Distribution Of Testate Amoebae Research Articles

Biodiversity of Terrestrial Testate Amoebae in Western Siberia Lowland Peatlands

Testate amoebae are unicellular eukaryotic organisms covered with an external skeleton called a shell. They are an important component of many terrestrial ecosystems, especially peatlands, where they can be preserved in peat deposits and used as a proxy of surface wetness in paleoecological reconstructions. Here, we represent a database from a vast but poorly studied region of the Western Siberia Lowland containing information on TA occurrences in relation to substrate moisture and WTD. The dataset includes 88 species from 32 genera, with 2181 incidences and 21,562 counted individuals. All samples were collected in oligotrophic peatlands and prepared using the method of wet sieving with a subsequent sedimentation of aqueous suspensions. This database contributes to the understanding of the distribution of testate amoebae and can be further used in large-scale investigations.

Diversity and distribution of testate amoeba (Testaceae) in the moss Pleurozium schreberi

Testate amoebae are worldwide-distributed protists living in soils, freshwaters, and wetlands, but their presence and diversity in Lithuania are poorly known. The published information mainly reflects collections from freshwater, meanwhile knowledge about the diversity of these protozoa in bryophytes remains limited. To overcome this limitation, a study was conducted on the moss Pleurozium schreberi by sampling it from several localities to provide information on the distribution of testate amoebae and the composition of the species. In this study, 19 species of testate amoebae were recorded. The species richness varied from six to 15 species per sample. The most frequently occurring testate amoebae were eurybiont species Corythion dubium, Trinema enchelys, Euglypha strigosa, Centropyxis aerophylla-complex, and Euglypha laevis. The most diverse genus was Euglypha (five species). The peculiarities of habitats and environmental contamination are possible factors that determined the character of the composition and structure of testate amoebae communities. These data help to improve knowledge of the geographical distribution of testate amoebae in eastern Europe and their diversity in Lithuania.

Ecology of peatland testate amoebae in Svalbard and the development of transfer functions for reconstructing past water-table depth and pH

Peatlands are valuable archives of information about past environmental conditions and represent a globally-important carbon store. Robust proxy methods are required to reconstruct past ecohydrological dynamics in high-latitude peatlands to improve our understanding of change in these carbon-rich ecosystems. The High Arctic peatlands in Svalbard are at the northern limit of current peatland distribution and have experienced rapidly rising temperatures of 0.81 °C per decade since 1958. We examine the ecology of peatland testate amoebae in surface vegetation samples from permafrost peatlands on Spitsbergen, the largest island of the Svalbard archipelago, and develop new transfer functions to reconstruct water-table depth (WTD) and pH that can be applied to understand past peatland ecosystem dynamics in response to climate change. These transfer functions are the first of their kind for peatlands in Svalbard and the northernmost developed to date. Multivariate statistical analysis shows that WTD and pore water pH are the dominant controls on testate amoeba species distribution. This finding is consistent with results from peatlands in lower latitudes with regard to WTD and supports work showing that when samples are taken across a long enough trophic gradient, peatland trophic status is an important control on the distribution of testate amoebae. No differences were found between transfer functions including and excluding the taxa with weak idiosomic tests (WISTs) that are most susceptible to decay. The final models for application to fossil samples therefore excluded these taxa. The WTD transfer function demonstrates the best performance (R2LOO = 0.719, RMSEPLOO = 3.2 cm), but the pH transfer function also performs well (R2LOO = 0.690, RMSEPLOO = 0.320). The transfer functions were applied to a core from western Spitsbergen and suggest drying conditions ~1750 CE, followed by a trend of recent wetting and increasing pH from ~1920 CE. These new transfer functions allow the reconstruction of past peatland WTD and pH in Svalbard, thereby enabling a greater understanding of long-term ecohydrological dynamics in these rapidly changing ecosystems.

