Crown Root Research Articles

Assessing Combining Abilities of Popcorn Inbred Lines for Agronomic and Root Traits under Contrasting Water Conditions: Towards Developing Drought-Tolerant Genotypes

Developing popcorn genotypes that are adapted to water-deficit conditions is crucial due to the significant impact of this abiotic stress on grain yield. This study aimed to assess the combining abilities of preselected popcorn lines for agronomic and root traits under well-watered and water-stressed conditions. A circulating diallel analysis was conducted to investigate the effects of the general and specific combining abilities of 10 lines and their respective hybrids for various traits, including productivity, popping expansion, expanded popcorn volume, 100-grain weight, ear length, ear width, support root angle, crown root angle, number of support roots, number of crown roots, density of support roots, and density of crown roots. Non-additive action genes predominantly influenced the agronomic traits under both water conditions. In contrast, the root traits displayed a greater proportion of additive action gene expression under both conditions, despite being significantly affected by the environment. Lines L61, L71, and L76 demonstrated positive and high effects for general combining ability. The hybrids L65/L76, L71/L76, and L61/L75, in addition to exhibiting satisfactory effects of their specific combining ability, also displayed the most favorable phenotypic responses for most agronomic and root traits, making them ideal candidates for inclusion in popcorn breeding programs aiming to develop drought-tolerant genotypes.

Tree height-diameter, aboveground and belowground biomass allometries for two West African mangrove species

Accurate estimation of biomass and carbon stocks in mangrove forests is a prerequisite for a better understanding of their role in climate regulation. Allometric equations remain appropriate tools in this context but are lacking for many mangrove species and sites across Africa. In this study, we destructively sampled 68 individual trees of the two dominant West African mangrove species (Rhizophora racemosa and Avicennia germinans) to (i) determine species-specific height-diameter allometry; (ii) evaluate biomass allocation to stem, branches, leaves and roots components; (iii) establish species-specific aboveground-, belowground- and total biomass allometric equations; and (iv) examine the accuracy of our best biomass model against existing equations for mangroves. Diameter at breast height (Dbh), total height (H), wood density and crown diameter were used as predictors in the models.Results showed that Dbh explained 53% and 62% of height variation for R. racemosa and A. germinans, respectively. Stems stored the highest biomass fractions (84.30% for R. racemosa and 52.80% for A. germinans), followed by branches, while the belowground compartment contributed to 19%–22% of the total biomass. Among the candidate biomass models, the models incorporating Dbh and height as a compound variable (Dbh2H) were the most suitable for estimating aboveground and total biomass, with 87–92% of explained variance. For the root components, wood density and crown diameter were additionally found to improve model performance for R. racemosa and A. germinans, respectively. Our study revealed that biomass in West African mangrove forests was more accurately predicted using the established equations than with the existing models.

Simultaneous exposure of contrasting Vigna radiata cultivars to Macrophomina phaseolina infection and drought stress: morpho-physiological and biochemical implications

Drought is a major abiotic stress which affects the growth and yield of crops globally. The infection caused by Macrophomina phaseolina is a significant limiting factor in the Vigna radiata (mungbean) production inflicting up to 100% yield losses under dry and hot conditions. In the present study, two cultivars of mungbean viz. RMG-492 and IPM 02-14 were exposed to combined M. phaseolina infection and drought stress. The cultivar RMG-492 was relatively more tolerant to M. phaseolina infection than IPM 02-14. There was reduction in disease incidence in plants exposed to combined stress in both the cultivars. However, a remarkable decrease in root rot (13.33%) and crown rot (20%) was observed in “IPM 02-14.” This could be accredited to a stronger defense response including increased antioxidant capacity and lignin deposition in dual stress treated plants. Moreover, differences were observed on comparing the stress response in leaves upon fungal infection under well-watered and water-deficit conditions. The salicylic acid played a significant role in fungal stress response. However, soluble sugar mediated regulation was prominent in combined stress. Therefore, it could be concluded that plants adopt distinct response strategies under combined stress which could be further exploited to produce multiple stress resistant crops.

First report of Fusarium equiseti causing root and crown rot in tomato in Mexico.

