Abstract We consider the type II superstring compactified on Calabi-Yau threefolds, at finite temperature. The latter is implemented at the string level by a free action on the Euclidean time circle. We show that all Kähler and complex structure moduli involved in the gauge theories geometrically engineered in the vicinity of singular loci are lifted by the stringy thermal effective potential. The analysis is based on the effective gauged super-gravity at low energy, without integrating out the non-perturbative BPS states becoming massless at the singular loci. The universal form of the action in the weak coupling regime and at low enough temperature is determined in two cases. Namely, the conifold locus, as well as a locus where the internal space develops a genus-g curve of A N −1 singularities, thus realizing an SU(N ) gauge theory coupled to g hypermultiplets in the adjoint. In general, we argue that the favored points of stabilization sit at the intersection of several such loci. As a result, the entire vector multiplet moduli space is expected to be lifted, together with hypermultiplet moduli. The scalars are dynamically stabilized during the cosmological evolution induced by the back-reaction of the thermal effective potential on the originally static background. When the universe expands and the temperature T drops, the scalars converge to minima, with damped oscillations. Moreover, they store an energy density that scales as T 4, which never dominates over radiation. The reason for this is that the mass they acquire at one-loop is of order the temperature scale, which is time-dependent rather than constant. As an example, we analyze the type IIA compactification on a hy-persurface $$ \mathbb{P}_{{\left( {1,1,2,2,6} \right)}}^4 $$ [12], with Hodge numbers h 11 = 2 and h 12 = 128. In this case, both Kähler moduli are stabilized at a point, where the internal space develops a node and an enhanced SU(2) gauge theory coupled to 2 adjoint hypermultiplets. This shows that in the dual thermal heterotic picture on K3 × T 2, the torus modulus and the axio-dilaton are stabilized, though in a strong coupling heterotic regime.
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