Cage Formation Research Articles

Charge density-mediated crystallization kinetics for SSZ-13 transformed from coal fly ash-derived Al-rich analcite

Interzeolite transformation (IZT) is a powerful method for controlling the framework type, aluminum distribution, and hierarchical structures of zeolite. However, the in-depth mechanisms underlying IZT remain unexplored. In this study, we reveal a distinctive nucleation pathway and structural evolution of zeolite SSZ-13 during IZT that is different from the traditional hydrothermal synthesis methods. Utilizing two aluminum sources—al-rich zeolite analcite and aluminum sulfate—we accelerated the crystallization process with SSZ-13 seed crystals and TMAda-OH. Our findings indicate that the Al content, representing the charge density of the nucleation micro-environment, plays a critical role in shaping the framework and nucleation pathway. Nucleation occurred at the interface between analcite and the silica solution during IZT, characterized by a high-silica micro-environment with low charge density. In this environment, the precursor predominantly replicated the double six rings (D6R) of SSZ-13 seed fragments, forming double four rings (D4R) and CHA cages which resulted in a short induction period, fewer nucleation sites, and larger crystals size (∼1.5 μm). Conversely, when aluminum sulfate was mixed with silica sol, a uniform, Al-rich nucleation micro-environment with high negative charge density was established. the precursor primarily interacted with TMAda+ ions for charge compensation rather than with seed fragments. This slow interaction promoted the formation of CHA cages instead of D6R and D4R, leading to a longer induction period, increased nucleation sites, and smaller SSZ-13 crystal sizes (∼150 nm). This study elucidates how the charge density of micro-environment mediated interaction between precursors, organic structure-directing agent, and seed, providing valuable insights into the crystallization kinetics of IZT.

Synthesis of a Pd2L4 Hydrazone Molecular Cage Through Multiple Reaction Pathways.

Molecular cages are preorganized molecules with a central cavity, typically formed through the reaction of their building blocks through chemical bonds. This requires, in most cases, forming and breaking reversible bonds during the cage formation reaction pathway for error correction to drive the reaction to the cage product. In this work, we focus on both Pd-ligand and hydrazone bonds implemented in the structure of a Pd2L4 hydrazone molecular cage. As the cage contains two different types of reversible bonds, we envisaged a cage formation comparative study by performing the synthesis of the cage through three different reaction pathways involving the formation of Pd-ligand bonds, hydrazone bonds, or a combination of both. The three reaction pathways produce the cage with yields ranging from 73% to 79%. Despite the complexity of the reaction, the cage is formed in a high yield, even for the reaction pathway that involves the formation of 16 bonds. This research paves the way for more sophisticated cage designs through complex reaction pathways.

Biodegradable MAM-based amphiphilic block copolymers: Toward efficient and eco-friendly kinetic inhibitors for methane hydrate formation

The development of low dosage hydrate inhibitors holds significant implications for the oil and gas industry. Some commercially available inhibitors, such as Luvicap EG, are derived from the lactam-containing polymer PVCap, which exhibit limited biodegradability and possess low cloud point (30-40℃), thereby constraining their practical utility. The present study successfully synthesized a series of novel amphiphilic block copolymers based on methacrylamide (MAM) by introducing biodegradable hydrophobic esters (ε-caprolactone (CL), δ-valerolactone (VL), and glycolide (GA)) onto the main chain of poly (methyl acrylamide) (PMAM), serving as KHIs. The synthesized MAM-based polymers maintain water solubility within the range of 0–98 ℃ without thermal responsiveness, effectively preventing deposition issues associated with traditional KHIs. Additionally, all MAM-based polymers demonstrated good biodegradability. The dynamics experiments have shown that PMAM homopolymers did not possess KHI effect, while the MAM-based block copolymers, especially PMAM-b-PVL, exhibited excellent performance in inhibiting hydrate nucleation. At low concentrations, the KHI effect of PMAM-b-PVL was comparable to that of the commercial KHI Luvicap EG. The in-situ Raman spectroscopy experiment further revealed the inhibition mechanism of the amphiphilic polymers, which was achieved by forming effective arrangements at the gas–liquid interface and disrupting the water structure in the interfacial region, thereby impeding the formation of hydrate cages, especially large cages. The findings provided a promising and environmentally friendly solution for the management of hydrates in the oil and gas industry

Pnictogen-Assisted Self-Assembly as a Means to Study Mediated Thiol/Disulfide Exchange in Supramolecular Dynamic Covalent Assemblies.