Tomato (Solanum lycopersicum L.) is one of the most important crops in Mexico due to its economic and nutritional value. Among the main diseases in tomato production is Fusarium wilt, which can cause 60% production losses (Ascencio et al, 2008). Mixed infections of Fusarium species or other fungi genera, would increase disease severity. During April to May of 2021, tomato plants with more than 60 days old, were collected from the main production areas of Aguascalientes (22°03'46.5"N 102°05'17.4"W and 22°04'53.64"N 101°58'55.81"W) and Zacatecas (23°05'59.2"N 102°41'07.3"W and 22°16'52.1"N 102°00'11.8"W) Mexico states. Plants showed main root rot, vascular bundles necrosis with corky appearance, stem crown rot, and ascending yellowing. The main root and stem crown were cut in 0.25 cm2 pieces and disinfested in 2% NaClO for one minute, rinsed with distilled water two times, placed on acidified potato dextrose agar (PDA) medium, and incubated at 25 ± 2°C for 7 days. Characteristic Fusarium growths were purified by hyphal tip on PDA, subsequently pure strains were obtained by single-spore isolation method. Several fungi colonies were obtained, but we focused on the colonies that showed abundant aerial mycelium of white color and irregular growth, which turned yellowish to golden and brown color as it ages. Carnation leaf agar (CLA) medium were used for conidia and sporodochium development. Chains of terminal, intercalary and agglomerated chlamydospores with thick, rough brown walls of 18.9 (7.46) µm in diameter (n=120) were observed in the mycelium. Macroconidia with 5 to 7 septa were 30 to 75 (28.32) µm in long and 1.2 to 4.8 (3.2) µm in wide (n=72). Basal cell developed in foot-shape, apical cell was elongated and slightly curved, and some macroconidia had swollen midd-cell. Sporodochium was orange to brown in color and microconidia were absent (Figure 1). Two representative strains from each state, LCA-3.1 and EMA-1 from Aguascalientes and ECZ-4 and LRZ-6 from Zacatecas, were selected for DNA amplification of ITS, TEF-1α and RPB2 regions, with universal primers ITS1/ITS4, EF1/EF2 and 2-5F2/7cR (White et al.1990; O'Donnell et al. 1998, 2013). PCR products were sequenced by Psomagen, Inc. (USA). The sequences obtained showed 100% of similarity among themselves and within species of the Fusarium incarnatum-equiseti species complex (FIESC) with nucleotide NCBI accessions NR_121457 (Type material) for ITS and MW362069 for TEF-1α; and 99.28% with MN170399 for RPB2 in FUSARIOID-ID database. According to morphological (Leslie and Summerell, 2006) and molecular characteristics, isolates were identified as Fusarium equiseti (FIESC 14). The LCA-3.1 sequences were selected to be deposited in GenBank with accession numbers OM812801 (ITS), OM937108 (TEF-1α) and ON653596 (RPB2). Pathogenicity tests were performed twice, under greenhouse conditions in tomato seedlings of cv. Rio Grande. Five tomato seedlings were inoculated by root immersion method (Lopez et al, 2018) in a 1x106 spores/mL solution for 8 min, and transplanted to 1L pots with sterile peat. Five controls plants were immersed in sterile water. At 14 days after inoculation, a general plant decline and slower growth compared to the control plants were observed. Subsequently, plants showed root rot, vascular necrosis, and a brown ring in stem crown. Controls were symptomless. The fungi were re-isolated from symptomatic plants and were morphologically similar to the inoculated strains. Patel et al. (2017) described the pathogenic and toxic effects of F. equiseti on tomato, causing low seed germination, and low root and shoot growth. This is the first report of F. equiseti causing root and stem rot in tomato plants in Mexico.

Probiotic Bacteria, Anaerobic Soil Disinfestation, and Mustard Cover Crop Biofumigation Suppress Soilborne Disease and Increase Yield of Strawberry in a Perennial Organic Production System.

Black root rot complex and crown rot of strawberry caused by soilborne fungi limit sustainable strawberry production in the northeastern United States, especially in perennial systems, including matted row and plasticulture. As pathogen populations build up over time in the rhizosphere and infect the root system, feeder roots are pruned, which diminishes nutrient and water uptake and causes stunted plant growth or death. Alternative management options are needed for many organic and small growers who can't use chemical fumigants due to new regulations and potential health hazards. Strawberry plug plants were grown on beneficial microbe-inoculated or uninoculated planting mix followed by transplanting in fruiting field plots that either was biofumigated with mustard cover crop (MCC), anaerobically disinfested (ASD), or left untreated. Different combinations of plug plants and field plot treatments were used to determine the efficacy of individual treatments or synergistic effects from combination treatment. Plug plants were transplanted in pretreated plastic mulched raised beds and grown following a typical organically recommended production system. Plants grown on TerraGrow (TG)-inoculated planting mix showed enhanced plant vigor in the fruiting field compared with untreated plants. Weeds that grew through planting holes were significantly (P ≤ 0.045) suppressed in ASD plots compared with untreated plots in the first year. Plants treated with a combination treatment of TG and ASD had significantly higher fruit yield in both years (2019 and 2020), although the difference was greater in the second year. Plant vigor and survival in treated plots except MCC were also significantly higher in the second year compared with the untreated control. Suppression of pathogenic microbes and plant vigor improvement in treated plots appear to be the factors providing beneficial effects and higher net economic return. Taken together, our results suggest that a combination of beneficial microbes and ASD could be an alternative to synthetic fumigation in a perennial strawberry production system.