The ecology of testate amoebae and Cladocera in Hawaiian montane peatlands and development of a hydrological transfer function

Peatland complexes in the humid highlands of Hawai‘i are vital refuges of biodiversity and freshwater resources. Hawaiian peat deposits are also rare repositories of terrestrial ecosystem archives located in an otherwise vast expanse of ocean. We investigated the potential for researching the paleohydrological history of Hawaiian montane peatlands on Kohala, Hawai‘i Island through analyses of testate amoebae and Cladocera. Surface peat was collected from a variety of ecohydrological habitats (from water pools to hummocks) and analyzed for modern testate amoeba and cladoceran species relative abundance. We identified 54 morphotype taxa from 21 genera of testate amoebae, 4 taxa and genera of littoral Cladocera, and the common peat rotifer Habrotrocha angusticollis. Testate amoeba diversity and morphotype occurrence mirrored observations from many high-latitude peatland studies. Constrained and unconstrained ordinations support the hypothesis that surface moisture, measured as water-table depth, is an important control on the distribution of testate amoebae and Cladocera in Hawaiian peatlands. Transfer functions relying on weighted-averaging and modern analogs were developed to predict water-table depths from species relative abundance data, and these perform well under leave-one-site-out cross-validation: RMSEP = 9.75–10.3 cm, R2 = 0.56–0.62. Including cladoceran abundance data in the calibration dataset produced modest model improvement: RMSEP = 1–8% and R2 = 2–13%. A weighted-average partial-least-squares transfer function was applied to microfossil assemblages from a 0.5 m-long peat core with a 210Pb decay chronology anchored by ten existing measurements of 210Pb activity and a Bayesian statistical framework. Microfossils were well-preserved in the peat core. The water-table depth optima of an abundant down-core taxa, Hyalosphenia subflava, is not precisely constrained in the calibration data set, but estimates match those of other tropical studies. A reconstruction of water-table depth indicates dry early nineteenth-century conditions, wet conditions in the late 19th to early twentieth centuries, followed by progressive drying for much of the twentieth-century. Testate amoeba composition appears to have been sensitive to severe drought in recent decades. The results signal that assemblages of testate amoebae and Cladocera are useful proxies of Hawaiian peatland paleohydrology and should be considered alongside other archives of Hawaiian environmental history.

Distribution of testate amoebae in bryophyte communities in São Miguel Island (Azores Archipelago).

BackgroundTestate amoebae are a polyphyletic group of protists living preferentially in soils, freshwaters and wetlands. These Protozoa have a worldwide distribution, but their presence and diversity in the Azores (a remote oceanic archipelago) is poorly known, with only twelve taxa recorded so far. The published information reflects occasional collections from sporadic field visits from naturalists to São Miguel Island, mainly in the nineteenth century. To overcome this limitation, a standardised survey was carried out on the Island, sampling different types of habitats from several localities to provide the distribution and information on species ecology of testate amoebae.New informationIn this study, 43 species of testate amoebae were recorded (within a total of 499 occurrences), belonging to two orders of Protista (26 Arcellinida and 17 Euglyphida). The most frequently occurring testate amoebae were Euglypha strigosa, Trinema lineare, Euglypha rotunda, Assulina muscorum and Cyclopyxis eurystoma. The most diverse genus was Euglypha (six species). A total of 38 species are new records for the Azores Archipelago. These data help to improve knowledge of the geographical distribution of testate amoebae in the northern hemisphere and their diversity in the Azores Archipelago.

Abundance and distribution of testate amoebae bearing siliceous plates in freshwater lakes and ponds along the east coast of North America: Importance of water depth and pH

AbstractTestate amoebae are a highly diverse and polyphyletic group of heterotrophic, free-living amoeboid protists that consist of a single cell enclosed within a shell, or test. These organisms i...