Thiol-disulfide interchange has been a large field of study for both biochemists and physical organic chemists alike due to its prevalence within biological systems and fundamentally interesting dynamic nature. More recently, efforts have been made to harness the power of this reversible reaction to make self-assembling systems of macrocyclic molecules. However, less effort has focused on the fundamental work of isolating these assemblies and studying the factors that control the assembly and sorting of these emerging cyclic systems. A more complete fundamental understanding of factors controlling such self-assembly could also improve understanding of the complex systems biology of thiol exchange while also aiding in the design of dynamic thiol assembly to enable applications ranging from drug delivery and biosensing to new materials synthesis. We have shown previously that pnictogen-assisted self-assembly enables formation of discrete disulfide macrocycles and cages without competition from polymer formation for a wide variety of alkyl thiols. In this study, we report the expansion of pnictogen-assisted self-assembly methods to form disulfide bearing macrocycles from aryl thiol containing ligands, allowing access to previously unreported molecules. These studies complement classical physical organic and chemical biology studies on the rates and products of aryl thiol oxidation to disulfides, and we show that this self-assembly method revises some prevailing wisdom from these key classical studies by providing new product distributions and new isolable products in cyclic disulfide formation.

Self-Assembled Triangular Prismatic Cages with Kinetic Inertness.

Two triangular prismatic cages were synthesized by combining a trishydrazide and two bisformyl precursors in strongly acidic water, where the dynamic nature of hydrazone was turned ON. An anionic guest was used as the template to drive the cage formation. Performing counterion exchange removed both the template and the Brønsted acid. The removal of the latter afforded the cages' kinetic inertness by turning OFF the reversibility of hydrazone. The cages can thus be used for recognizing various guests in water without observable degradation, driven by the hydrophobic effect. Upon being accommodated within the cage cavities, an anthracene derivative was protected from UV-stimulated oxidation, which would occur otherwise in the bulk solution without the protection from the host.

Tri‐ and Hexadentate Poly‐Lewis Acids – Attempts to Unravel the Complex Dynamics of Cage and Capsule Formation in Solution

AbstractTwo tri‐ and two hexadentate poly‐Lewis acids (PLAs) with calyx‐like structures of C3 symmetry containing aluminum‐ and boron‐containing Lewis acidic functions were prepared by tin‐metal exchange reactions. The triply hydrosilylated [12]annulene served as basic framework. It forms a calyx‐like structure by the stereo‐ and regioselective attachment of three SiMeCl2 groups to the planar [12]annulene. The PLA precursors were generated by attaching three or six trimethylstannylethynyl groups to the silicon atoms. Lewis acid functions were introduced using the reagents bis‐(bis(trimethylsilyl)methyl)aluminium hydride (HAl[CH(SiMe3)2]2) and catecholatochloroborane (ClBCat). The complexation behavior of the PLAs towards different Lewis bases was investigated by NMR. Bases included pyridine, polydentate nitrogen‐ and phosphorus‐containing bases. Additionally, three molecules of a bidentate phosphorus‐containing base were captured with hexadentate PLAs. Diffusion NMR experiments provided insight into the aggregation processes: some of the adducts had a significantly larger volume than expected, indicating the formation of larger adducts than the expected 1 : 1 adduct, including larger 2 : 2 adduct cages. The distances between the Lewis acid units and the steric requirement of the attached substituents determine the complexation behavior of the PLAs. Thus, the weak Lewis acidic BCat units show no (tridentate case) or a strong (hexadentate case) interaction with PMe2‐containing bases, if they can act cooperatively.

Ligand‐Directed Synthesis of a Self‐Organized Chloro‐Bridged Cubic Pd(II) Cage Showing Selective Encapsulation of Phenols

AbstractThe synthesis and guest recognition properties of a neutral Pd24‐cubic cage, [{Pd3(NiPr)3PO}8(μ2‐Cl)24] 1 are reported. The formation of the cubical assembly takes place by an exclusive one‐pot ligand‐assisted pathway directed by an oximido linker. The initial coordination of the oximido ligand pre‐organizes the [Pd3(NiPr)3PO]3+ polyhedral building units into a tetrameric intermediate, which then transforms into an oximido‐tethered tetrahedral assembly and to the cubical cage 1 in the presence of chloride ions. In the absence of the directing oximido linker, no cage formation was observed, and the Pd6‐precursor was found to undergo self‐condensation, giving rise to a new pentameric polyhedral cluster, [Pd5{(NiPr)3PO}2(OAc)2(OH)2] 2. The central cavity of the cube has been probed for guest encapsulation studies, which shows a high binding with phenolic guest molecules with association constants of the order of 104–105 M−1. The favorable formation of host–guest complexes was attributed to the strong hydrogen bonding interactions between the host and guest functional groups.

