Brook Trout Populations Research Articles

Evaluating the success of eradicating nonnative Brook Trout using Trojan Y Chromosome fish in southern Rocky Mountain streams

AbstractObjectiveBrook Trout Salvelinus fontinalis often outcompete and displace native salmonids in western North America. Due to the limitations of traditional removal methods, managers are implementing the Trojan Y Chromosome approach to extirpate nonnative Brook Trout populations. However, there are uncertainties of the comparative performance (i.e., survival, reproductive success) of YY‐male (MYY) fish and their wild counterparts. In addition, it is unclear how effective YY‐female (FYY) fish compare with MYY fish for extirpation of wild Brook Trout. To address these uncertainties, we modeled the time to extirpation of wild Brook Trout using 5 years of empirical data, assuming introductions of either MYY or FYY fish.MethodsOur simulations assumed varying stocking (0% to 100%) and removal (0% to 90%) scenarios. In addition, we evaluated model sensitivity to changes in the reproductive success and survival of MYY fish.ResultThe simulations suggest that the average time to extirpation would be 14 years using MYY fish and 8 years for FYY fish, assuming 50% annual removal and 50% initial stocking of the wild Brook Trout abundance. Increasing removal and/or stocking levels resulted in reductions in extirpation times using either MYY or FYY fish. Sensitivity analyses indicated that the model was relatively insensitive to changes in the reproductive success and survival of MYY Brook Trout.ConclusionOur results suggest that either MYY or FYY fish can be used to eradicate wild Brook Trout populations, but FYY fish are likely the most efficient means of eradicating nonnative Brook Trout in streams typical of western North America.

Life's a ditch: demographic history and environmental factors shape fine-scale local adaptation within small populations of brook trout

Many studies have investigated the loss of adaptive potential in endangered or exploited species experiencing recent population declines. Less research has studied adaptive genomic variation in small populations known to have persisted for long periods, despite the unique contribution that such populations provide for determining mechanisms underlying population persistence in evolutionary and conservation modeling. Small populations of Brook trout (Salvelinus fontinalis) have persisted in Cape Race, Newfoundland for >12,000 years. We used genotyping-by-sequencing data to investigate the demographic history and adaptive genomic variation of 26 populations with effective population sizes (Ne) ranging from 11 to 442, and to explore mechanisms underlying long-term persistence. We show that all populations experienced demographic declines following postglacial colonization but have remained in their current, small Ne state for thousands of years. We also reveal greater homozygosity in adaptive alleles within the smallest populations and found signatures of adaptive divergence in small populations relating to several abiotic and biotic factors. Our study illustrates how the demographic history of a species can influence the adaptive dynamics of small populations persisting over long time periods.

Declines in Brook Trout Abundance Linked to Atmospheric Warming in Maryland, USA

Salmonid fishes provide an important indicator of climate change given their reliance on cold water. We evaluated temporal changes in the density of stream-dwelling brook trout (Salvelinus fontinalis) from surveys conducted over a 36-year period (1988–2023) by the Maryland Department of Natural Resources in Eastern North America. Nonparametric trend analyses revealed decreasing densities of adult fish (age 1+) in 19 sites (27%) and increases in 5 sites (7%). In contrast, juvenile fish (age 0) densities decreased in 4 sites (6%) and increased in 10 sites (14%). Declining adult brook trout trends were related to atmospheric warming rates during the study period, and this relationship was stronger than the effects of land use change or non-native brown trout. In contrast, juvenile fish trends generally increased with elevation but were not related to air temperature trends or land use change. Our analysis reveals significant changes in several brook trout populations over recent decades and implicates warming atmospheric conditions in population declines. Our findings also suggest the importance of temperature for adult survival rather than recruitment limitation in brook trout population dynamics.

Estimates of Effective Number of Breeders Identify Drivers of Decline in Mid-Atlantic Brook Trout Populations.

Brook Trout (Salvelinus fontinalis) populations have experienced marked declines throughout their native range and are presently threatened due to isolation in small habitat fragments, land use changes, and climate change. The existence of numerous, spatially distinct populations poses substantial challenges for monitoring population status (e.g., abundance, recruitment, or occupancy). Genetic monitoring with estimates of effective number of breeders (N b) provides a potentially powerful metric to complement existing population monitoring, assessment, and prioritization. We estimated N b for 71 Brook Trout habitat units in mid-Atlantic region of the United States and obtained a mean N b of 73.2 (range 6.90-493). Our modeling approach tested whether N b estimates were sensitive to differences in habitat size, presence of non-native salmonids, base flow index, temperature, acidic precipitation, and indices of anthropogenic disturbance. We found significant support for three of our hypotheses including the positive influences of available habitat and base flow index and negative effect of temperature. Our results are consistent with presently observed and predicted future impacts of climate change on populations of this cold-water fish. Importantly, these findings support the use of N b in population assessments as an index of relative population status.