Distribution of Testate Amoebae (Thecamoebians) in a Desiccating Lake, India

Distribution of Testate Amoebae (Thecamoebians) in a Desiccating Lake, India

Profundal Testate Amoebae (Arcellacea) of Lake Superior and Lake Michigan

Abstract Sediment surface death assemblages of recent testate amoebae (Arcellacea) are reported from nine sites in Lake Superior and Lake Michigan. These are the first profundal sediment-water interface samples of testate amoebae described from either of the Great Lakes which provide valuable insight on deep-water, large-lake assemblages. Centropixid strains were present to abundant in shallower, nearshore sites (up to 66 m water depth). Assemblages at depths >40 m were dominated by Difflugia oblonga “tenuis.” The shallowest sample (26 m) was dominated by Centropyxis aculeata “discoides” and Difflugia oblonga “tenuis.” Over 100 tests per sample were observed from >100 m. Density of tests appears to be constrained by lithology rather than water depth. The deepest site (325 m) yielded low foraminiferal abundances. This pilot study provides a first step towards documenting the distribution of testate amoebae in the Great Lakes.

Diversity and distribution of testate amoebae (Amoebozoa, Rhizaria) in reservoirs, Northeastern Bulgaria

Abstract The aim of the study is to describe the testate amoebae fauna in seven reservoirs in the Northeastern Bulgaria and to investigate the relationship of taxonomic diversity and abundance of these organisms to the some characteristics of the reservoirs. A total of 52 species, varieties and forms belonging to 15 genera were identified in the benthal of the coastal zone. There are significant differences in species richness and abundance between the testacea of different reservoirs. Number of taxa was significantly higher in the Beli Lom (29 species and 12 genera) and Loznitsa (22 species and 13 genera). Most of the reservoirs - Kara Michal, Bogdantsi, Isperih, Lipnik and Brestovene have extremely poor fauna compared to other similar reservoirs. This is confirmed by the low values of the Shannon-Weaver diversity index, which varied between 1.04 and 2.396, as well as by the other indices used to assess the environmental conditions in the reservoirs. The data of the regression analysis showed that a relation between age, surface area and water volume of the reservoirs and the species richness and abundance of testacea is not established.

Ecology of peatland testate amoebae in the Alaskan continuous permafrost zone

Arctic peatlands represent a major global carbon store, but rapid warming poses a threat to their long-term stability. Testate amoebae are sensitive hydrological indicators that offer insight into Holocene environmental change in peatlands. However, in contrast to temperate peatlands, there have only been a few studies into the ecology of testate amoebae and their efficacy as environmental indicators in permafrost peatlands. We present the first study of testate amoeba ecology from peatlands in the continuous permafrost zone, based on samples from across the Alaskan North Slope. Multivariate statistical analyses show that pore water electrical conductivity (EC), a proxy for nutrient status along the ombrotrophic-minerotrophic gradient, is the dominant control on testate amoeba distribution. Water-table depth (WTD) is also a significant control on testate amoeba distribution, but is secondary to EC. We present two new testate amoeba-based transfer functions to reconstruct both EC (TFEC) and WTD (TFWTD), the first for peatlands in the continuous permafrost zone. The transfer functions are based on Weighted Averaging Partial Least Squares (WAPLS) regression and were assessed using leave-one-out (LOO) cross-validation. We find that both transfer functions have good predictive power. TFWTD is the best performing model (R2JACK = 0.84, RMSEPJACK = 6.66 cm), but TFEC also performs well (R2JACK = 0.76, RMSEPJACK = 146 μS cm−1). Our findings are similar to those conducted in peatlands in discontinuous permafrost regions. The new transfer functions open the opportunity for reconstructing the Holocene dynamics of peatlands of the continuous permafrost zone in Alaska, which represent rapidly changing ecosystems.