Field Screening of Wheat Cultivars for Enhanced Growth, Yield, Yield Attributes, and Nitrogen Use Efficiencies

Optimizing nitrogen (N) inputs is crucial for maximizing wheat yield and ensuring environmental sustainability. Wheat’s economic significance in India calls for a comprehensive evaluation of its ecological implications to develop a resilient production system. This study aimed to identify and evaluate ten wheat cultivars for their yield and N-use efficiency under varying nitrogen inputs (control (N0), half of the recommended nitrogen (N75), and the recommended nitrogen (N150)) using the surface application of neem-oil-coated urea. All N inputs were applied in three splits, basal, crown root initiation, and tillering stages, and an experiment was conducted in a split-plot design. The application of N150 gave the highest dry matter accumulation (DMA) at harvesting stage (AHS) (871 g m−2), seed/spike (60), grain yield (GY = 7.4 t ha−1), straw yield (SY = 8.9 t ha−1), harvest index (HI = 45.2%), protein (12.5%), and total uptake of N (TUN) (223 kg ha−1) by the cultivar ‘HD 3249’, being closely followed by the cultivar ‘HD3117’. Six cultivars (‘HD 3298’, ‘HD 3117’, ‘HD 3249’, ‘PBW 550’, ‘HD 3086’, ‘HD 2967’) out of the ten cultivars evaluated responded well to different input treatments with respect to the grain yield efficiency index (GYEI ≥ 1). Regarding N input, N75 and N150 recorded the highest increases in plant height, AHS (16.5%; 21.2%), dry matter accumulation (DMA) at 30 days after sowing (DAS) (37.5%; 64%), DMA-60 DAS (42%; 53%), DMA-90 DAS (39.5%; 52.5%), TILL-30 DAS (19.8%; 26.4%), TILL-60 DAS (33.3%; 44%), TILL-90 DAS (37.2%; 47.2%), seed/spike (8%; 10%), 1000-grain weight (7.8%; 12.2%), and protein content (23.3%; and 33%) when compared with N0. Furthermore, the application of N75 and N150 improved GY (72.1%; 142.6%), SY (61.1%; 110.6%), BY (65.5%; 123%), and HI by 4.4% and 9%, respectively, over N0. Nitrogen addition (N75 and N150) also significantly increased total nitrogen uptake (104.7%; 205.6%), respectively, compared to N0. The correlation analysis revealed a positive association among most of the crop parameters. Overall, our research results suggest that the cultivars ‘HD 3249’ and ‘HD 3117’ have the potential to be effective options for improving N utilization efficiency, grain yield, and GYEI in North-West India.

Spatially activated conserved auxin-transcription factor regulatory module controls de novo root organogenesis in rice.

This study reveals that the process of crown root development and auxin-induced de novo root organogenesis during in vitro plantlet regeneration share a common auxin-OsWOX10 regulatory module in rice. In the fibrous-type root system of rice, the crown roots (CR) are developed naturally from the shoot tissues. Generation of robust auxin response, followed by activation of downstream cell fate determinants and signaling pathways at the onset of crown root primordia (CRP) establishment is essential for new root initiation. During rice tissue culture, embryonic calli are induced to regenerate shoots in vitro which undergo de novo root organogenesis on an exogenous auxin-supplemented medium, but the mechanism underlying spatially restricted root organogenesis remains unknown. Here, we reveal the dynamics of progressive activation of genes involved in auxin homeostasis and signaling during initiation and outgrowth of rice crown root primordia. By comparative global dataset analysis, we identify the crown root primordia-expressed genes whose expression is also regulated by auxin signaling. In-depth spatio-temporal expression pattern analysis shows that the exogenous application of auxin induces a set of key transcription factors exclusively in the spatially positioned CRP. Further, functional analysis of rice WUSCHEL-RELATED HOMEOBOX 10 (OsWOX10) during in vitro plantlet regeneration from embryogenic calli shows that it promotes de novo root organogenesis from regenerated shoots. Expression of rice OsWOX10 also induces adventitious roots (AR) in Arabidopsis, independent of homologous endogenous Arabidopsis genes. Together, our findings reveal that a common auxin-transcription factor regulatory module is involved in root organogenesis under different conditions.

