The present paper reports the influence of hot work (isothermal deformation accompanied with heat treatment) on microstructure and properties of electron beam welded dissimilar joint. Ti2AlNb alloy and TC11 alloy were used to fabricate the joints. Isothermal deformation and heat treatment were performed under certain conditions. The structures were analysed using optical microscopy, X-ray diffraction, scanning electron microscopy and transmission electron microscopy. The results show that the as welded metal of Ti2AlNb/TC11 joint is mainly composed of α2 and β phases. The metastable β phase transformed into α+β phases during deformation and heat treatment processes. There are no big differences in tensile strength of joints under different conditions. However, the impact toughness of the weld has improved 72% after hot work.