Deep-sea Cores Research Articles

Implications for the conservation of deep-water corals in the face of multiple stressors: A case study from the New Zealand region

The waters around New Zealand are a global hotspot of biodiversity for deep-water corals; approximately one sixth of the known deep-water coral species of the world have been recorded in the region. Deep-water corals are vulnerable to climate-related stressors and from the damaging effects of commercial fisheries. Current protection measures do not account for the vulnerability of deep-water corals to future climatic conditions, which are predicted to alter the distribution of suitable habitat for them. Using recently developed habitat suitability models for 12 taxa of deep-water corals fitted to current and future seafloor environmental conditions (under different future climatic conditions: SSP2 – 4.5 and SSP3 – 7.0) we explore possible levels of spatial protection using the decision-support tool Zonation. Specifically, we assess the impact of bottom trawling on predictions of current distributions of deep-water corals, and then assess the effectiveness of possible protection for deep-water corals, while accounting for habitat refugia under future climatic conditions. The cumulative impact of bottom trawling was predicted to impact all taxa, but particularly the reef-forming corals. Core areas of suitable habitat were predicted to decrease under future climatic conditions for many taxa. We found that designing protection using current day predictions alone, having accounted for the impacts of historic fishing impacts, was unlikely to provide adequate conservation for deep water-corals under future climate change. Accounting for future distributions in spatial planning identified areas which may provide climate refugia whilst still providing efficient protection for current distributions. These gains in conservation value may be particularly important given the predicted reduction in suitable habitat for deep-water corals due to bottom fishing and climate change. Finally, the possible impact that protection measures may have on deep-water fisheries was assessed using a measure of current fishing value (kg km−2 fish) and future fishing value (predicted under future climate change scenarios).

Developmental history of a newly discovered chain of paired mound and depression structures on the southwestern continental shelf of the Ulleung Basin, East Sea, Korea

A chain of paired mound and depression structures are presented in the southwestern continental shelf of the Ulleung Basin, East Sea, Korea. We integrate multibeam bathymetry to identify topographic features, sub-bottom profile and multi-channel seismic reflection data to confirm geological features, and piston cores to understand the sediments of the mounds and depressions. Paired structures occur with a northwest–southeast orientation at water depths between 130 and 150 m and have similar scales of 10–20 m in height and depth. The mounds consist of cold-water corals and authigenic carbonate with shelly sand, whereas, the surficial lithology of depressions are only composed of siliciclastic deposits. The mounds appeared to have grown from the depression based on the observation for morphological features in the cross-section profiles of the paired mound and depression structures. Seismic profiles show acoustic blanking anomalies and seismic chimneys, indicating that the topographic relief formed under the influence of gas seepage. The petrological and geochemical signature of carbonate chunks also displayed gas leak effects different from CWC. This study suggests a developmental history model with paired mound and depression structures, in which gas/fluid escape causes depressions and the selective coral growth creates mounds growing on one side of these depressions. The mounds had sufficiently grown, depressions would have been further developed in interaction with the bottom current.

Extreme glacial cooling likely led to hominin depopulation of Europe in the Early Pleistocene.

The oldest known hominin remains in Europe [~1.5 to ~1.1 million years ago (Ma)] have been recovered from Iberia, where paleoenvironmental reconstructions have indicated warm and wet interglacials and mild glacials, supporting the view that once established, hominin populations persisted continuously. We report analyses of marine and terrestrial proxies from a deep-sea core on the Portugese margin that show the presence of pronounced millennial-scale climate variability during a glacial period ~1.154 to ~1.123 Ma, culminating in a terminal stadial cooling comparable to the most extreme events of the last 400,000 years. Climate envelope-model simulations reveal a drastic decrease in early hominin habitat suitability around the Mediterranean during the terminal stadial. We suggest that these extreme conditions led to the depopulation of Europe, perhaps lasting for several successive glacial-interglacial cycles.

