Fertility In Cattle Research Articles

Genome-wide identification and annotation of SNPs and their mapping in candidate genes related to milk production and fertility traits in Badri cattle

This study was conducted in Badri cattle using a double digest restriction-site associated DNA sequencing approach. The study aimed to identify and annotate high confidence single nucleotide polymorphisms (SNPs) and their mapping in candidate genes related to production and fertility in dairy cattle. A total of 7,168,552 genome-wide SNPs were initially identified in Badri cattle by alignment with theBos indicusreference genome. After filtration of SNPs, 65,483 high confidence SNPs were retained and further used for downstream analysis. Annotation of high confidence SNPs revealed 99.197% SNPs had modifier impact, 0.326% SNPs were low impact, 0.036% were high impact, and 0.441% were moderate impact SNPs. Most SNPs in Badri cattle were found in intergenic, transcript and intronic regions. The candidate genes for milk production PRKCE, ABCG2, GHR, EPS8, CAST and NRXN1 were found to harbour maximum high confidence variants. Among candidate genes for fertility in cattle, ATP2B1, SOX5, WDR27, ARHGAP12, CACNA1D, ANKRD6, GRIA3, ZNF521 and CAST822 have maximum high confidence variants mapped in them. The SNPs found mapped in the candidate genes will be important genetic tools in the search for phenotype-modifying nucleotide changes and will aid in formulating relevant genetic improvement programmes for dairy cattle.

A Longitudinal Characterization of the Seminal Microbiota and Antibiotic Resistance in Yearling Beef Bulls Subjected to Different Rates of Gain.

In this study, we evaluated the seminal and fecal microbiota in yearling beef bulls fed a common diet to achieve moderate (1.13 kg/day) or high (1.80 kg/day) rates of weight gain. Semen samples were collected on days 0 and 112 of dietary intervention (n = 19/group) as well as postbreeding (n = 6/group) using electroejaculation, and the microbiota was assessed using 16S rRNA gene sequencing, quantitative PCR (qPCR), and culturing. The fecal microbiota was also evaluated, and its similarity with seminal microbiota was assessed. A subset of seminal bacterial isolates (n = 33) was screened for resistance against 28 antibiotics. A complex and dynamic microbiota was detected in bovine semen, and the community structure was affected by sampling time (R2 = 0.16, P < 0.001). Microbial richness increased significantly from day 0 to day 112, and diversity increased after breeding (P > 0.05). Seminal microbiota remained unaffected by the differential rates of gain, and its overall composition was distinct from fecal microbiota, with only 6% of the taxa shared between them. A total of 364 isolates from 49 different genera were recovered under aerobic and anaerobic culturing. Among these seminal isolates were pathogenic species and those resistant to several antibiotics. Overall, our results suggest that bovine semen harbors a rich and complex microbiota which changes over time and during the breeding season but appears to be resilient to differential gains achieved via a common diet. Seminal microbiota is distinct from the fecal microbiota and harbors potentially pathogenic and antibiotic-resistant bacterial species. IMPORTANCE Increasing evidence from human and other animal species supports the existence of a commensal microbiota in semen and that this seminal microbiota may influence not only sperm quality and fertility but also female reproduction. Seminal microbiota in bulls and its evolution and factors shaping this community, however, remain largely underexplored. In this study, we characterized the seminal microbiota of yearling beef bulls and its response to the bull age, different weight gains, and mating activity. We compared bacterial composition between seminal and fecal microbiota and evaluated the diversity of culturable seminal bacteria and their antimicrobial resistance. Our results obtained from sequencing, culturing, and antibiotic susceptibility testing provide novel information on the taxonomic composition, evolution, and factors shaping the seminal microbiota of yearling beef bulls. This information will serve as an important basis for further understanding of the seminal microbiome and its involvement in reproductive health and fertility in cattle.

Adaptation of phlegfix simmental cattle to the mountainous climate and formation of breeding and production potential in Uzbekistan

Today in Uzbekistan it is important to strengthen the breeding base of cattle, increase the fertility and productivity of cattle. One of the main methods is purebred breeding breeds and crossbreeding with regionalized cattle breeds. Fertilization of Holstein breeds in hot climates, the formation of productive genetic potential of cattle of different genotypes, and the interaction of genotype-environment have not been sufficiently studied. Group I received 20% bloody holstin and 80% bloody simmental cattle obtained by crossing Simmantal cattle with red-and-Holstein breed. In groups II and III purebred phlegfix simmental-red-ola simmental cattle were selected. The cattle in this experiment were cared for in the storage and feeding conditions of the farm in the mountains.

