this context we extend our previous studies on XF4 and XBr4 and report results for electron attachment to the tetrachlorides: CCl4, SiCl4 and GeCl4 in the incident electron energy range from about 0 to 10eV. At the same time we give a summary of the currently available literature on electron interactions with those latter compounds. Upon electron attachment the formation of Cl−, XCl3−, XCl2− and Cl2− is observed from all the tetrachlorides, and additionally the molecular anion SiCl4− is observed from SiCl4. The main DEA contributions are observed through narrow, threshold peaks (at 0eV) and we attribute these features to single particle resonances associated with the a1 symmetry LUMOs of those compounds. Contributions from another low-lying resonance, which we assign as a 2T2 shape resonance associated with the t2 symmetry LUMO+1, is also observed in the ion yield curves for all the tetrachlorides. The energy of the peak position of those contributions varies in the range from about 1 to 2eV, depending on the compound and the fragment formed. In addition to these low energy contributions, higher energy, fairly broad, features are observed for all the tetrachlorides. These contributions exhibit a peak in the energy range between 5 and 8eV, again depending on the compound and the fragment formed. Further to the experimental data, we report DFT and coupled cluster calculations on the thermochemical thresholds for the individual fragments as well as the respective bond dissociation energies and electron affinities. These calculated values are compared with the experimental appearance energies and literature values, where they are available.

Dissociative electron attachment to coordination complexes of chromium: chromium(0) hexacarbonyl and benzene-chromium(0) tricarbonyl.

Here we report the results of dissociative electron attachment (DEA) to gas-phase chromium(0) hexacarbonyl (Cr(CO)6) and benzene-chromium(0) tricarbonyl ((η6-C6H6)Cr(CO)3) in the energy range of 0–12 eV. Measurements have been performed utilizing an electron-molecular crossed beam setup. It was found that DEA to Cr(CO)6 results (under the given experimental conditions) in the formation of three fragment anions, namely [Cr(CO)5]−, [Cr(CO)4]−, and [Cr(CO)3]−. The predominant reaction channel is the formation of [Cr(CO)5]− due to the loss of one CO ligand from the transient negative ion. The [Cr(CO)5]− channel is visible via two overlapping resonant structures appearing in the energy range below 1.5 eV with a dominant structure peaking at around 0 eV. The peak maxima of the fragments generated by the loss of two or three CO ligands are blue-shifted and the most intense peaks within the ion yield curves appear at 1.4 eV and 4.7 eV, respectively. (η6-C6H6)Cr(CO)3 shows a very rich fragmentation pattern with decomposition leading to the formation of seven fragment anions. Three of them are generated from the cleavage of one, two or three CO ligand(s). The energy of the peak maxima of the [(C6H6)Cr(CO)2]–, [(C6H6)Cr(CO)]–, and [(C6H6)Cr]− fragments is shifted towards higher energy with respect to the position of the respective fragments generated from Cr(CO)6. This phenomenon is most likely caused by the fact that chromium–carbonyl bonds are stronger in the heteroleptic complex (η6-C6H6)Cr(CO)3 than in homoleptic Cr(CO)6. Besides, we have observed the formation of anions due to the loss of C6H6 and one or more CO units. Finally, we found that Cr−, when stripped of all ligands, is generated through a high-energy resonance, peaking at 8 eV.

Positive ion mass spectrometry for fragmentation of anthracene by low energy electron impact

SynopsisWe have studied the fragmentation of anthracene molecules induced by low energy electron impact. A reflectron time-of-flight mass spectrometer has been used to mass resolve and detect positively charged fragments. Using computer controlled data acquisition, mass spectra have been measured as a function of electron impact from 5 to 100 eV. The mass spectra show clear indications of double and triple ionization. Ion yield curves and appearance energies for most of the positive ions have been extracted from the data.

Positive ion mass spectrometry for fragmentation of 5-fluorouracil by low energy electron impact

SynopsisFragmentation of 5-fluorouracil in the gas phase has been studied using low energy electron impact. Positive ions have been mass resolved and detected using a reflectron time-of-flight mass spectrometer. Mass spectra have been measured as a function of electron impact from 5 to 100 eV, and ion yield curves and appearance energies for most of the positively charged fragments have been extracted.

Dipolar dissociation dynamics in electron collisions with carbon monoxide

SynopsisDipolar dissociation (DD) dynamics of carbon monoxide with electron collision has been studied using velocity slice imaging (VSI) technique. Threshold of the process has been obtained from the ion yield curve. Using the time sliced images kinetic energy and angular distribution have been obtained providing the detailed dynamics involved in the DD process. Two ion-pair states have been identified from the angular distribution measurements.