Functional gene composition and metabolic potential of deep-sea coral-associated microbial communities

Over the past decade, an abundance of 16S rRNA gene surveys have provided microbiologists with data regarding the prokaryotes present in a coral-associated microbial community. Functional gene studies that provide information regarding what those microbes might do are fewer, particularly for non-tropical corals. Using the GeoChip 5.0S microarray, we present a functional gene study of microbiomes from five species of cold-water corals collected from depths of 296–1567 m. These species included two octocorals, Acanthogorgia aspera and Acanthogorgia spissa, and three stony corals: Desmophyllum dianthus, Desmophyllum pertusum (formerly Lophelia pertusa), and Enallopsammia profunda. A total of 24,281 gene sequences (representing different microbial taxa) encoding for 383 functional gene families and representing 9 metabolic gene categories were identified. Gene categories included metabolism of carbon, nitrogen, phosphorus, and sulfur, as well as virulence, organic remediation, metal homeostasis, secondary metabolism and phylogeny. We found that microbiomes from Acanthogorgia spp. were the most functionally distinct but also least diverse compared against those from stony corals. Desmophyllum spp. microbiomes were more similar to each other than to E. profunda. Of 383 total gene families detected in this study, less than 20% were significantly different among these deep-water coral species. Similarly, out of 59 metabolic sub-categories for which we were able to make a direct comparison to microbiomes of tropical corals, only 7 were notably different: anaerobic ammonium oxidation (anammox), chitin degradation, and dimethylsulfoniopropionate (DMSP) degradation, all of which had higher representations in deep-water corals; and chromium homeostasis/resistance, copper homeostasis/resistance, antibiotic resistance, and methanogenesis, all of which had higher representation in tropical corals. This implies a broad-scale convergence of the microbial functional genes present within the coral holobiont, independent of coral species, depth, symbiont status, and morphology.

Underwater surveys reveal deep-sea corals in newly explored regions of the southwest Atlantic

Deep-sea coral distribution and composition are unknown in much of the global ocean, but repurposing ocean industry surveys can fill that gap. In Santos Basin, southeast Brazil, areas (241–963 m depth) were surveyed during seven Petrobras cruises, mapping bottom topography with multibeam sonar, then collecting video with remotely operated vehicles. Here, we defined deep-sea coral species distribution and richness, using these surveys, correlating them to physical oceanographic properties. Solenosmilia variabilis was the most prevalent colonial species in coral mounds. Overall, 67% of species were Octocorallia. Coral assemblage structure, abundance, and richness varied among sites both within and among depths, with higher density and richness in the northernmost Santos basin. Depth was the strongest predictor for scleractinian coral distribution, with depth ranges varying by species. Assemblage differences corresponded to changes in water mass. Desmophyllum pertusum was more abundant in South Atlantic Central Water and S. variabilis in Antarctic Intermediate Water influenced areas.

Climate Induced Thermocline Aging and Ventilation in the Eastern Atlantic Over the Last 32,000 Years

AbstractThe radiocarbon analysis of uranium‐thorium‐dated cold‐water corals (CWCs) provides an excellent opportunity for qualitative reconstruction of past ocean circulation and water mass aging. While mid‐depth water mass aging has been studied in the Atlantic Ocean, the evolution of the thermocline is still largely unknown. Here we present a combined 14C and 230Th/U age record obtained from thermocline dwelling CWCs at various sites in the eastern Atlantic Ocean, with intermittently centennial resolution over the last 32 ka. Shallow dwelling CWCs off Angola, located in the South Atlantic, infer a link between the mid‐depth equatorial Atlantic and Southern Ocean. They confirm a 14C drawdown during the Last Glacial Maximum (LGM) and advocate for a consistent Southern Hemisphere radiocarbon aging of upper thermocline waters, as well as strong depth gradients and high variability. Direct comparison with 14C simulations carried out with an Ocean General Circulation Model yield good agreement for Angola. In contrast, the North Atlantic thermocline shows well‐ventilated water with strong variations near the position of today's Azores Front (AF), neither of which are captured by the model. During the Bølling‐Allerød, we confirm the important role of the AF in separating North and South Atlantic thermocline waters and provide further evidence of a 500 year long deep convection interruption within the Younger Dryas (YD). We conclude that the North and South Atlantic thermocline waters were separately acting carbon reservoirs during the LGM and subsequent deglaciation until the modern circulation was established during the YD.