Accuracy of imaging modalities (CBCT/conventional radiography) in maxillofacial fractures - A cross sectional study

Maxillofacial trauma refers to any injury to the face or jaw caused by physical force, foreign objects, or burns. For all traumatic events imaging examination is an essential component which is done both pre-operatively and post-operatively. This study was to assess the accuracy of CBCT imaging and the conventional imaging in evaluation of maxillofacial fracture. To assess the maxillofacial fracture using conventional radiography and CBCT. To compare the diagnostic acurracy of cone beam computed tomography (CBCT) with conventional radiography. To validate the best method for assessment of maxillofacial trauma.: Depending on type of fracture conventional imaging and CBCT imaging was done. Following which fracture was assessed using AOCMF classification.The most common fracture was zygomatic complex fracture of about 76.9%. CBCT showed significant P-value in assessment of level-2 fracture evaluation, extension of fracture and in Level-3, number of fragment, angulations, displacement, inferior obital fissure, crown root fracture assessment. The sensitivity and specificity of CBCT was better than conventional imaging. CBCT assess the maxillofacial fracture more precisely than conventional imaging.

Lateral root elongation in maize is related to auxin synthesis and transportation mediated by N metabolism under a mixed NO3− and NH4+ supply

A mixed nitrate (NO3−) and ammonium (NH4+) supply can promote root growth in maize (Zea mays), however, the changes in root morphology and the related physiological mechanism under different N forms are still unclear. Here, maize seedlings were grown hydroponically with three N supplied in three different forms (NO3− only, 75/25 NO3−/NH4+ and NH4+ only). Compared with sole NO3− or NH4+, the mixed N supply increased the total root length of maize but did not affect the number of axial roots. The main reason was the increased total lateral root length, while the average lateral root (LR) length in each axle was only slightly increased. In addition, the average LR density of 2nd whorl crown root under mixed N was also increased. Compared with sole nitrate, mixed N could improve the N metabolism of roots (such as the N influx rate, nitrate reductase (NR) and glutamine synthase (GS)enzyme activities and total amino content of the roots). Experiments with exogenously added NR and GS inhibitors suggested that the increase in the average LR length under mixed N was related to the process of N assimilation, and whether the NR mediated NO synthesis participates in this process needs further exploration. Meanwhile, an investigation of the changes in root-shoot ratio and carbon (C) concentration showed that C transportation from shoots to roots may not be the key factor in mediating lateral root elongation, and the changes in the sugar concentration in roots further proved this conclusion. Furthermore, the synthesis and transportation of auxin in axial roots may play a key role in lateral root elongation, in which the expression of ZmPIN1B and ZmPIN9 may be involved in this pathway. This study preliminarily clarified the changes in root morphology and explored the possible physiological mechanism under a mixed N supply in maize, which may provide some theoretical basis for the cultivation of crop varieties with high N efficiency.

Crown root ratio and angulation of various permanent teeth in patients with and without cleft lip/palate

ABSTRACT Aims and Objectives: The purpose of this study was to analyze parameters of tooth in subjects with nonsyndromic cleft lip and palate (CLCP) and to compare the findings with the control groups. Teeth in the cleft-affected and nonaffected side in the same unilateral cleft lip and palate (ULCP) patient were also compared. Materials and Methods: The study included 200 subjects in the age group of 12–37 years who were divided into two groups: nonsyndromic CLCP and control group. The control group was further subdivided into skeletal Class I, II, and III subgroups based on ANB, AO-BO, and overjet, respectively. Crown height, root length, total tooth length, crown root ratio (C/R ratio), and tooth angulations of maxillary permanent central incisors, canines, 1st premolars, and 1st molar were measured on orthopantomograms using both ITK SNAP software and manual tracing. Results: Crown heights significantly increased while root lengths significantly decreased in the CLCP patients when compared to control groups. Total tooth lengths of central incisor, canine, and 1st premolar in CLCP patients were found to be decreased significantly. C/R ratios of all the teeth of nonsyndromic CLCP group irrespective of the cleft affected or nonaffected side was found to be increased as compared to the control groups. There was a significant difference seen in crown height, root length and mesiodistal tooth angulations in the cleft affected side when compared to the non affected side in a UCLCP patient’s dentition. However the total tooth length and the C/R ratio were not affected. Conclusion: Common findings of CLCP are aberrant teeth development, altered tooth morphology, and malformed teeth. The severity of cleft has an impact on the tooth development and morphology as it was observed that delayed root development and short roots, decreased total tooth length, increased C/R ratio and variations in teeth angulations in CLCP patients were affected by the presence and severity of cleft.