Ligand-Directed Synthesis of a Self-Organized Chloro-Bridged Cubic Pd(II) Cage Showing Selective Encapsulation of Phenols.

The synthesis and guest recognition properties of a neutral Pd24-cubic cage, [{Pd3(NiPr)3PO}8(μ2-Cl)24] 1 are reported. The formation of the cubical assembly takes place by an exclusive one-pot ligand-assisted pathway directed by an oximido linker. The initial coordination of the oximido ligand pre-organizes the [Pd3(NiPr)3PO]3+ polyhedral building units into a tetrameric intermediate, which then transforms into an oximido-tethered tetrahedral assembly and to the cubical cage 1 in the presence of chloride ions. In the absence of the directing oximido linker, no cage formation was observed, and the Pd6-precursor was found to undergo self-condensation, giving rise to a new pentameric polyhedral cluster, [Pd5{(NiPr)3PO}2(OAc)2(OH)2] 2. The central cavity of the cube has been probed for guest encapsulation studies, which shows a high binding with phenolic guest molecules with association constants of the order of 104-105 M-1. The favorable formation of host-guest complexes was attributed to the strong hydrogen bonding interactions between the host and guest functional groups.

Synthesis of Oxaazaisowurtzitane Derivatives Via Condensation of p‐Toluenesulfonamide With Glyoxal

ABSTRACTThis work presents the study results on the acid‐catalyzed cascade condensation of p‐toluenesulfonamide with glyoxal in H2SO4 in order to synthesize aza‐ and oxaazaisowurtzitanes—a platform for promising high‐energy‐density compounds—and explore their formation processes. The effects of the ratio of starting reactants, acidity, reaction medium concentration, and temperature on this process were studied in detail. Five novel compounds were derived, including four oxaazaisowurtzitanes comprising one to three aza groups, and one condensation intermediate. The most favorable conditions for the formation of the resultant caged compounds were established and some new regularities of the process were revealed. For instance, the reaction medium concentration was discovered for the first time to influence the generation process of oxaazaisowurtzitanes via direct condensation. The limiting stage of the cage formation process of oxaazaisowurtzitanes was identified. The formation rate of the oxaazaisowurtzitanes was shown to be dependent on their structure. The factor dramatically reducing the yield of the oxaazaisowurtzitanes at elevated synthesis temperature was also revealed.

Origins of Severe Structural Changes during Alloying-Dealloying Reactions in Black Phosphorus.

Li-alloying reactions facilitate the incorporation of a large number of Li atoms into the crystalline structures of electrodes, such as black phosphorus (BP). However, the reactions inevitably induce multistep phase transitions characterized by drastic atomic rearrangements and lattice collapse. Despite many theoretical and experimental studies on alloying mechanisms, long-term debates persist regarding the structures of the intermediate phases, the accurate pathways of phase transitions, the formation of specific configurations, and alloying/dealloying reversibility. Here, through a combination of operando electron diffraction measurements and ab initio simulations at the atomic and electronic scales, we identify key factors that govern the severe structural changes during alloying-dealloying reactions in BP. P-P bonds of three-bond P atoms are continuously broken during lithiation, generating two-bond P atoms with a high ability to accept inserted electrons and Li ions. Consequently, the pristine layered structure in BP is transformed to P7 cages in Li3P7, which then evolve to chain configurations in LiP and finally to isolated P atoms in Li3P. Specifically, the preferential formation of the P7 cage results from its lowest binding energy with three Li ions compared to other cage isomers. Furthermore, only LiP can be reversibly transformed to the crystalline structure of Li3P7 during charge, but it is thermodynamically favorable for Li3P7 and Li3P intermediates to be delithiated to amorphous structures. Our findings offer unique insights into the alloying mechanisms and deepen the fundamental understanding of alloying anode systems.