The cold-water coral province of the eastern Ligurian Sea (NW Mediterranean Sea): historical and novel evidences

Several bathyal cold-water coral provinces, characterized by a lush growth of habitat-forming scleractinians, have been recognized in the Mediterranean Sea. However, the search for this biogenic habitat only marginally targeted the Italian coast of the Ligurian Sea (NW Mediterranean basin) despite historical and a few recent local studies in the region reporting the presence of corals. This study used bathymetry maps, side-scan sonar profiles, historical charts, and trawling routes to identify sites that could potentially host coral habitats in the eastern sector of the Ligurian Sea. Remotely operated vehicle video footage from various projects (2015-2021, 20 dives) was then used to characterize four sub-areas (Genoa Plateau, Portofino, Deiva Marina, and Monterosso) where corals were detected between 450 m and 750 m depth. Radiocarbon dating was used to trace back the geological history of the coral structures. A small coral mound, impacted by trawling activities, was found on the Genoa Plateau, while four massive coral structures were found in the other sub-areas, mainly located in a morphologically complex and highly energetic canyon region. High levels of megafaunal biodiversity, including rarely reported alcyonaceans as Placogorgia coronata, were observed together with moderate fishing impact. Overall, the identified coral areas potentially account for 9 km2 of both subfossil mounds (as old as 13300 years BP), dominated by Desmophyllum pertusum, and living reefs, dominated by Madrepora oculata, the latter representing up to 23% of the substrate coverage. The few living colonies of D. pertusum in the area represent the first documented records for the Ligurian Sea. These data support the presence of a distinct eastern Ligurian cold-water coral province.

Ontogenetic differences in the response of the cold-water coral Caryophyllia huinayensis to ocean acidification, warming and food availability

Cold-water corals (CWCs) are considered vulnerable to environmental changes. However, previous studies have focused on adult CWCs and mainly investigated the short-term effects of single stressors. So far, the effects of environmental changes on different CWC life stages are unknown, both for single and multiple stressors and over long time periods. Therefore, we conducted a six-month aquarium experiment with three life stages of Caryophyllia huinayensis to study their physiological response (survival, somatic growth, calcification and respiration) to the interactive effects of aragonite saturation (0.8 and 2.5), temperature (11 and 15 °C) and food availability (8 and 87 μg C L−1). The response clearly differed between life stages and measured traits. Elevated temperature and reduced feeding had the greatest effects, pushing the corals to their physiological limits. Highest mortality was observed in adult corals, while calcification rates decreased the most in juveniles. We observed a three-month delay in response, presumably because energy reserves declined, suggesting that short-term experiments overestimate coral resilience. Elevated summer temperatures and reduced food supply are likely to have the greatest impact on live CWCs in the future, leading to reduced coral growth and population shifts due to delayed juvenile maturation and high adult mortality.

Cold-water coral diversity along the continental shelf margin of northwestern South China Sea

Scleractinian cold-water corals (CWCs) are one of the most important habitat engineers of the deep sea. Although the South China Sea (SCS) abuts the biodiversity center of scleractinian CWCs in the western Pacific, only a few sporadic records are available. We discovered new CWC sites by means of trawl sampling and video observation along the continental shelf of the northwestern SCS. All trawled scleractinian CWC specimens were identified to species level according to skeleton morphology and structure. The living CWCs and associated fauna recorded in the video were -identified to a higher level of classification. Scleractinian corals were identified to genus level, while non-scleractinian CWCs were identified to family level and given general names such as gorgonian corals, bamboo corals and black corals. Associated benthic dwellers were divided into major categories. A total of 28 scleractinian CWC species were identified to 7 families, 15 genera, and 1 additional subgenus. Among them, 13 species were colonial, including important habitat-forming species in the genera Eguchipsammia, Dendrophyllia and Cladopsammia. Non-scleractinian CWCs were identified to 7 families, including 4 families gorgonian corals, 1 family bamboo corals, and 2 families black corals. Gorgonian corals were the most abundant non-scleractinian CWCs in this region. Meanwhile, starfish, sea anemones, fish, gastropods, echinoderms, and other associated benthic fauna were recorded in the CWC habitats, with starfish belonging to the order Brisingida being most common. New scleractinian CWC assemblages were discovered along the continental seabed mounds in the northwestern SCS. This study highlights the remarkable diversity of cold-water scleractinian corals in the whole SCS, and shows the potential widespread distribution and conservation prospect of CWC habitats in this region.