Improved fertility in dairy cattle with low body condition using equine chorionic gonadotropin in fixed-time artificial insemination

Con el objetivo de evaluar el efecto de la utilización de la gonadotrofina coriónica equina (eCG) en un protocolo de inseminación artificial a tiempo fijo (IATF) a base de progesterona (P4) y la condición corporal (CC), sobre la fertilidad de vacas mantenidas bajo un sistema de producción tradicional (SPT); se desarrolló una investigación, empleando un diseño completo al azar, con arreglo factorial 2×2, siendo los factores la CC (3,00 ≤ CC ≤ 2,75) y la administración de 400 Unidades Internacionales (UI) de eCG, formando cuatro tratamientos (T) con 50 animales cada uno. T1 vacas sincronizadas con CC ≤ 2,75 y sin aplicación de eCG; T2 vacas sincronizadas con CC ≤ 2,75 y con aplicación de eCG; T3 vacas sincronizadas con CC ≥ 3,00 y sin aplicación de eCG; T4 vacas sincronizadas con CC ≥ 3,00 y con aplicación de eCG. El protocolo base fue: Día cero, aplicación del dispositivo intravaginal (DIV) de progesterona, más 2 miligramos (mg) de benzoato de estradiol (BE), el día 7, retiro del DIV más 500 microgramos (µcg) de cloprostenol sódico, día 8, 1 mg de BE, Día 9 la IATF, 56 horas de haber retirado el DIV. La eCG se administró al momento de retirar el DIV. Los valores de fertilidad fueron para el T1: 22,0 %; T2: 44,0 %; T3: 46,0 % y T4: 48,0 %, con diferencias significativas (P&lt;0,05) entre el T1 y los otros T. Los resultados indican que la administración de eCG, mejora la fertilidad de vacas con baja CC, en SPT de leche.

Direct cleavage during the first mitosis is a sign of abnormal fertilization in cattle

Direct cleavage, a type of abnormal cleavage in which one zygote divides into three or more blastomeres, has been reported in mammals. The incidence of direct cleavage increases in zygotes with three or more pronuclei (multi-PN) and those showing abnormal pronuclei migration. However, there are few reports on the relationship between pronuclei and direct cleavage, and the effects of these relationships on subsequent embryogenesis have not been clarified. It is difficult to observe pronuclei under visible light, especially in bovine zygotes, because of abundant dark lipid droplets in the cytoplasm. We visualized pronuclei by removing lipid droplets from bovine zygotes and analyzed the relationship between the number of pronuclei and direct cleavage using time-lapse cinematography. The direct cleavage rate of multi-PN zygotes was 78.6%, which was significantly higher than that of zygotes with one pronucleus (1 PN, 0.0%) and two pronuclei (2 PN, 8.2%). Observation of pronuclei migration in 2 PN zygotes showed that 3.1% of 2 PN zygotes had non-apposed pronuclei. The direct cleavage rate of zygotes with non-apposed pronuclei was 66.7%, which was significantly higher than that of zygotes with apposed pronuclei (6.4%). Among multi-PN zygotes, the proportions of zygotes with apposed pronuclei and non-apposed pronuclei were 37.5% and 64.3%, respectively. The direct cleavage rate of multi-PN zygotes with non-apposed pronuclei was 100.0%, which was significantly higher than that of zygotes with apposed pronuclei (40.0%). Three-dimensional live-cell imaging of bovine zygotes injected with the mRNA-encoding histone H2B-mCherry showed that the direct cleavage rates of 2 PN and multi-PN zygotes bypassing syngamy were 63.2% and 75.5%, respectively. These rates were significantly higher than that of 2 PN and multi-PN zygotes that underwent syngamy (5.6% and 20.0%, respectively). Regardless of the number of pronuclei, a high frequency of direct cleavage was observed in zygotes in which the pronuclei did not migrate inward the cytoplasm and bypassed syngamy. These results suggest that abnormal fertilization such as multi-PN and migration error of pronuclei in cattle is the primary reason for direct cleavage during the first mitosis. Assessment of direct cleavage during the first mitosis allows exclusion of embryos with abnormal fertilization and may contribute to in vitro produced embryo transfer success.