Monitoring the Dynamics of the Galvanic Replacement Reaction to Develop Free-Standing Electrocatalysts

Hydrogen (H2) is well-known for its potential to become the future fuel and bring a more sustainable energy system [1]. The selective electrooxidation of organic compounds from biomass appears to be a possible substitute for the kinetically slow oxygen evolution reaction (OER) at the anode, which increases the electrical energy input for a conventional water electrolysis in alkaline media [2]. However, this approach is currently impeded by limited fundamental knowledge of the different active sites of electrocatalysts. The latter can be used to control selectivity at low potential and high current density to co-generate value-added products at the anode instead of CO2 by complete oxidation. Nanostructured gold-based multi-metal electrocatalysts can meet such objectives. Particularly in the electro-valorization of cellulosic biomass at electrode potentials unfavorable to C-C bond breaking and high overall cell voltage.To develop such electrocatalysts, we have initiated a multivariate methodology to study the dynamics of galvanic replacement between silver and gold. This procedure allows us to control nanoporosity and nanoalloying in the resulting gas diffusion electrode (GDE): GDE-Ag1-xAux. GDE-Ag represents the electrode upon which Ag particles were electrochemically grown prior to reaction with Au(III). Thermodynamically, silver with E°(Ag+/Ag) = 0.8 V vs SHE (standard hydrogen electrode) can be replaced by gold with E°(AuCl4 –/Au) = 1.0 V vs SHE according to: 3Ag + xKAuCl4(aq) → 3xAgCl + xKCl + Ag3-3xAux.[2,3] From a kinetic point of view, the challenge is to capture in real time the formation of metal cages of Ag-Au alloys after a '3by1' atomic exchange that introduces nanoporosity and electronic strain as silver and gold have a similar atomic radius. To interrogate the driving force behind this redox process, we have also established an electrochemical methodology to extract quantitative data, allowing detailed capture of the mixed electrochemical and mass transport (diffusion) kinetics. As the precipitation product AgCl leads to pore fouling, we have developed an efficient methodology to trigger its instant dissolution as soon as it is formed, thus promoting the production of a high-quality alloy. As shown in Figure 1, upon injection of a KAuCl4 solution into a degassed solution in contact with the GDE-Ag electrode, the open circuit potential (OCP) begins to change. This evolution is due to the modification of the electrochemical interface as silver atoms are progressively replaced by gold atoms. Thereby, leading to a regulated potential defined either by the Ag(I)/Ag redox couple, or by the Au(III)/Au pair. Interestingly, we found that the OCP variation logically depends on initial conditions such as Ag loading on the GDE, KAuCl4 concentration, Ag particle size, etc. This fundamental knowledge has led to the synthesis of efficient electrocatalysts for the oxidation of cellulose subunits in alkaline media with an onset electrode potential much lower than OER (E < 1 V vs RHE (reversible hydrogen electrode)). Indeed, the formation of an alloy phase, the creation of nanoporosity within it and the free-standing nature amplify, through synergistic and electronic effects, the electrocatalytic efficiency. Acknowledgments This work was funded by French National Research Agency (ANR-22-CE43-0004).

Interactions between small organic molecules and water measured using pressure perturbation calorimetry

Aqueous liquid mixtures play a critical role in many biological and chemical processes. Solutes including sugars, sugar alcohols, carboxylic acids, alcohols and acetone can affect the hydrogen-bonded structure of water and this can be measured using pressure perturbation calorimetry (PPC). In binary water–solute mixtures, Δ(∂CP/∂P)T is a measure of the structure of the water component. At low alcohol concentrations, negative Δ(∂CP/∂P)T values are consistent with clathrate-like water cages around the alkyl moieties. Conversely, when solutes hydrogen bond with water it interferes in the formation of “ice-like” water and is observable as a positive Δ(∂CP/∂P)T. The Δ(∂CP/∂P)T at increasing concentrations of ethanol, acetone and acetic acid in water displayed very different behaviors. Ethanol–water mixtures had three distinct concentration dependent phases; the first, with ethanol surrounded by water molecules, followed by the ethyl groups self-associating breaking the clathrate-like cages, and the ethanol–water network displacing all of the bulk water. Acetic acid–water mixtures display nonlinearity in Δ(∂CP/∂P)T versus acetic acid concentration consistent with acetic acid self-interaction which interferes with acetic acid capacity to disrupt water structure. Acetone-water mixtures display linearity in Δ(∂CP/∂P)T versus acetone concentration which is consistent with acetone’s inability to hydrogen bond with other acetone molecules. The lack of negative Δ(∂CP/∂P)T values in acetic acid-water and acetone-water mixtures suggests there is sufficient self-association between these solutes to prevent clathrate-like water cage formation. PPC can provide invaluable insight into the behavior of aqueous binary mixtures.

Ligand Conformation Controls Assembly of a Helicate/Mesocate, Heteroleptic [Pd2L2L'2] Cages and a Six-Jagged [Pd6L12] Ring.