Successional change of testate amoeba assemblages along a space-for-time sequence of peatland development

It is well established that in ombrotrophic bogs, water-table depth (WTD) is the primary environmental control on testate amoeba distribution. However, the environmental controls on testate amoebae in minerotrophic fens are less well known and successional change in their assemblages associated with fen-bog peatland development has been scarcely investigated. Here we investigate a peatland space-for-time sequence resulting from postglacial rebound on the west coast of Finland, to assess successional patterns in testate amoeba communities and their relationships with environmental variables during peatland development. Sample sites along a 10-km transect from coast to inland ranged from a recently emerged wet meadow to a mature bog. Environmental variables (e.g., peat thickness, carbon and nitrogen content, pH, WTD and vegetation) were measured alongside testate amoeba samples. Results showed that even though the distribution of testate amoebae was to some extent determined by the succession stage, many taxa had wide WTD and pH ranges. The primary environmental control for many taxa changed along the succession. In conclusion, the ecological constraints on testate amoebae in minerotrophic systems are more complex than in bogs. The detected patterns also complicate the use of testate amoebae as a primary proxy in palaeoecological reconstructions where fen-to-bog shifts occur.

Ecological drivers of testate amoeba diversity in tropical water bodies of central Mexico

Testate amoebae are unicellular organisms characterized by a shell-like test. Due to their potential use as bioindicators (and paleoindicators), these organisms have been increasingly studied in the last decade, particularly in temperate latitudes. This study’s objective was two-fold: to identify the testate amoeba communities sampled from 29 water bodies in Mexico and to determine if their presence and distribution also made them suitable bioindicators for tropical latitudes. A total of 40 taxa were recorded within 12 genera, and six significant variables—oxygen, pH, depth, temperature, conductivity, and total alkalinity—that explained testate amoeba distribution within and among the water bodies were identified through a canonical correspondence analysis. The Q-mode clusters rendered five assemblages, each named after their respective dominant species: 1) Centropyxis aculeata strain “aculeata” assemblage, 2) Difflugia oblonga strain “bryophila” assemblage, 3) Diverse assemblage, 4) Cucurbitella tricuspis assemblage, and 5) Difflugia protaeiformis strain “acuminata” assemblage. We found that Cucurbitella tricuspis and the Difflugia protaeiformis strain “acuminata” have similar ecological preferences to those reported previously for temperate lakes, with the former identified as an indicator of eutrophic environments and the latter as an indicator of low oxygen levels. On the other hand, Centropyxis aculeata strain “aculeata” and Arcella vulgaris seem to indicate adverse conditions, but the source of this environmental stress apparently differs from that reported in temperate latitudes. Although this stress source could not be identified in all cases, our study nonetheless demonstrates that testate amoebae in the water bodies of central Mexico could reveal the presence of environmental stress.

Testate amoeba as palaeohydrological indicators in the permafrost peatlands of north‐east European Russia and Finnish Lapland

ABSTRACTTo explore the use of testate amoeba for investigating the impacts of climate change on permafrost peatland hydrology, we established a new modern training set from Arctic permafrost peatlands in north‐east European Russia and Finnish Lapland. Ordination analyses showed that water‐table depth (WTD) was the most important control on testate amoeba distribution. We developed a new testate amoeba‐based WTD transfer function and thoroughly tested it. We found that our transfer function had strong predictive power. The best‐performing model was based on tolerance‐downweighted weighted averaging with inverse deshrinking (R2 = 0.77, RMSEP = 5.62 cm with leave‐one‐out cross validation). The new transfer function was applied to a short peat core from Arctic Russia and revealed two major hydrological shifts, which could be validated against plant macrofossil data. We also compared our model to another two models from more temperate peatlands. Comparison of the different testate amoeba datasets suggests that testate amoeba ecohydrological relationships are similar for permafrost peatlands to those in more temperate regions, but there are some differences that suggest a need for training datasets that are fully representative of permafrost peatlands.