Brook Trout population response to Brown Trout removal by electrofishing in a Wisconsin Driftless Area stream

Brook Trout population response to Brown Trout removal by electrofishing in a Wisconsin Driftless Area stream

Modeling Full Life-Cycle Effects of Copper on Brook Trout (Salvelinus fontinalis) Populations.

Population models are increasingly used to predict population-level effects of chemicals. For trout, most toxicity data are available on early-life stages, but this may cause population models to miss true population-level effects. We predicted population-level effects of copper (Cu) on a brook trout (Salvelinus fontinalis) population based on individual-level effects observed in either a life-cycle study or an early-life stage study. We assessed the effect of Cu on predicted trout densities (both total and different age classes) and the importance of accounting for effects on the full life cycle compared with only early-life stage effects. Additionally, uncertainty about the death mechanism and growth effects was evaluated by comparing the effect of different implementation methods: individual tolerance (IT) versus stochastic death (SD) and continuous versus temporary growth effects. For the life-cycle study, the same population-level no-observed-effect concentration (NOECpop) was predicted as the lowest reported individual-level NOEC (NOECind; 9.5 µg/L) using IT. For SD, the NOECpop was predicted to be lower than the NOECind for young-of-the-year and 1-year-old trout (3.4 µg/L), but similar for older trout (9.5 µg/L). The implementation method for growth effects did not affect the NOECpop of the life-cycle study. Simulations based solely on the early-life stage effects within the life-cycle study predicted unbounded NOECpop values (≥32.5 µg/L), that is, >3.4 times higher than the NOECpop based on all life-cycle effects. For the early-life stage study, the NOECpop for both IT and SD were predicted to be >2.6 times higher than the lowest reported NOECind. Overall, we demonstrate that effects on trout populations can be underestimated if predictions are solely based on toxicity data with early-life stages. Environ Toxicol Chem 2024;43:1662-1676. © 2024 SETAC.

Genetic predictors of population resilience: A case study of native Brook Trout in headwater streams

AbstractObjectivePopulations of eastern Brook Trout Salvelinus fontinalis face threats from several sources, such as habitat fragmentation, climate change, and competition with introduced salmonids. As a native species, understanding how these populations will respond to disturbances is paramount to their management and effective conservation. A population's ability to respond to disturbance, its resilience, is influenced by several factors. One such group of factors is population genetics.MethodsWe calculated population resilience metrics based on transient dynamics using population projection matrix models. Long‐term demographic data from 23 headwater stream Brook Trout populations were used to parameterize models. Genetic data were collected, and genetic indices were calculated. Partial redundancy analysis was then used to evaluate relationships between resilience metrics and genetic indices.ResultInbreeding coefficient, rarefied allelic richness, pairwise genetic differentiation (FST), and effective population size were all found to be important variables in predicting resilience.ConclusionOur results suggest that genetic isolation may increase the demographic resilience in Brook Trout through faster generation times and higher juvenile survival, but this likely comes at the cost of increased extinction risk and truncated size structures. Genetic indices can provide insight into gene flow between populations, thus the relationship between population connectivity and resilience. Given the importance of connectivity to population resilience, restoring and maintaining movement corridors could affect resilience in headwater Brook Trout populations.

Thermal stressors during embryo incubation have limited ontogenic carryover effects in brook trout