Hemp Morphology and Physiology Standards for Research and Industry Applications

Hemp (Cannabis sativa L.) research and commercial production has recently experienced a global revival motivated by passage of laws reversing long-standing prohibitions and by expansion in markets. Collaborative research has been initiated in response to renewed interest in hemp production, such as the American Society for Horticultural Science Hemp Research and Extension Professional Interest Group (ASHS Hemp). Collaborators new to this crop have identified a lack of standard definitions, descriptions, and procedures for cohesive study specific to hemp production. Standards are necessary for synthesis of data gathered across research and industry programs. ASHS Hemp convened a workshop of hemp researchers and industry representatives to establish consensus on a minimum set of standards for research data and industry assessments. The resulting morphology and physiology standards developed at the workshop are presented here with a focus on plant height, flowering time, and crop quality. Plant height was defined as the vertical distance between the root crown at the soil surface and the stem node (or tip) of the apical meristem of the tallest branch. Plant height was importantly distinguished from stem length and canopy height, which may differ based on pruning and management of the plant. Flowering time was defined to indicate date of initiation of inflorescence development as the earliest day terminal flowering clusters appear visually. Flowering time was distinguished from solitary flowering behavior and floral maturity. Crop quality was determined to be a feature that should be established first by industry based on market standards and then subsequently adopted by researchers targeting outcomes in specific areas. A standard moisture content for dry flower, seed, and straw must be established. A moisture content of 10% to 12% was identified as a current standard for floral yield, whereas 8% was identified as a moisture content standard for seed crops. Bast-to-hurd ratio and decortication efficiency were fiber quality metrics identified for minimum standards, and thousand seed weight, protein content, oil content, and oil composition were considered for minimum seed quality standards. The hemp research community is well positioned to standardize genomic references and establish best management practices for production targets. These efforts would be assisted by the adoption of the proposed standard definitions, descriptions, and procedures decided by consensus at the ASHS Hemp 2022 workshop.

High-Quality Nuclear Genome and Mitogenome of Bipolaris sorokiniana LK93, a Devastating Pathogen Causing Wheat Root Rot.

Bipolaris sorokiniana, one of the most devastating hemibiotrophic fungal pathogens, causes root rot, crown rot, leaf blotching, and black embryos of gramineous crops worldwide, posing a serious threat to global food security. However, the host-pathogen interaction mechanism between B. sorokiniana and wheat remains poorly understood. To facilitate related studies, we sequenced and assembled the genome of B. sorokiniana LK93. Nanopore long reads and next generation sequencing short reads were applied in the genome assembly, and the final 36.4-Mb genome assembly contains 16 contigs with the contig N50 of 2.3 Mb. Subsequently, we annotated 11,811 protein-coding genes. Of these, 10,620 were functional genes, 258 of which were identified as secretory proteins, including 211 predicted effectors. Additionally, the 111,581-bp mitogenome of LK93 was assembled and annotated. The LK93 genomes presented in this study will facilitate research in the B. sorokiniana-wheat pathosystem for better control of crop diseases. [Formula: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.

Response of Growth and Yield of Mint (Mentha spicata L.) Cuttings to Auxin and Composition of Planting Media

Consumption of herbal medicines by Indonesian people is increasing because of the price and ease of obtaining them. One of the main ingredients of herbal medicine is mint leaves because they contain tannin and flavonoid secondary metabolites. However, the generative mint plant is very slow and needs vegetative cuttings propagation. This study aims to examine the effect of auxin-type growth regulators and the composition of the growing media on the growth and yield of mint plant cuttings. This study used a complete randomized block design with two factors. The first factor was the auxin growth regulator with four levels: without growth regulator, IBA 500 ppm, IAA 500 ppm, NAA 500 ppm. The second factor was the composition of the planting medium with three levels, namely soil, husk charcoal, and goat manure 3:3:1; 3:2:2, and 3:1:3. Three repetitions were carried out. Auxin affects the number and area of leaves. Applying 500 ppm NAA encouraged the highest leaf growth, with the number of leaves at 163.38. Growth regulator NAA 500 ppm increased the number of leaves and leaf area of mint plants, i.e., by 0.01% and 1.16% compared to the control. The growing media composition affected the crown fresh weight, root biomass, and crown root ratio. The media composition of 3:3:1 produced a crown fresh weight of 41.07 g, and the media composition 3:3:3 produced the highest biomass of 5.97 g. The media composition 3:1:3 showed the highest root crown ratio, 2.69%. Auxin and the composition of the growing media synergistically promote the growth and yield of mint cuttings.