A data science approach for multi-sensor marine observatory data monitoring cold water corals (Paragorgia arborea) in two campaigns.

Fixed underwater observatories (FUO), equipped with digital cameras and other sensors, become more commonly used to record different kinds of time series data for marine habitat monitoring. With increasing numbers of campaigns, numbers of sensors and campaign time, the volume and heterogeneity of the data, ranging from simple temperature time series to series of HD images or video call for new data science approaches to analyze the data. While some works have been published on the analysis of data from one campaign, we address the problem of analyzing time series data from two consecutive monitoring campaigns (starting late 2017 and late 2018) in the same habitat. While the data from campaigns in two separate years provide an interesting basis for marine biology research, it also presents new data science challenges, like the the marine image analysis in data form more than one campaign. In this paper, we analyze the polyp activity of two Paragorgia arborea cold water coral (CWC) colonies using FUO data collected from November 2017 to June 2018 and from December 2018 to April 2019. We successfully apply convolutional neural networks (CNN) for the segmentation and classification of the coral and the polyp activities. The result polyp activity data alone showed interesting temporal patterns with differences and similarities between the two time periods. A one month "sleeping" period in spring with almost no activity was observed in both coral colonies, but with a shift of approximately one month. A time series prediction experiment allowed us to predict the polyp activity from the non-image sensor data using recurrent neural networks (RNN). The results pave a way to a new multi-sensor monitoring strategy for Paragorgia arborea behaviour.

Variable ventilation ages in the equatorial Indian Ocean thermocline during the LGM

Variations of atmospheric CO2 during the Pleistocene ice-ages have been associated with changes in the drawdown of carbon into the deep-sea. Modelling studies suggest that about one third of the glacial carbon drawdown may not be associated to the deep ocean, but to the thermocline or intermediate ocean. However, the carbon storage capacity of thermocline waters is still poorly constrained. Here we present paired 230Th/U and 14C measurements on scleractinian cold-water corals retrieved from ~ 450 m water depth off the Maldives in the Indian Ocean. Based on these measurements we calculate ∆14C, ∆∆14C and Benthic-Atmosphere (Batm) ages in order to understand the ventilation dynamics of the equatorial Indian Ocean thermocline during the Last Glacial Maximum (LGM). Our results demonstrate a radiocarbon depleted thermocline as low as -250 to -345‰ (∆∆14C), corresponding to ~ 500–2100 years (Batm) old waters at the LGM compared to ~ 380 years today. More broadly, we show that thermocline ventilation ages are one order of magnitude more variable than previously thought. Such a radiocarbon depleted thermocline can at least partly be explained by variable abyssal upwelling of deep-water masses with elevated respired carbon concentrations. Our results therefore have implications for radiocarbon-only based age models and imply that upper thermocline waters as shallow as 400 m depth can also contribute to some of the glacial carbon drawdown.

Recovery and restoration potential of cold‐water corals: experience from a deep‐sea marine protected area

Cold‐water corals (CWCs) are important species that provide habitat for other taxa but are sensitive to mechanical damage from bottom trawling. CWC conservation has been implemented in the form of marine protected areas (MPAs), but recovery from impact may be particularly slow in the deep‐sea environment; consequently, the use of restoration techniques has been considered. To gain some insight into CWC recruitment and growth, in 2011 we deployed small seabed moorings in the Darwin Mounds MPA (~1,000 m water depth). This site hosts hundreds of CWC mounds, that had previously (until 2003) been impacted by deep‐water trawling. In 2019, we carried out in situ visual surveys of these moorings and the surrounding seabed environment, then recovered two of the moorings. The mooring buoys, glass floats with plastic covers, were extensively colonized by a diverse epifauna that included the CWCs Desmophyllum pertusum and D. dianthus. The presence of coral recruits indicated that environmental conditions, and larval supply, remained favorable for the settlement and growth of CWCs within the MPA. Based on our observations, we consider four possible restoration methods, together with a “do‐nothing” option, for the Darwin Mounds CWCs that have shown little, if any, natural recovery despite 16 years of protection. We conclude that seabed emplacement of high‐relief artificial substrata is likely to be the most efficient and cost‐efficient means of promoting enhanced recovery of the CWCs.