Estimation of the Genetic Components of (Co)variance and Preliminary Genome-Wide Association Study for Reproductive Efficiency in Retinta Beef Cattle.

In this study, we analyzed the variation of reproductive efficiency, estimated as the deviation between the optimal and real parity number of females at each stage of the cow's life, in 12,554 cows belonging to the Retinta Spanish cattle breed, using classical repeatability and random regression models. The results of the analyses using repeatability model and the random regression model suggest that reproductive efficiency is not homogeneous throughout the cow's life. The h2 estimate for this model was 0.30, while for the random regression model it increased across the parities, from 0.24 at the first calving to 0.51 at calving number 9. Additionally, we performed a preliminary genome-wide association study for this trait in a population of 252 Retinta cows genotyped using the Axiom Bovine Genotyping v3 Array. The results showed 5 SNPs significantly associated with reproductive efficiency, located in two genomic regions (BTA4 and BTA28). The functional analysis revealed the presence of 5 candidate genes located within these regions, which were previously involved in different aspects related to fertility in cattle and mice models. This new information could give us a better understanding of the genetic architecture of reproductive traits in this species, as well as allow us to accurately select more fertile cows.

Effect of using liquid semen on fertility in German Holstein Friesian dairy cattle: A randomized controlled clinical trial

Low fertility rates in lactating dairy cows as well as restricted availability of semen doses of young bulls with high genetic merit are two major problems in the reproduction of dairy cows. By using liquid semen (LS), the number of doses per ejaculate can be increased. One of the challenges of optimizing the reproductive performance of dairy cows is the phenomenon of variable estrus lengths. The objective of this study was to determine whether the use of LS affects pregnancy outcome of dairy cows with delayed ovulation, when compared with frozen semen (FS). A randomized controlled clinical trial was implemented. In a split-sample procedure, 131 ejaculates were processed into LS (Caprogen, LIC, New Zealand) and FS (BioXcell, IMV, France). Both semen types of each ejaculate were inseminated under the same field conditions to cows showing natural or induced heat. Cows and semen type were allocated according to the last digit of the cows identification number (even = frozen semen, odd = liquid semen). Inseminations (n = 667) were conducted after localization of the pre-ovulatory follicle. Determination of ovulation was performed 24 h post AI per transrectal ultrasonographic examination. Ovulations were classified as delayed when the pre-ovulatory follicle was still present at ovulation control. The prevalence of delayed ovulations was 25.2%. Data of 667 inseminations were analyzed with a generalized linear mixed model including semen type (P = 0.016), parity (P = 0.014), backfat thickness (P = 0.006), estrus induction (P = 0.010), ovulation (P = 0.265) and the interaction term ‘semen type by ovulation’ (P = 0.094). Overall, a higher pregnancy per AI (P/AI) of LS (45.4%) than P/AI of FS (33.7%) was found. In cases of delayed ovulations, use of LS resulted in higher P/AI (46.8%) compared with FS (27.7%; P = 0.017). We concluded that the fertilizing capacity of LS in prolonged intervals from AI to ovulation might be greater when compared with FS and could be an efficient tool to improve fertility of lactating dairy cows with delayed ovulations.

Applying assisted reproductive technology and reproductive management to reduce CO2-equivalent emission in dairy and beef cattle: a review.