Comparative evaluation of efficacy of physics forcep and conventional forceps for extraction of maxillary molars.

Tooth extraction is one of the most commonly performed procedures in dentistry. It is usually a traumatic procedure often resulting in immediate destruction and loss of alveolar bone and surrounding soft tissues. It is the only dental procedure which was carried out by dentists in the previous centuries and various instruments have evolved for this procedure over time. Atraumatic extraction is one of the essential dental procedures, as atraumatic extraction leads to proper wound healing and appropriate bone healing. Physics forceps have got a new role in extraction technique, that it makes just one contact point with the tooth as a unique benefit. Physics forceps depends on the physics of rotational power, lever and torque much like a bottle top removal. A study was conducted to evaluate the efficacy of physics forceps and conventional forces in the extraction of maxillary molar. Eligible participants were adults aged 18-50 diagnosed with grossly decayed maxillary molars with poor endodontic prognosis and willing to participate in the study. Exclusion criteria were as follows: patients with dilacerate roots; patients with systemic diseases like hypertension, diabetes mellitus, thyroid, tuberculosis, epilepsy seizures, COVID-19 positive; patients' non-acceptance to voluntarily participate in research a refusal to sign the informed consent. Parameters such as a crown fracture or root fracture; buccal bone fracture; time taken for extraction and operator ease on the VAS scale are assessed. Results showed that with the use of physics forces, there was very less incidence of crown fracture and no incidence of buccal bone fracture, whereas with the conventional forceps the result showed that in almost all the time taken for extraction was much more in conventional forcep and the operator ease rating was more with conventional forceps. Hence, oral surgeons as well as general practitioner should adapt the use of physics forceps in routine extractions.

Unraveling the central role of root morphology and anatomy in lodging of tef (Eragrostis tef)

Societal Impact StatementCrop diversification is considered key to ensuring agricultural sustainability and food security. Tef (Eragrostis tef (Zucc.) Trotter) is a cereal crop grown mainly in Ethiopia, where it thrives in a wide range of environments, including stress‐prone habitats. It is considered a promising new crop and is gaining popularity in cultivation and in research worldwide. Lodging, the greatest factor limiting tef productivity and its wide adoption, was targeted in this study. The results highlight the central role of root traits in tef lodging, thus paving the way to reducing lodging and improving tef productivity, crop diversification, and food security.Summary Lodging is the most prominent yield‐restricting problem in tef (Eragrostis tef (Zucc.) Trotter) cultivation, responsible for 30%–50% yield loss. A significant advance in lodging resistance has been achieved in various cereals by reducing plant height. In this study, we investigated the role of crown root morphology and anatomy, rather than plant height, in tef lodging. Twenty‐eight tef lines, representing a wide diversity in lodging tendencies and major phenotypic traits, were tested under two field environments to investigate tef lodging and related traits. Four selected lines were subjected to more intense sampling as well as anatomical analysis of crown roots. In both field studies, taller lines were associated with greater lodging shortly before flowering, but not at plant maturity, whereas crown root diameter exhibited an association with reduced lodging, which became highly significant at maturity. Moreover, a greater proportion of root cortical aerenchyma developed in lodging‐susceptible genotypes, possibly reducing plant anchorage. A positive association between grain yield and lodging presents a major challenge for tef breeding. Our results suggest that root traits play a central role in tef lodging responses. We propose that semi‐dwarfism should be complemented by targeting root traits, to promote lodging resistance in tef.