Winter climate is changing rapidly in northern latitudes, and these temperature events have effects on salmonid thermal biology. Stressors during winter egg incubation could reduce hatching success and physiological performance of fall-spawning fishes. Here we quantified the potential for ontogenic carryover effects from embryonic thermal stress in multiple wild and hatchery-origin populations of brook trout (Salvelinus fontinalis), a temperate ectotherm native to northeastern North America. Fertilized eggs from four populations were incubated over the winter in the laboratory in four differing thermal regimes: ambient stream-fed water, chronic warming (+2 °C), ambient with a mid-winter cold-shock, and short-term warming late during embryogenesis (to stimulate an early spring). We examined body size and upper thermal tolerance at the embryonic, fry (10 weeks post-hatch and 27–30 weeks post-hatch) and gravid adult (age 2+) life stages (overall N = 1482). In a separate experiment, we exposed developing embryos to acute seven-day heat stress events immediately following fertilization and at the eyed-egg stage, and then assessed upper thermal tolerance (CTmax) 37 weeks post-hatch. In all cases, fish were raised in common garden conditions after hatch (i.e., same temperatures). Our thermal treatments during incubation had effects that varied by life stage, with incubation temperature and life stage both affecting body size and thermal tolerance. Embryos incubated in warmer treatment groups had higher thermal tolerance; there was no effect of the mid-winter melt event on embryo CTmax. Ten weeks after hatch, fry from the ambient and cold-shock treatment groups had higher and less variable thermal tolerance than did the warmer treatment groups. At 27–30 post-hatch and beyond, differences in thermal tolerance among treatment groups were negligible. Collectively, our study suggests that brook trout only exhibit short-term carryover effects from thermal stressors during embryo incubation, with no lasting effects on phenotype beyond the first few months after hatch.

Variation in resting respiration rate of Brook Trout among source populations: Implications for bioenergetic models

AbstractObjectiveOur objective was to compare wild and hatchery sourced Brook Trout Salvelinus fontinalis to determine the importance of source population on routine respiration rate (RRR), the major cost term in bioenergetic models.MethodsWe evaluated intraspecific variation in RRRs of one hatchery and four wild Brook Trout populations. Hatchery fish were obtained from the Bowden State Fish Hatchery in Elkins, West Virginia, and were the basis for the previously published bioenergetics model for the species. Wild fish were obtained from four headwater streams in West Virginia. Using intermittent respirometry, we measured and analyzed RRRs sequentially at 20, 16, and 12°C. Measures on hatchery fish were censored to restrict the dataset to similar sizes and temperatures as used with the wild populations. We used a suite of mixed effects models and one linear model to compare RRRs of hatchery fish with wild fish, as well as to determine whether wild populations differed.ResultWe found that the RRR of hatchery fish was double that of wild fish over the range of 12–20°C. Within the wild populations, the RRR of the Potomac drainage fish was lower than two of the three Ohio drainage populations despite all steams falling within 55 km of each other.ConclusionOur findings suggest that selective pressures at the hatchery, as well as factors that influence thermal regimes in wild populations, likely influence RRR in Brook Trout. More research is needed to identify correlates related to intraspecific variation in fish respiration rates. Most fish bioenergetics models are not based on, or calibrated to, the specific population to which they are applied. Therefore, we encourage greater efforts be expended to calibrate and validate such models in the future.

Genetic structure of restored Brook Trout populations in the Southern Appalachian Mountains indicates successful reintroductions

Genetic structure of restored Brook Trout populations in the Southern Appalachian Mountains indicates successful reintroductions

Climate warming and projected loss of thermal habitat volume in lake populations of brook trout

We applied an ensemble of climate warming models to an iconic protected landscape (Algonquin Park, Ontario) and the seasonal temperature profile model for lakes to assess changes in brook trout ( Salvelinus fontinalis) thermal habitat volume (THV) among lakes of different sizes in 30-year periods under two climate warming scenarios (RCP 4.5 and 8.5). Bayesian beta regression models show that lake size (surface area) and morphometry (dynamic lake ratio) are important factors in THV loss. THV loss increases as a function of the dynamic lake ratio (transition from bowl-shaped to dish-shaped lakes). The magnitude of this effect depends on the lake size category and the RCP scenario. Small (<100 ha) and medium (100–500 ha) dish-shaped lakes are projected to have greater THV loss in 2071–2100 (60%–100% of brook trout THV under RCP 8.5; 40%–70% under RCP 4.5) than large lakes (>500 ha) of similar shape. Climate warming projections for the balance of this century, regardless of the RCP category, will result in the loss of brook trout THV in lakes that range widely in size and morphometry.

Microgeographic variation in demography and thermal regimes stabilize regional abundance of a widespread freshwater fish.