Methane emission from beef and dairy cattle combined contributes around 4.5-5.0% of total anthropogenic global methane. In addition to enteric methane (CH4) produced by the rumen, cattle production also contributes carbon dioxide (CO2) (feed), nitrous oxide (N2O) (feed production, manure) and other CH4 (manure) to the total greenhouse gas (GHG) budget of beef and dairy production systems. The relative contribution in standard dairy systems is typically enteric CH4 58%, feed 29% and manure 10%. Herds with low production efficiency can have an enteric CH4 contribution up to 90%. Digestibility of feed can impact CH4 emission intensity. Low fertility herds also have a greater enteric CH4 contribution. Animals with good feed conversion efficiency have a lower emission intensity of CH4/kg of meat or milk. Feed efficient heifers tend to be lean and have delayed puberty. Fertility is a major driver of profit in both beef and dairy cattle, and it is highly important to apply multi-trait selection when shifting herds towards improved efficiency and reduced CH4. Single nucleotide polymorphisms (SNPs) have been identified for feed efficiency in cattle and are used in genomic selection. SNPs can be utilized in artificial insemination and embryo transfer to increase the proportion of cattle that have the attributes of efficiency, fertility and reduced enteric CH4. Prepubertal heifers genomically selected for favourable traits can have oocytes recovered to produce IVF embryos. Reproductive technology is predicted to be increasingly adopted to reduce generation interval and accelerate the rate of genetic gain for efficiency, fertility and low CH4 in cattle. The relatively high contribution of cattle to anthropogenic global methane has focussed attention on strategies to reduce enteric CH4 without compromising efficiency and fertility. Assisted reproductive technology has an important role in achieving the goal of multiplying and distributing cattle that have good efficiency, fertility and low CH4.

Genetic and nongenetic variation of heifer fertility in Italian Holstein cattle

Excellent fertility performance is important to maximize farmers' profit and to reduce the number of culled animals. Although female fertility of adult cows has been included in Italian Holstein breeding objectives since 2009, little has been done to quantify genetic variation of heifer fertility characteristics so far. The aim of the present study was to estimate genetic parameters of 4 fertility traits in nulliparous Italian Holstein heifers and to develop an aggregate selection index to improve heifer fertility. Data were retrieved from the national fertility database and included information on insemination, calving, and pregnancy diagnosis dates. The investigated phenotypes (mean ± standard deviation) were age at first insemination (AFI, mo; 17.25 ± 2.89), nonreturn rate at 56 d from the first insemination (NRR56, binary; 0.78 ± 0.41), conception rate at first insemination (CR, binary; 0.61 ± 0.49), and interval from first to last insemination (IFL, d; 26.09 ± 51.85). Genetic parameters were estimated using a 4-trait animal model that included the following fixed effects: herd-year of birth and month of birth for AFI, and herd-year-season of birth and month-year of insemination for IFL, NRR56, and CR; the animal additive genetic effect (fitted to the pedigree-based relationship matrix) was considered as a random term. An aggregate index was developed from the estimated additive genetic (co)variance matrix by considering CR as the breeding goal and AFI, NRR56, and IFL as selection criteria. Heritability estimates from average covariance matrices ranged from 0.012 (CR) to 0.015 (IFL), with the exception of AFI (0.071). Conception rate at first insemination was strongly correlated with both IFL (−0.730) and NRR56 (0.668), and weakly to AFI (−0.065), and the relative emphasis placed on each selection criteria in the aggregate index was 10%, 47%, and 43% for AFI, IFL, and NRR56, respectively. The results of the present study suggest that heifer fertility should be considered as an additional trait in the breeding objectives of Italian Holstein.

Seminal and vagino-uterine microbiome and their individual and interactive effects on cattle fertility.

Reproductive failure is a major economical drain on cow-calf operations across the globe. It can occur in both males and females and stem from prenatal and postnatal influences. Therefore, the cattle industry has been making efforts to improve fertility and the pregnancy rate in cattle herds as an attempt to maintain sustainability and profitability of cattle production. Despite the advancements made in genetic selection, nutrition, and the implementation of various reproductive technologies, fertility rates have not significantly improved in the past 50 years. This signifies a missing factor or factors in current reproductive management practices that influence successful fertilization and pregnancy. Emerging lines of evidence derived from human and other animals including cattle suggest that the microbial continuum along the male and female reproductive tracts are associated with male and female fertility-that is, fertilization, implantation, and pregnancy success-highlighting the potential for harnessing the male and female reproductive microbiome to improve fertility in cattle. The objective of this narrative review is to provide an overview of the recent studies on the bovine seminal and vagino-uterine microbiome and discuss individual and interactive roles of these microbial communities in defining cattle fertility.