Evaluation of root position during orthodontic treatment via multiple intraoral scans with automated registration technology

This study aimed to introduce a method for dynamically monitoring root position with intraoral scans using automated crown registration and root segmentation with artificial intelligence technology and to evaluate its accuracy using a novel semiautomatic root apical distance measurement procedure. The sample consisted of 412 teeth from 16 patients whose intraoral scans and cone-beam computed tomography (CBCT) were obtained before and after treatment. Crowns from intraoral scans and roots segmented from CBCT with artificial intelligence technology before treatment were registered, integrated, and divided into individual teeth. With an automated registration program, the virtual root was constructed by crown registration before and after treatment. The distance deviation of the root position at the apex between the virtual root and the actual root, which served as a control, was measured and decomposed into the distance deviation in the mesiodistal and buccolingual directions. The shell deviation of crown registration between CBCT and oral scan before treatment was 0.19 ± 0.04 mm and 0.22 ± 0.04 mm in the maxilla and mandible, respectively. The apical root position distance deviations were 0.27 ± 0.12 mm in the maxilla and 0.31 ± 0.11 mm in the mandible. There was no significant difference between root position in mesiodistal and buccolingual directions. Applying automated crown registration and root segmentation with artificial intelligence technology in this study improved the accuracy and efficiency of monitoring root position. In addition, the innovative semiautomatic distance measurement procedure can more precisely distinguish the root position discrepancy.

First report of seedling stem blight of mango caused by Neofusicoccum parvum in Italy.

Seedling blight of mango (Mangifera indica L.) was observed in a commercial nursery located in Messina province (eastern Sicily, Italy) during winter of 2021. More than 30% of 3,000 seedlings, about three to six months old, of mango cv. Gomera 3 showed symptoms of basal stem blight. The symptoms started from seed, led to the decline and subsequent death of the plants. Necrotic lesions appeared at crown level two months after sowing. The stem tissues of ten symptomatic plants were cut, surface sterilized, dipped in 1.5% sodium hypochlorite for 1 min and transferred onto potato dextrose agar medium (PDA) and incubated at 25°C for four days. Approximately 60% of stem tissues developed very similar fungal colonies, resembling to Botryosphaeriaceae. A total of four representative isolates were collected through single hyphal-tip and stored at 4 °C. The internal transcriber spacer region (ITS) was amplified with primers, ITS5/ITS4 (White et al., 1990), and EF1-728F and EF1-986R (Carbone and Kohn, 1999) were used to amplify part of the translation elongation factor 1alpha gene (tef1-α), and primers Bt2a/Bt2b (Glass and Donaldson, 1995) were used for the partial β-tubulin (tub2). The obtained sequences were deposited in GenBank with accession numbers: ON911292-95 for the ITS, ON933621-24 for tef1-α and ON933625-28 for tub2.To compare the results, 50 additional sequences were selected and inserted in the alignment according to the recent literature on the Botryosphaeriaceae (Bezerra et al., 2021; Zhang et al., 2021). Maximum parsimony analysis (MP) of concatenated dataset (ITS + tef1-α + tub2) was performed in PAUP v.4.0a. Clade support was assessed by 1,000 bootstrap replicates and Botryosphaeria dothidea was used as an outgroup. Our isolates clustered within the group of Neofusicoccum parvum (71% bootstrap value) (ex-type CMW9081). Based on these results, and morphological data (50 conidia length × width average: 18.1 × 6.6, respectively) our isolates (named MC) were identified and confirmed as Neofusicoccum parvum (Pennycook & Samuels) Crous, Slippers & A.J.L. Phillips. Pathogenicity tests were also conducted on 18 mango cv. Gomera 3 seedlings. The crown roots of each seedling were mechanically wounded and a mycelial plug of the isolate MC14 was placed onto them and covered with soil. Controls (three seedlings) were inoculated with sterile PDA only. Seedlings were maintained in a growth chamber with a 12 hrs photoperiod at 25°C ± 1°C and watered regularly. After five days, stem lesions appeared externally (1.6 cm) and one month after the inoculation, all the inoculated seedlings died. However, controls did not show any obvious symptoms. Re-isolations were conducted as described above and fulfilled Koch's postulates confirming pathogenicity. Among the diseases affecting mango plants, Botryosphaeriaceae represent a serious threat in Sicily as reported by Aiello et al., 2022. The endophytic behaviour of Botryosphaeriaceae is well known, making them latent pathogens (Slippers and Wingfield, 2007). In Italy, N. parvum was detected in mango orchards since 2013 (Ismail et al. 2013), but symptoms of seedlings stem blight have never been reported in the nursery. In Sicily, an increase of Botryosphaeriaceae infection has been observed recently, especially in nurseries, where N. parvum has been identified as a most destructive pathogen (Aiello et al., 2020; Gusella et al., 2021). To our knowledge, this is the first report worldwide of N. parvum causing mango seedling blight. The high incidence of infected seedlings detected in this study highlights the potential risk during propagation in the nursery, representing a significant source of inoculum for the field.

