The continuous development of urban rail transit networks has highlighted the mismatch between passenger demand and transportation capacity, necessitating more flexible transportation organization models. To achieve a more agile train operation organization, this paper employs “virtual grouping” technology to reduce running intervals and increase density, thereby maximizing line capacity, enhancing the service level of urban rail transit, and facilitating greater flexibility in various transportation organization modes, such as long and short routes, fast and slow trains, and Y-shaped routes. Initially, a transportation organization mode for virtual grouping trains was devised, leading to the establishment of an optimization model for the operation plan of large and small routes based on virtual grouping. Subsequently, considering the operation of large and small routes, virtual grouping, and stop-stop modes, the peak period of a specific urban rail transit line was selected as the research object. The objective was to minimize the weighted sum of passenger waiting time, vehicle mileage, and the number of online train sets. Decision variables included the starting and ending points of large and small routes, as well as their departure frequency. Taking into account constraints such as departure frequency, line capacity, virtual grouping intervals, full load rate, and vehicle inventory, a bi-level optimization model for the train operation plan was formulated. A nested genetic algorithm was devised to determine the optimal solution for the model. Lastly, using the operating conditions of Shijiazhuang Metro Line 1, the optimal results for passenger waiting time, vehicle mileage, and the number of train sets in the optimal train operation plan were obtained.
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