Superovulatory response, anti-Müllerian hormone concentration and antral follicle count in Holstein cattle with short or long anogenital distance

To understand the mechanisms underlying the inverse relationship between anogenital distance (AGD) and fertility in dairy cattle, we determined if embryo yield and quality differed between cattle of short- and long-AGD (Study 1), and whether anti-Müllerian hormone (AMH), antral follicle count (AFC) and superovulation responses differed by AGD group (Study 2). In Study 1, records of embryo yield and quality in Holstein heifers (n = 43) and cows (n = 14) from two commercial dairy herds were analyzed, retrospectively. Short- and long-AGD groups were based on the median AGD cut-points of 113 and 134 mm, for heifers and cows, respectively. The mean numbers of total (7.4 vs. 9.0; 9.4 vs.12.9), fertilized ova (5.6 vs. 6.2; 6.6 vs. 6.9), and viable embryos (4.4 vs. 4.8; 5.9 vs. 5.3) per heifer and cow did not differ between cattle of short vs. long AGD. Short-AGD cows, however, had greater proportions of fertilized ova (69.7 vs. 53.3%; P = 0.07) and viable embryos (62.1 vs. 41.1%; P = 0.03) than long-AGD cows. The odds of short-AGD cows yielding fertilized ova and viable embryos were 2.0 and 4.0 times greater, respectively, than the odds of long-AGD cows. In Study 2, lactating cows (n = 24) of a research herd had their AGD categorized as in Study 1, and AFC, AMH, and superovulation responses (i.e., no. of preovulatory follicles [≥ 10 mm] and CL) were determined. Mean AFC (27 ± 4.5 vs. 21 ± 4.0) and CL (9 ± 1.6 vs. 7 ± 1.4) per cow did not differ between short- and long-AGD groups. Serum AMH concentration (pg/mL) was lesser in short-AGD cows compared with long-AGD cows (114 ± 30.4 vs. 200 ± 26.8; P = 0.05), but the no. of preovulatory follicles was greater (15 ± 1.9 vs. 8 ± 1.7; P = 0.01) in short-AGD than in long-AGD cows. The overall proportion of follicles ≥10 mm was also greater in short-AGD cows than in long-AGD cows (56 vs 44%; P = 0.03). Preovulatory follicle number was affected by a parity x AGD group interaction (P = 0.04), with multiparous short-AGD cows accounting for the largest number of follicles. No associations were found among AGD, AFC and AMH. The associations between AFC and superovulation responses (follicles: r = 0.67, and CL: 0.58; P < 0.01) were moderate but AMH was not associated with superovulation responses. In summary, whereas AGD-associated differences in the yield and quality of embryos were not evident in heifers, the proportions of fertilized ova and viable embryos were greater in short-AGD than in long-AGD cows. In addition, the proportion of preovulatory follicles, an indicator of superovulatory response, was greater in short-AGD cows than in long-AGD cows.

Developmental Programming of Fertility in Cattle-Is It a Cause for Concern?

Simple SummaryPoor fertility is the main reason for premature culling of cattle. Dam factors and external variables can both influence how the calf fetus develops, known as fetal programming. Dam factors include age, parity, body condition, health and milk yield. External variables include nutrition and the environment during pregnancy. These all affect placental growth and the nutrient supply to the fetus, which in turn influence the size, shape and body composition of the calf. Postnatal growth rates, organ structure and immunity can all be affected. The impact on organs such as ovaries, liver, pancreas, lungs, spleen and thymus is dependent on the stage of pregnancy during which the fetal environment is sub-optimal. Regulatory systems which influence growth, metabolism and fertility can be permanently reprogrammed. Most changes affecting fertility are probably indirect. For example, calf health, the timing of puberty, age and size at first calving, and the ability to adapt to lactation after calving can all alter future reproductive potential. The size of these effects is hard to quantify due to practical difficulties in obtaining data over a sufficient time period. Nevertheless, there is compelling evidence that the fertility of some cows is compromised by events happening before their birth.Cattle fertility remains sub-optimal despite recent improvements in genetic selection. The extent to which an individual heifer fulfils her genetic potential can be influenced by fetal programming during pregnancy. This paper reviews the evidence that a dam’s age, milk yield, health, nutrition and environment during pregnancy may programme permanent structural and physiological modifications in the fetus. These can alter the morphology and body composition of the calf, postnatal growth rates, organ structure, metabolic function, endocrine function and immunity. Potentially important organs which can be affected include the ovaries, liver, pancreas, lungs, spleen and thymus. Insulin/glucose homeostasis, the somatotropic axis and the hypothalamo-pituitary-adrenal axis can all be permanently reprogrammed by the pre-natal environment. These changes may act directly at the level of the ovary to influence fertility, but most actions are indirect. For example, calf health, the timing of puberty, the age and body structure at first calving, and the ability to balance milk production with metabolic health and fertility after calving can all have an impact on reproductive potential. Definitive experiments to quantify the extent to which any of these effects do alter fertility are particularly challenging in cattle, as individual animals and their management are both very variable and lifetime fertility takes many years to assess. Nevertheless, the evidence is compelling that the fertility of some animals is compromised by events happening before they are born. Calf phenotype at birth and their conception data as a nulliparous heifer should therefore both be assessed to avoid such animals being used as herd replacements.