Optical sensor-based nitrogen management: an environmentally friendly and cost-effective approach for sustainable wheat (Triticum aestivum L.) production on Eastern plains of India

An optical sensor like Green Seeker (GS) is an emerging tool for site-specific in-season fertilizer nitrogen management strategy. The objective of this study was to establish an in-season estimate of yield (INSEY)–grain yield (GY) relation in wheat grown under Eastern plains of India using normalized difference vegetation index (NDVI) at 45 and 65 days after sowing (DAS). Data revealed lower NDVI values at 65 DAS over 45 DAS in no-nitrogen (N), phosphorus (P), and potassium (K) applied control plots as well as in N-rich plots (225 kg ha−1 N); on the contrary, the values were higher at 65 DAS over 45 DAS in treatments where some N fertilizers were added based on NDVI readings at 45 DAS. Response index (RI) showed higher chances of response to external application of N in NDVI-based treatments. The INSEY–GY relation for wheat at 45 and 65 DAS was worked out as a power function of y = 64265x1.171 and y = 46949x1.036 (y is the attainable yield in kg ha−1 and x is INSEY), respectively. The yields could fairly be predicted through this relation even at 45 DAS, though the relationship was more robust at 65 DAS (R2 = 0.94). A prescriptive dose of 60 kg N ha−1 as basal + 60 kg N ha−1 at crown root initiation (CRI) stage followed by NDVI sensor-guided N application (at 45 and 65 DAS) brought about a significant improvement in yield performances, N use efficiencies with higher net returns, and benefit-to-cost ratio. The results proved the reliability of the NDVI sensor as an important tool for the optimization of fertilizer nitrogen in wheat grown under the Eastern plains of India. The new INSEY–GY relation developed through this trial could successfully be used for yield prediction in the Eastern plains of India under changing climate.

Molecular Characterization of Germin-like Protein Genes in Zea mays (ZmGLPs) Using Various In Silico Approaches.

Germin (GER) and germin-like proteins (GLPs) play an important role in various plant processes. Zea mays contains 26 germin-like protein genes (ZmGLPs) located on chromosomes 2, 4, and 10; most of which are functionally unexplored. The present study aimed to characterize all ZmGLPs using the latest computational tools. All of them were studied at a physicochemical, subcellular, structural, and functional level, and their expression was predicted in plant development, against biotic and abiotic stresses using various in silico approaches. Overall, ZmGLPs showed greater similarity in their physicochemical properties, domain architecture, and structure, mostly localized in the cytoplasmic or extracellular regions. Phylogenetically, they have a narrow genetic background with a recent history of gene duplication events on chromosome 4. Functional analysis revealed novel enzymatic activities of phosphoglycolate phosphatase, adenosylhomocysteinase, phosphoglycolate phosphatase-like, osmotin/thaumatin-like, and acetohydroxy acid isomeroreductase largely mediated by disulfide bonding. Expression analysis revealed their crucial role in the root, root tips, crown root, elongation and maturation zones, radicle, and cortex with the highest expression being observed during germination and at the maturity levels. Further, ZmGLPs showed strong expression against biotic (Aspergillus flavus, Colletotrichum graminicola, Cercospora zeina, Fusarium verticillioides, and Fusarium virguliforme) while limited expression was noted against abiotic stresses. Concisely, our results provide a platform for additional functional exploration of the ZmGLP genes against various environmental stresses.

Genetic dissection of crown root traits and their relationships with aboveground agronomic traits in maize

The crown root system is the most important root component in maize at both the vegetative and reproductive stages. However, the genetic basis of maize crown root traits (CRT) is still unclear, and the relationship between CRT and aboveground agronomic traits in maize is poorly understood. In this study, an association panel including 531 elite maize inbred lines was planted to phenotype the CRT and aboveground agronomic traits in different field environments. We found that root traits were significantly and positively correlated with most aboveground agronomic traits, including flowering time, plant architecture and grain yield. Using a genome-wide association study (GWAS) coupled with resequencing, a total of 115 associated loci and 22 high-confidence candidate genes were identified for CRT. Approximately one-third of the genetic variation in crown root was co-located with 46 QTLs derived from flowering and plant architecture. Furthermore, 103 (89.6%) of 115 crown root loci were located within known domestication- and/or improvement-selective sweeps, suggesting that crown roots might experience indirect selection in maize during domestication and improvement. Furthermore, the expression of Zm00001d036901, a high-confidence candidate gene, may contribute to the phenotypic variation in maize crown roots, and Zm00001d036901 was selected during the domestication and improvement of maize. This study promotes our understanding of the genetic basis of root architecture and provides resources for genomics-enabled improvements in maize root architecture.