Predicting the persistence of species under climate change is an increasingly important objective in ecological research and management. However, biotic and abiotic heterogeneity can drive asynchrony in population responses at small spatial scales, complicating species-level assessments. For widely distributed species consisting of many fragmented populations, such as brook trout (Salvelinus fontinalis), understanding the drivers of asynchrony in population dynamics can improve the predictions of range-wide climate impacts. We analyzed the demographic time series from mark-recapture surveys of 11 natural brook trout populations in eastern Canada over 13 years to examine the extent, drivers, and consequences of fine-scale population variation. The focal populations were genetically differentiated, occupied a small area (~25 km2 ) with few human impacts, and experienced similar climate conditions. Recruitment was highly asynchronous, weakly related to climate variables and showed population-specific relationships with other demographic processes, generating diverse population dynamics. In contrast, individual growth was mostly synchronized among populations and driven by a shared positive relationship with stream temperature. Outputs from population-specific models were unrelated to four of the five hypothesized drivers (recruitment, growth, reproductive success, phylogenetic distance), but variation in groundwater inputs strongly influenced stream temperature regimes and stock-recruitment relationships. Finally, population asynchrony generated a portfolio effect that stabilized regional species abundance. Our results demonstrated that population demographics and habitat diversity at microgeographic scales can play a significant role in moderating species responses to climate change. Moreover, we suggest that the absence of human activities within study streams preserved natural habitat variation and contributed to asynchrony in brook trout abundance, while the small study area eased monitoring and increased the likelihood of detecting asynchrony. Therefore, anthropogenic habitat degradation, landscape context, and spatial scale must be considered when developing management strategies to monitor and maintain populations that are diverse, stable, and resilient to climate change.

Stream groundwater inputs generate fine‐scale variation in brook trout phenology and growth across a warming landscape

Abstract Climate change is increasing global atmospheric temperatures, which can reduce abundance and cause range shifts in species that are sensitive to warming. However, fine‐scale thermal heterogeneity can drive highly variable local responses to climate change, especially in freshwater environments that differ in groundwater inputs and geomorphology. We used temperature data collected during 2012–2021 from 10 small, pristine streams in eastern Canada to characterise thermal variation at a small spatial scale (~25 km2). We then used relationships between daily air and stream temperatures to reconstruct stream temperature since 1980, and assessed how thermal variation influenced the phenology and growth of brook trout (Salvelinus fontinalis). Air–stream temperature relationships varied considerably among streams despite their close proximity, with predicted summer temperatures differing up to 9.5°C between warmer rainfall‐dominated streams and cooler groundwater‐dominated streams. Rainfall‐dominated streams warmed more than twice as fast as groundwater‐dominated streams across all seasons since 1980, with nearly four‐fold differences in rates of warming evident during summer months. Fine‐scale thermal heterogeneity also shaped brook trout phenology, as juveniles in rainfall‐dominated streams were estimated to hatch and emerge much later (~70 and 40 days, respectively) and experience faster phenological shifts than in groundwater‐dominated streams. Relationships between juvenile brook trout size and accumulated degree‐days were positive, but slopes differed over two‐fold and did not vary systematically based on stream hydrology, suggesting more idiosyncratic impacts of warming on early growth. Collectively, our study illustrates how species responses to climate change in freshwater environments can be consistent in direction but vary substantially in magnitude owing to the influence of groundwater. Future climate change is likely to increase the thermal stress experienced by brook trout populations in warmer rainfall‐dominated streams, while potentially benefiting those in groundwater‐dominated streams where current temperatures are often suboptimal. Observed differences in the rates and ecological impacts of warming among streams suggest that fine‐scale thermal variation must be considered when forecasting effects of future climate change on stream fish population dynamics.

No evidence of sustained recovery of native trout in response to angling suppression of invasive Brook Trout

AbstractObjectiveNonnative fish invasions have had widespread impacts on freshwater ecosystems, including effects on native fish biodiversity and persistence. Brook Trout Salvelinus fontinalis were first introduced into the Elbow River watershed (Alberta, Canada) in the 1940s. They have since become established in Quirk Creek, and they dominated the fish community by the mid‐1990s, raising concern about the native populations of Westslope Cutthroat Trout Oncorhynchus clarkii lewisi and Bull Trout S. confluentus.MethodsA targeted angling program was operated from 1998 to 2015, along with limited electrofishing removals, to suppress the Brook Trout population. We used 25 years of fish monitoring data from 1978 to 2020 to evaluate the program's effectiveness for reducing the Brook Trout population and the program's consequences for native trout.ResultDensities of Brook Trout larger than 150 mm declined after the onset of the suppression project, and the decline was attributed to removals through angling. However, Brook Trout recruitment remained comparable to presuppression levels. Westslope Cutthroat Trout recruitment increased during and after Brook Trout suppression. Densities of Westslope Cutthroat Trout larger than 150 mm increased during the suppression period but did not reach density goals targeted for recovery of the species. Bull Trout remained at very low densities throughout the suppression project.ConclusionThe lack of native trout recovery during the suppression project was hypothesized to result from (1) incidental release mortality of native trout, (2) Brook Trout suppression that was insufficient to prompt an effective response in native trout populations, or (3) a combination of these factors. Continued low densities of Brook Trout larger than 150 mm and native trout after the end of the suppression project (when harvest and incidental release mortality were alleviated) may point to some other factor impacting the recovery of trout larger than 150 mm, particularly Westslope Cutthroat Trout, since recruitment was at its highest during this period. Overall, angling was not considered an effective method for promoting native trout recovery, and other techniques should be pursued depending on management goals.