Graduate Student Literature Review: Effects of human chorionic gonadotropin on follicular and luteal dynamics and fertility in cattle.

Circulating progesterone concentrations during the growth of the ovulatory follicle and early embryo development have been positively associated with embryo quality and survival and pregnancy success. As a potent luteotropic agent with LH-like activity, human chorionic gonadotropin (hCG) has been tested in different studies to improve pregnancy outcomes by increasing circulating progesterone concentrations during the growth of the ovulatory follicle or early embryonic development. Nevertheless, hCG has produced inconsistent, contradictory, and intriguing results. Furthermore, recent research indicates that hCG, when used before artificial insemination, may affect physiological events necessary for the ovulation of a viable oocyte. In addition, the use of hCG-inducing accessory corpus luteum during the estrous cycle seems to disturb luteolysis and follicle and luteal dynamics during the estrous cycle. This literature review discusses past and current research exploring the effects of hCG on the estrous cycle characteristics and pregnancy per artificial insemination and embryo transfer.

PSVIII-B-13 Machine Learning-Based co-Expression Network Analysis Unravels Fertility-Related Genes in Beef Cattle

Abstract Reproductive efficiency is a critical component of a sustainable cow-calf system. While several studies have identified factors underlying fertility, the genetic mechanisms contributing to this complex trait are still unclear. Our goal was to identify a set of predictive biomarker signatures from transcriptomics data associated with female cattle fertility. We implemented a multi-tiered approach using machine learning (ML) feature selection, gene co-expression network, and functional analysis. To this end, we retrieved public data from the Gene Expression Omnibus database (GEO GSE171577). The RNA-Seq data was generated from uterine luminal epithelial cells of recipient cows sampled on day four before embryo transfer. The data (n = 18 non-pregnant – NP and n = 25 pregnant – P) were analyzed using a standard pipeline based on FastQC, MultiQC, STAR, and DESeq2. Genes with expression values &amp;gt; 0.5 counts per million in 50% of the samples were filtered out. Feature and model selection was implemented through BioDiscML. Further, the PCIT algorithm was used to create gene co-expression networks from 15,039 genes kept after quality control. Our ML approach identified nine genes as predictors of pregnancy status. The genes included: SERPINE3, MRTFA, MEF2B, NAA16, ARHGEF7, PDCD1, FNDC1, ENSBTAG00000054585, and ENSBTAG00000019474. The networks from P and NP cows resulted in five and four thousand significantly co-expressed gene pairs, respectively. We then kept 1,837 pairs with a |r| &amp;gt; 0.7 and were co-expressed with the gene predictors from the ML analysis. Biological processes, such as vasculature development, oxidative phosphorylation, and focal adhesion were over-represented by genes from the P network. We identified immune system development, negative regulation of the biological process, and protein modification over-represented processes in the NP gene network. We have demonstrated the potential of combining different methods to identify fertility-related biomarkers and have provided insights into the complex genomic basis underlying pregnancy establishment in cattle.