Growth rate estimation by 210Pb chronology in precious corals collected off the southern coast of Japan

The Lead 210 (210Pb) concentrations were determined to estimate the skeletal growth rates in the four species of precious corals including Japanese red coral (Corallium japonicum), pink coral (Pleurocorallium elatius), white coral (P. konojoi), and a deep-sea coral (Coralliidae sp.), and in a bamboo coral (Keratoisis sp.). Colonies were collected from the southern coast of Japan, western North Pacific margin. The 210Pb concentrations typically showed the exponential decrease with distance from the edge to the center of the skeleton axis in a cross section of main stem of colonies. The mean radial growth rates for colonies were estimated from the slopes of the best fit curves for exponential decrease in 210Pb concentration along the multiple transects. The obtained mean and standard deviation of radial growth rates in the diameter (the number of transects, n) for three colonies of C. japonicum were 0.31 mm/y (n = 1), 0.21 ± 0.05 mm/y (n = 2), and 0.36 ± 0.13 mm/y (n = 2), respectively, which were broadly comparable to the previously reported growth rates obtained by growth ring counting. Those obtained for three white coral colonies were 0.52 mm/y (n = 1), 0.60 mm/y (n = 1), and 0.36 ± 0.25 mm/y (n = 2). The radial growth rate for the bamboo coral colony was 0.13 mm/y in radius. The linear growth of the main steam of some colonies was analyzed from several cross sections. The linear growth rates of colonies could be estimated from the slope of the best fit curve (1) for increasing mean 210Pb concentration along the cross transects of the axis and (2) for increasing center 210Pb concentration of the skeleton axis. The linear growth rates calculated from the mean and center concentrations for two C. japonicum colonies were 8.5 and 6.1 mm/y, and 1.8 and 1.4 mm/y, respectively. Those for a P. elatius colony were 4.7 and 3.4 mm/y. The difference between the two estimates may reflect the morphological structure of the skeleton. The growth rates measured for the radial increase and linear extension of the main stem of the colonies could provide basic information for the demographic study of these coral species thereby fostering a rational exploitation of their populations.

Radiocarbon evidence for the stability of polar ocean overturning during the Holocene

Proxy-based studies have linked the pre-industrial atmospheric p_{{rm{CO}}_{2}} rise of ∼20 ppmv in the mid- to late Holocene to an inferred increase in the Southern Ocean overturning and associated biogeochemical changes. However, the history of polar ocean overturning and ventilation through the Holocene remains poorly constrained, leaving important gaps in the assessment of the feedbacks between changes in ocean circulation and the carbon cycle in a warm climate state. The deep-ocean radiocarbon content, which provides a measure of ventilation, responds to circulation changes on centennial to millennial time scales. Here we present absolutely dated deep-sea coral radiocarbon records from the Drake Passage, between South America and Antarctica, and Reykjanes Ridge, south of Iceland, over the Holocene. Our data suggest that ventilation in the Antarctic circumpolar waters and North Atlantic Deep Water is surprisingly invariant within proxy uncertainties at our sampling resolution. Our findings indicate that long-term, large-scale polar ocean overturning has not been disturbed to a level resolvable by radiocarbon and is probably not responsible for the millennial atmosphere p_{{rm{CO}}_{2}} evolution through the Holocene. Instead, continuous nutrient and carbon redistribution within the water column following deglaciation, as well as changes in land organic carbon stock, might have regulated atmospheric CO2 budget during this period.

Adaptive mechanisms of the deep-sea coral Polymyces wellsi (Flabellidae, Scleractinia) illuminate strategies for global climate change