Diversity and community patterns of testate amoebae in Bau Sen and Bau Trang lakes in Binh Thuan Province, Vietnam

The species composition and distribution of testate amoebae in Bau Sen and Bau Trang lakes (Binh Thuan Province, Vietnam) were investigated. Fifty-three species, varieties and forms have been identified from the water column and sediments. Twenty-seven species, varieties and forms from the genera Arcella, Centropyxis, Cyclopyxis, Difflugia and Pyxidicula were found in Vietnam for the first time. The updated list of testate amoebae in Vietnam now includes 286 taxa. The genera Arcella, Centropyxis and Difflugia are characterized by the highest frequency of occurrence. The species diversity of Arcella, Centropyxis, Difflugia was the highest. Centropyxis aculeata, Arcella discoides, Difflugia schurmanni, Netzelia oviformis and Difflugia limnetica were the most common species. Many species have shown restricted distribution, some species have been found only in one lake and not been found in another lake. The number of observed species, varieties, and forms in each lake is 34. The average number of the species per sample on the shores of the lakes subjected to human agricultural activity was significantly higher than in the samples from the shores of the lakes with less anthropogenic disturbance. The curves of “cumulative species number vs. sampling effort” are well fitted by equations S = 7.60 N 0.69 for Bau Sen lake and S = 12.52 N 0.46 for Bau Trang. The curves are unsaturated, which indicates that more intensive investigations of testate amoebae should be expected to reveal more species.

Ecology of testate amoebae (Protists) in a Sphagnum-dominated peat bog and the relationship between species assemblages and environmental parameters

Abstract Despite its ecological importance, little information is available regarding spatial and seasonal changes in the testate amoebae community in peat bogs. The objectives of this study were to examine the structure of communities and horizontal distribution of testate amoebae fauna, to improve the understanding of factors affecting the distribution of moss testate amoebae communities and to analyze the seasonal changes in testate amoebae communities in a Sphagnum-dominated peat bog (eastern Poland). A total of 45 testate amoebae species were identified in the samples. The highest species richness occurred in hollows dominated by Sphagnum angustifollum, much lower numbers of taxa were observed in hummocks dominated by Sphagnum magellanicum and Polytrichum. The Monte Carlo permutation test showed the significance of Ntot, temperature, pH, and the depth to the water table for the variability of testate amoebae in all microhabitats. Species found in spring samples were associated with the increased Ntot content. Species occurring in summer samples were associated with the increasing pH gradient and species developing in late spring and autumn preferred a greater depth to the water table.

Checklist, diversity and distribution of testate amoebae in Chile

Bringing together more than 170 years of data, this study represents the first attempt to construct a species checklist and analyze the diversity and distribution of testate amoebae in Chile, a country that encompasses the southwestern region of South America, countless islands and part of the Antarctic. In Chile, known diversity includes 416 testate amoeba taxa (64 genera, 352 infrageneric taxa), 24 of which are here reported for the first time. Species−accumulation plots show that in Chile, the number of testate amoeba species reported has been continually increasing since the mid-19th century without leveling off. Testate amoebae have been recorded in 37 different habitats, though they are more diverse in peatlands and rainforest soils. Only 11% of species are widespread in continental Chile, while the remaining 89% of the species exhibit medium or short latitudinal distribution ranges. Also, species composition of insular Chile and the Chilean Antarctic territory is a depauperated subset of that found in continental Chile. Nearly, the 10% of the species reported here are endemic to Chile and many of them are distributed only within the so-called Chilean biodiversity hotspot (ca. 25° S-47° S). These findings are here thoroughly discussed in a biogeographical and evolutionary context.

The ecological peculiarities of the testate amoebae population in the Middle Ob flood plain

The biodiversity and distribution of testate amoebae in the Middle Ob flood plain soils have been studied. The biodiversity of Testacea in the soils consists of 83 species and varieties from 12 families. The population of Testacea in flood plain habitats is rich in water forms, especially in the flood plain part of the catena, because of annual floods. The study showed that the density of Testacea in the forest plots is approximately 10 times higher than in the meadow ones. The species diversity of Testacea in the meadows of the flood plain includes 40 species and varieties. It was found that there is an enrichment of the fauna of Testacea in the flood plain meadows with water forms and a decrease in the population of Testacea in the soil according to the depth. The decrease in the diversity and number down the soil profile is related to the decrease in the amount of the oxygen available and general induration of soil. On the whole, the population composition of Testacea in the soils of the pine forest consists of typical representatives of humus substrates with low values of pH, small stock of humus and mineral nutrition. The soils of mature pine forests are rich in Testacea; they have a similar complex of morphological types, mainly because of the moss cover and forest litter thickness.