Shifts in uterine bacterial communities associated with endogenous progesterone and 17β-estradiol concentrations in beef cattle

The relation between circulating concentrations of progesterone and 17β-estradiol prior to insemination play a key role in optimizing fertility in cattle. This study aimed to determine the impact of endogenous progesterone (P4) and estradiol (E2) concentrations on uterine bacterial community abundance and diversity in beef cattle. Angus-influenced heifers were subjected to an industry standard estrous synchronization protocol. Uterine flushes were collected on d -2 (endogenous P4) and d 0 (endogenous E2) and used for targeting the V4 hypervariable region of 16S rRNA bacterial gene. Plasma was collected on d -2 and 0 for quantification of P4 and E2 concentrations by radioimmunoassay, respectively. Heifers were allotted to one of the following groups: High P4 + High E2 (H-H; n = 11), High P4 + Low E2 (H-L; n = 9), Low P4 + High E2 (L-H; n = 9), Low P4 + Low E2 (L-L; n = 11). Results indicated that Shannon's diversity index tended to be greater for H-L heifers compared to L-H heifers on d 0 (P = 0.10). For H-L heifers from d -2 to d 0, the relative abundance of Actinobacteria decreased and Tenericutes increased (P < 0.01). Within phylum Actinobacteria, the relative abundance of Corynebacterium decreased from d -2 to d 0 in treatment groups H-H, H-L, and L-L (P < 0.05); however, did not differ by d for L-H heifers. Within phylum Tenericutes, the relative abundance of Ureaplasma increased from d -2 to d 0 for H-L heifers (P = 0.01). Additionally for H-L heifers, the relative abundance of Bacteroidetes tended to increase from day -2 to on d 0 (P = 0.07). For H-L heifers, uterine pH increased from day -2 to d 0 (P = 0.05). These results suggest that differing endogenous concentrations of P4 and E2 may be associated with shifts in uterine microbiota and pH, and this could ultimately impact fertility outcomes in beef cattle.

Unrevealing functional candidate genes for bovine fertility through RNA sequencing meta-analysis and regulatory elements networks of co-expressed genes and lncRNAs.

The high genetic heterogeneity and environmental effects of subfertility in livestock species make the elucidation of the genetic mechanisms associated with reproductive efficiency a difficult task. Network and co-expression network meta-analyses were applied alongside genetic variant calling and long non-coding RNA (lncRNA) characterization to identify functionally relevant target genes and regulatory subnetworks associated with fertility in dairy cattle. In total, 505 lncRNAs (441 previously annotated in the bovine reference genome ARS-UCD 1.2 and 64 novel lncRNAs) were identified. Seven differentially expressed genes between high-fertile (HF) and sub-fertile (SF) Holstein cows were identified in the network meta-analysis (CA5A, ENSBTAG00000051149, ENSBTAG00000003272, DEFB7, DIO2, TRPV3, and COL4A4). Additionally, seven functional candidate differentially co-expressed (DcoExp) modules with a differential regulatory pattern (|z-score|>2) were identified between HF and SF cows. The functional candidate genes and DcoExp modules identified were associated with fertility relevant processes such as the regulation of embryonic implantation and proliferation, interaction and molecule transfer between the fetus and the cow, and the immune system. These results help to better understand the genetic mechanisms associated with reproductive efficiency in dairy cattle through the identification of potential biomarkers and genetic variants associated with differentially expressed regulatory gene and lncRNAs regulatory element networks.

Cow activity measurements can be used to define new fertility traits for use in genetic evaluation

Cow activity measurements are widely used in herd management tools for estrus detection. The aim of this study was to examine whether a new trait based on activity measures can be useful for genetic evaluation of cow fertility in Norwegian Red dairy cattle. Data from 284 herds with Lely milking robot were collected. Daily measurements of cow activity level were available from Lely activity tags and included data from 13,224 lactations of 8,139 Norwegian Red cows. We analyzed daily activity and included records from 10 to 150 d in milk for cows with at least 50 records. The trait analyzed was interval from calving to first high activity (CFHA). In total 87% of the cows had at least one episode of high activity recorded. The mean (standard deviation) of CFHA was 42 (28) days. A linear animal repeatability model with fixed effects of month-year of calving, age-parity, and herd, and random animal and permanent environment effects was used for estimation of variance components. The trait CFHA showed significant genetic variation with a heritability of 0.05 (0.01). This trait reflects the cow's ability to return to estrus cycle and show estrus after calving, which are important aspects of cow fertility.