Assessing the suitability of YY males and ZZ females as an invasive species population control method across life histories

Natural resource managers use tools to control invasive species. In theory, stocking YY males or ZZ females would allow managers to skew sex ratios until populations collapse. In combination with other suppression methods, such as removal, this approach could be incorporated into Integrated Pest Management plans. For example, fishery managers have stocked YY males to control isolated non-native brook trout (Salvelinus fontinalis) populations. However, life histories and demographic factors (e.g., lifespans) vary across species and could affect the feasibility of skewing sex ratios as an effective control strategy for a given population. Likewise, some species may have sex determinations that do not allow population control through sex-skewing methods. We compared five representative aquatic invasive species with global invasion ranges for potential control by skewing the sex ratio through closed population simulations: red swamp crayfish (Procambarus clarkii), zebra mussels (Dreissena polymorpha), lake trout (Salvelinus namaycush), silver carp (Hypophthalmichthys molitrix), and Nile tilapia (Oreochromis niloticus). We determined that Nile tilapia, red swamp crayfish, and zebra mussels would be the most suitable to control through skewing the sex ratio assuming appropriate sex determination exists in the species. Lake trout could be eliminated by stocking YY males but would require either long stocking periods or high stocking numbers because of the long lifespan of the species. Silver carp populations were more difficult to crash because they live longer and produce many recruits. Broadly, these patterns demonstrated that short lived species lend themselves to control by skewing the sex ratio.

Genetic analysis reveals a complex mosaic of admixture in Brook Trout in a historically fragmented watershed

AbstractObjectiveAssess how historical fragmentation in the form of perched culverts impacts Brook Trout Salvelinus fontinalis genetic diversity and differentiation in the Beebe River watershed (central New Hampshire), the site of a major culvert removal project in 2017.MethodsWe collected genetic samples from Brook Trout one year prior to (2016), and two years following (2018 and 2019) culvert removal from six tributaries in the watershed. We used two analytical approaches, STRUCTURE and discriminant analysis of principal components, to determine the degree to which admixture was occurring and the levels of genetic diversity in the sampled populations. We also compared pairwise FST values to measure the genetic differentiation between tributaries.ResultThe analysis revealed that the tributaries with impassable culverts (GR1, GR3, and GR5) exhibited a distinct genetic cluster, indicating genetic homogeneity. In contrast, the tributaries without barriers (GR2, ECR1, and GR4) showed a mixture of individuals assigned to multiple genetic clusters, indicating genetic admixture and high diversity. Culvert outlet drop heights correlated with the level of genetic differentiation and diversity. Culvert replacement did not immediately result in significant changes in the genetic composition of the Brook Trout populations. Fish in tributaries with culverts remained genetically distinct from those in other tributaries even two years after culvert removal.ConclusionThe study demonstrates that historical fragmentation caused by culverts has influenced the population genetic structure of Brook Trout in the Beebe River watershed. Culvert replacement did not lead to immediate changes in genetic composition, suggesting that other factors, such as prespawning behavior and geomorphological disturbances, may have limited fish movement and spawning after culvert removal. The findings highlight the importance of considering the specific characteristics of culverts and their interactions with habitat conditions in assessing their impacts on genetic connectivity.