An oxygen minimum zone (OMZ) typically occurs in the tropical western Pacific and is characterized by an unfavorably low pH, a rather low oxygen content and extreme food limitation. Understanding how deep-sea corals survive in these challenging conditions, especially how calcification occurs at depths near the aragonite saturation horizon, is anticipated to provide a strategy for stony corals to address global climate change. In this study, we collected the deep-sea solitary coral Polymyces wellsi living in the OMZ of the Caroline Ridge and analyzed its mitochondrial genome and transcriptome. Phylogenetic analysis based on mitochondrial genomes suggested that the solitary character and the deep-sea adaptations evolved at least three times in Scleractinia. In comparison to the transcriptomes of shallow-water counterparts, the genetic elements related to biomineralization, mitochondrial components, and ciliary motion underwent positive selection and expansion in P. wellsi, which suggested their significance in facilitating the adaptations to the stressors of low pH, insufficient oxygen content, scarce food resources, or the combined effects of these stressors within the OMZ. An interesting finding of this study was that the positively selected amino acids in P. wellsi increased the isoelectric points of its skeleton organic matrix proteins, which suggested a novel bio-indicator that may reflect the adaptive capacity to the external acidified seawater. Overall, this study not only provides insights into the adaptive mechanisms of deep-sea solitary corals but also illuminates strategies for global climate change.

Trophic ecology of Angolan cold-water coral reefs (SE Atlantic) based on stable isotope analyses

Cold-water coral (CWC) reefs of the Angolan margin (SE Atlantic) are dominated by Desmophyllum pertusum and support a diverse community of associated fauna, despite hypoxic conditions. In this study, we use carbon and nitrogen stable isotope analyses (δ13C and δ15N) to decipher the trophic network of this relatively unknown CWC province. Although fresh phytodetritus is available to the reef, δ15N signatures indicate that CWCs (12.90 ± 1.00 ‰) sit two trophic levels above Suspended Particulate Organic Matter (SPOM) (4.23 ± 1.64 ‰) suggesting that CWCs are highly reliant on an intermediate food source, which may be zooplankton. Echinoderms and the polychaete Eunice norvegica occupy the same trophic guild, with high δ13C signatures (-14.00 ± 1.08 ‰) pointing to a predatory feeding behavior on CWCs and sponges, although detrital feeding on 13C enriched particles might also be important for this group. Sponges presented the highest δ15N values (20.20 ± 1.87 ‰), which could be due to the role of the sponge holobiont and bacterial food in driving intense nitrogen cycling processes in sponges’ tissue, helping to cope with the hypoxic conditions of the reef. Our study provides first insights to understand trophic interactions of CWC reefs under low-oxygen conditions.

Oxepine-containing pyrazinopyrimidine alkaloids and quinolinone derivatives produced by Aspergillus versicolor AS-212, a deep-sea-derived endozoic fungus

Four new oxepine-containing pyrazinopyrimidine alkaloids, versicoxepines A − D (1–4), two quinolinone alkaloid analogs including 3-hydroxy-6-methoxy-4-phenylquinolin-2(1H)-one (5) and 3-methoxy-6-hydroxy-4-phenylquinolin-2(1H)-one (6) which were new naturally occurring compounds, together with two known compounds (7 and 8) were isolated from Aspergillus versicolor AS-212, an endozoic fungus isolated from the deep-sea coral Hemicorallium cf. imperiale, which was collected from the Magellan Seamounts in the Western Pacific Ocean. Their structures were determined by extensive analysis of the spectroscopic and X-ray crystallographic data as well as by chiral HPLC analysis, ECD calculation, and DP4+ probability prediction. Structurally, versicoxepines B and C (2 and 3) represent the first example of a new oxepine-containing pyrazinopyrimidine alkaloid whose cyclic dipeptide moiety is composed of the same type of amino acid (Val or Ile). Compound 5 displayed antibacterial activity against aquatic pathogens, Vibrio harveyi and V. alginolyticus, with MICs of 8 μg/mL.

Coral Lipidome: Molecular Species of Phospholipids, Glycolipids, Betaine Lipids, and Sphingophosphonolipids.