¿ES POSIBLE MEJORAR LA FERTILIDAD CON PROTOCOLOS DE PROESTRO PROLONGADO? BASES FISIOLÓGICAS, RESULTADOS Y NUEVAS PERSPECTIVAS

The objective of this work was to carry out a bibliographic search of all the programs with prolonged proestrus in the fertility of bovine cattle dedicated to meat production. The use of artificial insemination at fixed time (IATF) in cattle has not stopped growing in the countries of the region during the last 20 years, demonstrating that it is a technology that is here to stay. Its adoption curve is in a stage of maturity, having first been adopted by the most innovative and today it is already used by more pragmatic or conservative producers. Therefore, in this review we will emphasize the protocols that we have worked the most in recent years and with which high pregnancy rates have been achieved.

A Prospective Cohort Study on the Periparturient Muscle Tissue Mobilisation in High Producing Dairy Cows.

Simple SummaryThe objectives of this study were to (i) investigate the changes in muscle tissue reserves in high producing dairy cows before and after calving, (ii) identify factors associated with these changes, and (iii) describe their possible associations with cattle reproductive performance. Data were collected from 455 cows on three different UK farms. Holstein cows mobilise both fat and muscle tissue reserves before and after calving. Significant differences in the amount of muscle mobilised were identified between farms; this could have been associated with pre calving diets. Higher genetic merit for milk yield was associated with lower muscle tissue reserves. An increased time to first service was described for those animals that mobilised more muscle tissue.Excessive periparturient fat mobilisation and its association with dairy cattle health and fertility is well documented; however, the role of muscle mobilisation has not been studied extensively. The objectives of this study were to (i) investigate the changes in the thickness of the longissimus dorsi muscle in high producing dairy cows during the periparturient period, (ii) identify factors associated with these changes, and (iii) describe their possible associations with cattle reproductive performance. Data were collected from a total of 500 lactations from 455 cows on three different UK farms. Muscle thickness (MT) (Longissimus dorsi) and back fat thickness (BFT) measurements were collected at three different time-points during the periparturient period using ultrasonography. Body condition score (BCS) was also assessed at the same time-points and blood samples were collected for the measurement of non-esterified fatty acids. Farm fertility records were used and genomically estimated breeding values were also available. Associations between variables were analysed with the use of multivariable linear and logistic regression models; Cox proportional hazard analysis was used for fertility outcomes. Muscle thickness decreased pre- to post-calving on all three farms, though they were notable between farm differences. Those animals with a lower BCS pre-calving had a higher MT loss; significant fat mobilisation occurred between the calving and early lactation period. Muscle thickness changes and fat mobilisation were not associated in this study. An increased time to first service was described for those animals that mobilised more muscle tissue. Our study advances the understanding of periparturient muscle tissue mobilisation in dairy cattle and highlights its potential associations with cattle fertility.

Characterization of histone lysine β-hydroxybutyrylation in bovine tissues, cells, and cumulus-oocyte complexes.

Besides their canonical roles as energy sources, short-chain fatty acids act as metabolic regulators of gene expression through histone posttranslational modifications. Ketone body β-hydroxybutyrate (BHB) causes a novel epigenetic modification, histone lysine β-hydroxybutyrylation (Kbhb), which is associated with genes upregulated in starvation-responsive metabolic pathways. Dairy cows increase BHB in early lactation, and the effects of this increase on cellular epigenomes are unknown. We searched for and identified that Kbhb is present in bovine tissues in vivo and confirmed that this epigenetic mark is responsive to BHB in bovine and human fibroblasts cultured in vitro in a dose-dependent manner. Maturation of cumulus-oocyte complexes with high concentrations of BHB did not affect the competence to complete meiotic maturation or to develop until the blastocyst stage. BHB treatment strongly induced H3K9bhb in cumulus cells, but faintly in oocytes. RNA-seq analysis in cumulus cells indicated that BHB treatment altered the expression of 345 genes. The downregulated genes were mainly involved in glycolysis and ribosome assembly pathways, while the upregulated genes were involved in mitochondrial metabolism and oocyte development. The genes and pathways altered by BHB will provide entry points to carry out functional experiments aiming to mitigate metabolic disorders and improve fertility in cattle.