Pollutants and parasites represent stressors for fish at the individual, population, or community levels. The current study outlines the seasonal infestation pattern of Oreochromis niloticus by protozoan and helminths parasites linked to some physicochemical parameters (pH, dissolved oxygen, total dissolved solids, and electrical conductivity), and metals (Cd, Pb, Fe, Zn, and Ca), at nine selected sites in River Nile (Greater Cairo area) from summer 2019 till spring 2020. Most of the studied criteria in Nile water samples showed normal levels during all seasons compared to the recommended limits of EPA. The parasitological examinations recorded three protozoan categories: Myxobolus (8 species), hemoflagellates (Trypanosoma mukasi) and Ciliates (Trichodina compacta), and three helminths; Clinostomum sp., Acanthocephala sp. and Euclinostomum ardeola. The highest incidence of infection was determined for Clinostomum sp., followed in descending order by Myxobolus sp., Acanthocephala sp., T. mukasi, E. ardeolathen, and T. compacta. Notably, this study introduces the novel identification of new species of Myxobolus in the blood of Oreochromis niloticus. The histopathological examination of gills, muscles, and kidneys reveals serious changes and the presence of encysted trematodes, metacercariae, and cysts of protozoan parasites. Additionally, the study employs cluster analysis based on site similarity in water variables and canonical correspondence analysis, explaining 98.7 % of the variables and indicating correlations between parasite infestation and environmental factors. These analytical approaches reveal the impact of land use activities on water variables and the influence of adjacent activities on fish parasite infestation patterns. In conclusion, this study provides a comprehensive perspective by considering various factors to enhance our understanding of pollutants and parasites affecting fish in the River Nile.
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