Revealing isomerism in sodium-water clusters: Photoionization spectra of Na(H2O)n (n = 2-90).

Soft ionization of sodium tagged polar clusters is increasingly used as a powerful technique for sizing and characterization of small aerosols with possible application, e.g., in atmospheric chemistry or combustion science. Understanding the structure and photoionization of the sodium doped clusters is critical for such applications. In this work, we report on measurements of photoionization spectra for sodium doped water clusters containing 2-90 water molecules. While most of the previous studies focused on the ionization threshold of the Na(H2O)n clusters, we provide for the first time full photoionization spectra, including the high-energy region, which are used as reference for a comparison with theory. As reported in previous work, we have seen an initial drop of the appearance ionization energy with cluster size to values of about 3.2 eV for n<5. In the size range from n = 5 to n = 15, broad ion yield curves emerge; for larger clusters, a constant range between signal appearance (∼2.8 eV) and signal saturation (∼4.1 eV) has been observed. The measurements are interpreted with ab initio calculations and ab initio molecular dynamics simulations for selected cluster sizes (n≤ 15). The simulations revealed theory shortfalls when aiming at quantitative agreement but allowed us identifying structural motifs consistent with the observed ionization energy distributions. We found a decrease in the ionization energy with increasing coordination of the Na atom and increasing delocalization of the Na 3s electron cloud. The appearance ionization energy is determined by isomers with fully solvated sodium and a highly delocalized electron cloud, while both fully and incompletely solvated isomers with localized electron clouds can contribute to the high energy part of the photoionization spectrum. Simulations at elevated temperatures show an increased abundance of isomers with low ionization energies, an entropic effect enabling size selective infrared action spectroscopy, based on near threshold photoionization of Na(H2O)n clusters. In addition, simulations of the sodium pick-up process were carried out to study the gradual formation of the hydrated electron which is the basis of the sodium-tagging sizing.

Electron-Induced Chemistry of Cobalt Tricarbonyl Nitrosyl (Co(CO)3NO) in Liquid Helium Nanodroplets.

Electron addition to cobalt tricarbonyl nitrosyl (Co(CO3NO) and its clusters has been explored in helium nanodroplets. Anions were formed by adding electrons with controlled energies, and reaction products were identified by mass spectrometry. Dissociative electron attachment (DEA) to the Co(CO)3NO monomer gave reaction products similar to those reported in earlier gas phase experiments. However, loss of NO was more prevalent than loss of CO, in marked contrast to the gas phase. Since the Co–N bond is significantly stronger than the Co–C bond, this preference for NO loss must be driven by selective reaction dynamics at low temperature. For [Co(CO)3NO]N clusters, the DEA chemistry is similar to that of the monomer, but the anion yields as a function of electron energy show large differences, with the relatively sharp resonances of the monomer being replaced by broad profiles peaking at much higher electron energies. A third experiment involved DEA of Co(CO)3NO on a C60 molecule in an attempt to simulate the effect of a surface. Once again, broad ion yield curves are seen, but CO loss now becomes the most probable reaction channel. The implication of these findings for understanding focused electron beam induced deposition of cobalt is described.

Partial ionization cross sections for positive fragments produced by electron impact on uracil

SynopsisFragmentation of uracil in the gas phase has been studied using low-energy electron impact. Positive ions have been detected using a reflectron time-of-flight mass spectrometer. Mass spectra have been measured as a function of electron impact from 0 to 100 eV, and ion yield curves most of the positively charged fragments have been extracted.

Electron impact fragmentation of adenine: partial ionization cross sections for positive fragments

Using computer-controlled data acquisition we have measured mass spectra of positive ions for electron impact on adenine, with electron energies up to 100 eV. Ion yield curves for 50 ions have been obtained and normalized by comparing their sum to the average of calculated total ionization cross sections. Appearance energies have been determined for 37 ions; for 20 ions for the first time. All appearance energies are consistent with the fragmentation pathways identified in the literature. Second onset energies have been determined for 12 fragment ions (for 11 ions for the first time), indicating the occurrence of more than one fragmentation process e.g. for 39 u (C2HN+) and 70 u (C2H4N 3 + ). Matching ion yield shapes (118–120 u, 107–108 u, 91–92 u, and 54–56 u) provide new evidence supporting closely related fragmentation pathways and are attributed to hydrogen rearrangement immediately preceding the fragmentation. We present the first measurement of the ion yield curve of the doubly charged parent ion (67.5 u), with an appearance energy of 23.5 ± 1.0 eV.