Molecular building blocks, capable of adopting several strongly deviating conformations, are of particular interest in the development of stimuli-responsive self-assemblies. The pronounced structural flexibility of a short acridone-based bridging ligand, equipped with two monodentate isoquinoline donors, is herein exploited to assemble a surprisingly diverse series of coordination-driven Pd(II) architectures. First, it can form a highly twisted Pd2L4 helicate, transformable into the corresponding mesocate, controlled by temperature, counter anion and choice of solvent. Second, it also allows the formation of heteroleptic cages, either from a mix of ligands with Pd(II) cations or by cage-to-cage transformation from homoleptic assemblies. Here, the acridone-based ligand tolerates counter ligands that carry their donors either in a diverging or converging arrangement, as it can rotate its own coordination sites by 90° and structurally adapt to both situations via shape complementarity. Third, by a near 180° rotation of only one of its arms, the ligand can adopt an S-shape conformation and form an unprecedented C6h-symmetric Pd6L12 saw-toothed six-membered ring.

Selective Formation of Small and Large Coordination Cages and Their Catalytic Differences.

Self-assembly of CuX2 (X- = BF4-, ClO4-, and CF3SO3-) with a new tridentate 5,5',5″-(((2,4,6-trimethylbenzene-1,3,5-triyl)tris(methylene))tris(oxy))triisoquinoline (L) gives rise to single-crystal pairs consisting of small and large cages, [X@Cu2X2L4]X and [Cu6X12L8], respectively, via selection of solvents. In particular, the large cage is transformed into a small cage in acetonitrile above 50 °C. A significant difference in heterogeneous catechol oxidation catalysis between the small and large cages is observed. Such notable catechol-oxidation-catalytic effects can be explained by maintenance of the Cu···Cu distance at the catalytic center. This research is a direct systematic example of both cage-size control via solvent selection and the significance of the Cu···Cu distance in catechol oxidation catalysis with copper (Cu).

Molecular insights into the impact of mineral pore size on methane hydrate formation

Natural gas hydrates are not only substantial energy sources but also have significant applications in the chemical industry and other fields. Although investigating hydrate formation in sediment minerals is crucial for their development and utilization, the underlying hydrate formation mechanism remains unclear. Here, molecular simulations were conducted in systems incorporating hydrophobic and hydrophilic pores of different sizes to investigate methane hydrate formation processes. The findings suggest that, as the hydrophobic slit size increases, there is a larger number of dissolved methane after the system reaches a metastable equilibrium state. The probability of cage formation indicates that hydrate cages readily form on hydrophobic surfaces or in the solution phase near the solution/gas interface. The larger slits are preferred for hydrate nucleation, regardless of whether the surface is hydrophobic, with most initial nuclei located near the liquid/methane interface. However, the interface perturbation can lead to the movement and growth of hydrate nuclei near the solution/methane interface into the bulk solution phase. Additionally, hydrate can nucleate and grow on the hydrophobic surface, facilitated by the adsorbed methane molecules and nonstandard cages. Pores hinder methane storage capacity in the hydrate phase due to the confinement effect and the amorphous nature of the hydrate formed. These molecular-level findings enhance our understanding of hydrate formation in sedimentary environments and porous materials, benefiting the development of natural gas hydrates and the use of porous materials for gas storage and transportation.

Enantiopure trigonal bipyramidal coordination cages templated by in situ self-organized D2h-symmetric anions

The control of a molecule’s geometry, chirality, and physical properties has long been a challenging pursuit. Our study introduces a dependable method for assembling D3-symmetric trigonal bipyramidal coordination cages. Specifically, D2h-symmetric anions, like oxalate and chloranilic anions, self-organize around a metal ion to form chiral-at-metal anionic complexes, which template the formation of D3-symmetric trigonal bipyramidal coordination cages. The chirality of the trigonal bipyramid is determined by the point chirality of chiral amines used in forming the ligands. Additionally, these cages exhibit chiral selectivity for the included chiral-at-metal anionic template. Our method is broadly applicable to various ligand systems, enabling the construction of larger cages when larger D2h-symmetric anions, like chloranilic anions, are employed. Furthermore, we successfully produce enantiopure trigonal bipyramidal cages with anthracene-containing backbones using this approach, which would be otherwise infeasible. These cages exhibit circularly polarized luminescence, which is modulable through the reversible photo-oxygenation of the anthracenes.