Coral reefs are the most biodiversity-rich ecosystems in the world's oceans. Coral establishes complex interactions with various microorganisms that constitute an important part of the coral holobiont. The best-known coral endosymbionts are Symbiodiniaceae dinoflagellates. Each member of the coral microbiome contributes to its total lipidome, which integrates many molecular species. The present study summarizes available information on the molecular species of the plasma membrane lipids of the coral host and its dinoflagellates (phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylserine (PS), phosphatidylinositol (PI), ceramideaminoethylphosphonate, and diacylglyceryl-3-O-carboxyhydroxymethylcholine), and the thylakoid membrane lipids of dinoflagellates (phosphatidylglycerol (PG) and glycolipids). Alkyl chains of PC and PE molecular species differ between tropical and cold-water coral species, and features of their acyl chains depend on the coral's taxonomic position. PS and PI structural features are associated with the presence of an exoskeleton in the corals. The dinoflagellate thermosensitivity affects the profiles of PG and glycolipid molecular species, which can be modified by the coral host. Coral microbiome members, such as bacteria and fungi, can also be the source of the alkyl and acyl chains of coral membrane lipids. The lipidomics approach, providing broader and more detailed information about coral lipid composition, opens up new opportunities in the study of biochemistry and ecology of corals.

On the paradox of thriving cold-water coral reefs in the food-limited deep sea.

The deep sea is amongst the most food-limited habitats on Earth, as only a small fraction (<4%) of the surface primary production is exported below 200 m water depth. Here, cold-water coral (CWC) reefs form oases of life: their biodiversity compares with tropical coral reefs, their biomass and metabolic activity exceed other deep-sea ecosystems by far. We critically assess the paradox of thriving CWC reefs in the food-limited deep sea, by reviewing the literature and open-access data on CWC habitats. This review shows firstly that CWCs typically occur in areas where the food supply is not constantly low, but undergoes pronounced temporal variation. High currents, downwelling and/or vertically migrating zooplankton temporally boost the export of surface organic matter to the seabed, creating 'feast' conditions, interspersed with 'famine' periods during the non-productive season. Secondly, CWCs, particularly the most common reef-builder Desmophyllum pertusum (formerly known as Lophelia pertusa), are well adapted to these fluctuations in food availability. Laboratory and in situ measurements revealed their dietary flexibility, tissue reserves, and temporal variation in growth and energy allocation. Thirdly, the high structural and functional diversity of CWC reefs increases resource retention: acting as giant filters and sustaining complex food webs with diverse recycling pathways, the reefs optimise resource gains over losses. Anthropogenic pressures, including climate change and ocean acidification, threaten this fragile equilibrium through decreased resource supply, increased energy costs, and dissolution of the calcium-carbonate reef framework. Based on this review, we suggest additional criteria to judge the health of CWC reefs and their chance to persist in the future.

The Heliconoides Modified Dissolution Index-HMDI: Do methane seepage environments affect the preservation state of Heliconoides inflatus?

Pteropods are holoplanktonic molluscs presently endangered because their fragile aragonitic shell is very sensitive to ocean acidification. The preservation of pteropods, and in particular of the mesopelagic Heliconoides (Limacina) inflatus, has been used to assess aragonite saturation state in Quaternary sediments (Limacina Dissolution Index, LDX) as an inferred proxy for climatic changes.Three deep-sea cores retrieved in 2016 during the EUROFLEETS2 SEMSEEP cruise offshore Israel are investigated to assess the preservation degree of H. inflatus (d'Orbigny, 1835) in representative environments across the base of the southeastern Mediterranean margin (cold water coral, active seepage pockmark and deep sea channel areas). In some core intervals, yellowish, recrystallized internal molds of this species are present. They have been previously observed in the Eastern Mediterranean, but the nature and origin of their colour was never explained. Scanning Electron Microscopy (SEM), Energy Dispersive Spectroscopy (EDS) and Electron Backscatter Diffraction (EBSD) revealed that the recrystallized molds of the H. inflatus shells are formed by aragonite needles and high-Mg calcite crystals. The formation and preservation of these internal molds is induced by advective methane emissions, typically precipitating aragonite and High-Mg calcite phases close to the sediment–water interface. These molds were never used in previous applications of the LDX or in any existing ranking of pteropod preservation. Therefore, we have categorized these peculiar features combining previous pteropod ranking descriptions with the new observations to develop a modified biotic index (Heliconoides Modified Dissolution Index-HMDI).High values of the HMDI at the base of the pockmark core correspond to the interval where also active seepage-related features – e.g., bubble emissions, low-oxygen benthic foraminifera, chemosymbiotic molluscs, small fragments of authigenic carbonate crusts and slightly depleted δ13C values – occur, showing the applicability of the HMDI to methane seeps environments.