Surface-Assisted Laser Desorption/Ionization of Trinitrotoluene on Porous Silicon under Ambient Conditions

Desorption/ionization on silicon (DIOS) is widely used in modern mass spectrometry for obtaining ions of various organic substances. The high efficiency of DIOS suggests that it may be a promising method in ion-mobility spectrometry (IMS) using gas-phase ion separation. The influence of laser wavelength and intensity on DIOS of trinitrotoluene (TNT) molecules under ambient conditions has been studied. If laser with a wavelength of 266 or 355 nm is used, TNT molecules predominantly form (TNT – H)− negative ions. Their formation has been found to result from laser-induced proton transfer from TNT molecules to the porous silicon (pSi) surface, rather than gas-phase ion–molecule reactions. The dependence of the yield of (TNT – H)− ions on the laser intensity has been analyzed. The ion yield curve has been demonstrated to fit the Arrhenius function at laser intensity lower than ∼2.5×107 W/cm2. Experiments have shown that the desorption/ionization of TNT molecules is not a purely thermal process. The results demonstrate that DIOS can be widely used in the IMS technology.

Electron impact ionization of the gas-phase sorbitol

Ionization and dissociative ionization of the sorbitol molecule by electron impact have been studied using two different experimental methods. In the mass range of m/z = 10–190, the mass spectra of sorbitol were recorded at the ionizing electron energies of 70 and 30 eV. The ion yield curves for the fragment ions have been analyzed and the appearance energies of these ions have been determined. The relative total ionization cross section of the sorbitol molecule was measured using monoenergetic electron beam. Possible fragmentation pathways for the sorbitol molecule were proposed.

Photoionization Yields, Appearance Energies, and Densities of States of Copper Clusters

We present the results and analysis of photoionization measurements of neutral Cun=24–98 clusters, thermalized to T = 60 and 215 K. The photoion yield curves were used (1) to determine the cluster ionization appearance energies via a fit to the Fowler law of surface photoemission and (2) to explore the suitability of these curves for accessing information about electron states lying below the ionization threshold. The appearance energies follow a standard shell pattern up to n ≈ 40, but a subsequent structure suggests that the electronic shells become perturbed and split by crystal field effects. Nevertheless, it is apparent that the spectra are determined essentially by the number of delocalized electrons, i.e., by the sequential filling of electronic shell sublevels. The average shift of the appearance energies with cluster temperature was found to be in good agreement with a theoretical prediction for bulk copper. An important finding is that the derivatives of the ion yield curves overlap well with th...

Vacuum ultraviolet photoionization study of gas phase vitamins A and B1 using aerosol thermodesorption and synchrotron radiation.

Gas-phase studies of biomolecules are often difficult to initiate because of the thermolability of these systems. Such studies are nevertheless important to determine fundamental intrinsic properties of the molecules. Here we present the valence shell photoionization of gas-phase vitamins A and B1 close to their ionization threshold. The study was performed by means of an aerosol thermodesorption source coupled to an electron/ion coincidence spectrometer and synchrotron radiation (SOLEIL facility, France). Ion yield curves were recorded for both molecules over a few electronvolt energy range and the threshold photoelectron spectrum was also obtained for vitamin A. Some fundamental properties were extracted for both ions such as adiabatic and the three first vertical ionization energies of retinol (IEad = 6.8 ± 0.2 eV and IEvert = 7.4, 8.3, and 9.2 eV) and dissociation appearance energies for the main fragment ions of vitamin B1. Analysis of the data was supported by ab initio calculations which show a very good agreement with the experimental observations.

Electron impact fragmentation of thymine: partial ionization cross sections for positive fragments

We have measured mass spectra for positive ions for low-energy electron impact on thymine using a reflectron time-of-flight mass spectrometer. Using computer controlled data acquisition, mass spectra have been acquired for electron impact energies up to 100 eV in steps of 0.5 eV. Ion yield curves for most of the fragment ions have been determined by fitting groups of adjacent peaks in the mass spectra with sequences of normalized Gaussians. The ion yield curves have been normalized by comparing the sum of the ion yields to the average of calculated total ionization cross sections. Appearance energies have been determined. The nearly equal appearance energies of 83 u and 55 u observed in the present work strongly indicate that near threshold the 55 u ion is formed directly by the breakage of two bonds in the ring, rather than from a successive loss of HNCO and CO from the parent ion. Likewise 54 u is not formed by CO loss from 82 u. The appearance energies are in a number of cases consistent with the loss of one or more hydrogen atoms from a heavier fragment, but 70 u is not formed by hydrogen loss from 71 u.