Evaluating the use of testate amoebae for palaeohydrological reconstruction in permafrost peatlands

The melting of high-latitude permafrost peatlands is a major concern due to a potential positive feedback on global climate change. We examine the ecology of testate amoebae in permafrost peatlands, based on sites in Sweden (~ 200 km north of the Arctic Circle). Multivariate statistical analysis confirms that water-table depth and moisture content are the dominant controls on the distribution of testate amoebae, corroborating the results from studies in mid-latitude peatlands. We present a new testate amoeba-based water table transfer function and thoroughly test it for the effects of spatial autocorrelation, clustered sampling design and uneven sampling gradients. We find that the transfer function has good predictive power; the best-performing model is based on tolerance-downweighted weighted averaging with inverse deshrinking (performance statistics with leave-one-out cross validation: R2 = 0.87, RMSEP = 5.25 cm). The new transfer function was applied to a short core from Stordalen mire, and reveals a major shift in peatland ecohydrology coincident with the onset of the Little Ice Age (c. AD 1400). We also applied the model to an independent contemporary dataset from Stordalen and find that it outperforms predictions based on other published transfer functions. The new transfer function will enable palaeohydrological reconstruction from permafrost peatlands in Northern Europe, thereby permitting greatly improved understanding of the long-term ecohydrological dynamics of these important carbon stores as well as their responses to recent climate change.

Local factors affecting the testate amoeba community (Protozoa: Arcellinida; Euglyphida) in a neotropical floodplain

The objective of this study was to evaluate the possible influential factors on the patterns of temporal distribution of testate amoebae (Protozoa: Arcellinida and Euglyphida) in plankton environments connected to a main river in a Neotropical floodplain. In this context, we hypothesised that the local factors would be the main structural factors for the testate amoebae. Samplings during two hydrological periods were conducted along a longitudinal axis of three environments for aquatic macrophytes, at the edge of the banks. The highest mean values of the richness, diversity and density were recorded for the high water period. Our results suggested that local factors influence the distribution of testate amoebae. These environments were significantly affected by the hydrological regime, where the main structural factors for testate amoebae were the environmental variables, supporting the predicted hypothesis.

Diversity and distribution of freshwater testate amoebae (protozoa) along latitudinal and trophic gradients in China.

Freshwater microbial diversity is subject to multiple stressors in the Anthropocene epoch. However, the effects of climate changes and human activities on freshwater protozoa remain poorly understood. In this study, the diversity and distribution of testate amoebae from the surface sediments were investigated in 51 Chinese lakes and reservoirs along two gradients, latitude and trophic status. A total of 169 taxa belonging to 24 genera were identified, and the most diverse and dominant genera were Difflugia (78 taxa), Centropyxis (26 taxa) and Arcella (12 taxa). Our analysis revealed that biomass of testate amoebae decreased significantly along the latitudinal gradient, while Shannon-Wiener indices and species richness presented an opposite trend (P < 0.05). The relationship of diversity and latitude is, we suspect, an artifact of the altitudinal distribution of our sites. Furthermore, biomass-based Shannon-Wiener index and species richness of testate amoebae were significantly unimodally related to trophic status (P < 0.05). This is the first large-scale study showing the effects of latitude and trophic status on diversity and distribution of testate amoebae in China. Therefore, our results provide valuable baseline data on testate amoebae and contribute to lake management and our understanding of the large-scale global patterns in microorganism diversity.Electronic supplementary materialThe online version of this article (doi:10.1007/s00248-014-0442-1) contains supplementary material, which is available to authorized users.