Atomistic Insights into Carbon Dioxide Sequestration in Natural Gas Hydrates in the Presence of Mixture of Flue and Noble Gases

AbstractThe exchange of carbon dioxide with methane in natural gas hydrates (NGHs) is one of the sustainable approaches for the sequestration of carbon dioxide in NGHs. However, the formation of mixed CH4─CO2 hydrates during CH4─CO2 exchange in NGHs reduces the rate of CH4─CO2 exchange in NGHs. It is reported that molecular level insights into CH4─CO2 exchange in NGHs using quaternary‐gas systems of CH4, CO2, and a mixture of flue (H2S and N2) and noble (Ne, Ar, Kr, and Xe) gases in heterogeneous medium using molecular dynamics simulation techniques. The sequestration of gases other than CH4 in the new hydrate cages besides the interface is the highest in CO2:H2S:Ar (2:1:1) system among all the reported quaternary‐gas systems. The results show that Ar enhances CO2 sequestration in NGHs in the presence of H2S rather than N2. The hydrate growth occurs due to the formation of dual hydrate cages. Among the methane molecules released from the hydrate slab in a binary‐gas (CH4─CO2) system, &gt; 60 % of the released methane molecules reform new cages beside the interface. On the other hand, only ≈ 50 % of the released methane molecules reform new hydrate cages besides the interface in CO2:H2S:Ar (2:1:1) system.

Synthesis of Calix[4]arene-Based Porous Organic Cages and Their Gas Adsorption.

Two crystalline large-sized porous organic cages (POCs) based on conical calix[4]arene (C4A) were designed and synthesized. The four-jaw C4A unit tends to follow the face-directed self-assembly law with the planar triangular building blocks such as tris(4-aminophenyl)amine (TAPA) or 1,3,5-tris(4-aminophenyl)benzene (TAPB) to generate a predictable cage with a stoichiometry of [6+8]. The formation of the large cages is confirmed through their relative molecular mass measured using MALDI-TOF/TOF spectra. The protonated molecular ion peaks of C4A-TAPA and C4A-TAPB were observed at m/z 5109.0 (calculated for C336H240O24N32: m/z 5109.7) and m/z 5594.2 (calculated for C384H264O24N24: m/z 5598.4). C4A-POCs exhibit I-type N2 adsorption-desorption isotherms with the BET surface areas of 1444.9 m2 ⋅ g-1 and 1014.6 m2 ⋅ g-1. The CO2 uptakes at 273 K are 62.1 cm3 ⋅ g-1 and 52.4 cm3 ⋅ g-1 at a pressure of 100 KPa. The saturated iodine vapor static uptakes at 348 K are 3.9 g ⋅ g-1 and 3.5 g ⋅ g-1. The adsorption capacity of C4A-TAPA for SO2 reaches to 124.4 cm3 ⋅ g-1 at 298 K and 1.3 bar. Additionally, the adsorption capacities of C4A-TAPA for C2H2, C2H4, and C2H6 were evaluated.

Stepwise Synthesis of Low-Symmetry Hexacationic Pyridinium Organic Cages.

An efficient approach was developed for the synthesis of the well-known BlueCage by pre-bridging two 2,4,6-tris(4-pyridyl)-1,3,5-triazine (TPT) panels with one linker followed by cage formation in a much improved yield and shortened reaction time. Such a stepwise methodology was further applied to synthesize three new pyridinium organic cages, C2, C3, and C4, where the low-symmetry cages C3 and C4 with angled panels demonstrated better recognition properties toward 1,1'-bi-2-naphthol (BINOL) than the high-symmetry analogue C2 featuring parallel platforms.

Stimulus-responsive assembly of nonviral nucleocapsids

Controlled assembly of a protein shell around a viral genome is a key step in the life cycle of many viruses. Here we report a strategy for regulating the co-assembly of nonviral proteins and nucleic acids into highly ordered nucleocapsids in vitro. By fusing maltose binding protein to the subunits of NC-4, an engineered protein cage that encapsulates its own encoding mRNA, we successfully blocked spontaneous capsid assembly, allowing isolation of the individual monomers in soluble form. To initiate RNA-templated nucleocapsid formation, the steric block can be simply removed by selective proteolysis. Analyses by transmission and cryo-electron microscopy confirmed that the resulting assemblies are structurally identical to their RNA-containing counterparts produced in vivo. Enzymatically triggered cage formation broadens the range of RNA molecules that can be encapsulated by NC-4, provides unique opportunities to study the co-assembly of capsid and cargo, and could be useful for studying other nonviral and viral assemblies.