Sources of coaster brook trout (Salvelinus fontinalis) revealed by genomic analysis of brook trout populations along Minnesota’s shoreline with Lake Superior

Knowledge of population-level relationships and how these relationships pertain to different life history forms is critical to developing effective management plans for native trout, char, and salmon. In the Lake Superior basin, identifying effective restoration strategies for coaster brook trout (Salvelinus fontinalis), a lake-inhabiting form of brook trout, is hampered by limited information on genetic connectivity and source-sink dynamics among brook trout populations. Here, we infer these relationships by surveying 8,178 single nucleotide polymorphisms in 234 brook trout from seven rivers along the Minnesota shoreline with Lake Superior, including from reaches above and below natural waterfalls that prevent upstream movement. We identified well-differentiated above-barrier populations that supply brook trout to below-barrier reaches. We also compared within-river brook trout to 26 coaster brook trout from Lake Superior. We identified at least four source populations for these coaster brook trout, three of which were located within rivers. Additionally, we estimated NE for within-river populations and detected a decline across recent generations, with the most recent estimates approaching critical thresholds. Finally, comparisons with 94 domestic brook trout representing nine hatchery strains revealed a lack of domestic introgression into wild populations, demonstrating the importance of natural reproduction to population persistence. Our results offer novel insights into sources of coaster brook trout and highlight the role of within-river populations in supporting the coaster life history. Management efforts focused on instream restoration may be more important to rehabilitating coaster brook trout than previously thought and are urgently needed given the population-level conservation status reported here.

Is now the time? Review of genetic rescue as a conservation tool for brook trout.

Brook trout populations have been declining throughout their native range in the east coast of the United States. Many populations are now distributed in small, isolated habitat patches where low genetic diversity and high rates of inbreeding reduce contemporary viability and long-term adaptive potential. Although human-assisted gene flow could theoretically improve conservation outcomes through genetic rescue, there is widespread hesitancy to use this tool to support brook trout conservation. Here, we review the major uncertainties that have limited genetic rescue from being considered as a viable conservation tool for isolated brook trout populations and compare the risks of genetic rescue with other management alternatives. Drawing on theoretical and empirical studies, we discuss methods for implementing genetic rescue in brook trout that could yield long-term evolutionary benefits while avoiding negative fitness effects associated with outbreeding depression and the spread of maladapted alleles. We also highlight the potential for future collaborative efforts to accelerate our understanding of genetic rescue as a viable tool for conservation. Ultimately, while we acknowledge that genetic rescue is not without risk, we emphasize the merits that this tool offers for protecting and propagating adaptive potential and improving species' resilience to rapid environmental change.

Streamwide Evaluation of Survival and Reproduction of MYY and Wild Brook Trout Populations

AbstractBrook Trout Salvelinus fontinalis have been introduced across the western USA, where the species competes with and often replaces native salmonids. Nonnative Brook Trout are difficult to eradicate; thus, new removal strategies are needed. One novel methodology couples the partial suppression of wild Brook Trout with the replacement of MYY Brook Trout (males with two Y chromosomes). If MYY fish survive to reproduce with wild female Brook Trout, their progeny will be 100% male, which eventually shifts the sex ratio and theoretically extirpates the population. However, the effectiveness of this approach depends on survival and reproduction of MYY fish relative to the surviving wild conspecifics. From 2018 to 2020, we annually removed an estimated 45.7% of wild Brook Trout from three streams in New Mexico and stocked fingerling MYY Brook Trout (mean TL = 94 mm; range = 61–123 mm) targeting 50.0% of wild annual abundance estimates. Annual survival for MYY and wild Brook Trout was similar in Leandro Creek (MYY = 0.63 and wild = 0.63) and Rito de los Piños (MYY = 0.37 and wild = 0.46) but differed in Placer Creek (MYY = 0.28 and wild = 0.75). During spawning, we evaluated the reproductive potential of MYY Brook Trout by comparing the percentage of sexually mature male Brook Trout comprised of MYY fish to the percentage of hybrid (MYY × wild) F1 progeny. By the second spawning season (2019), MYY fish comprised 59.8, 50.4, and 34.5% of milt‐producing Brook Trout, which resulted in 55.1, 33.3, and 0% hybrid progeny in Leandro Creek, Rito de los Piños, and Placer Creek, respectively. We demonstrated that MYY fish exhibit similar vital rates compared with wild conspecifics in two of three streams; however, differences among streams highlights unforeseen variables that influence MYY survival and reproduction. The study offers promising results of the MYY approach for potentially eradicating unwanted Brook Trout populations.

Detection of brook trout in spatiotemporally separate locations using validated eDNA technology

Brook trout are a species of conservation concern in Southwestern Ontario, Canada, and effective monitoring of their populations is crucial for making informed management decisions. Electrofishing is a traditional, yet invasive, method that allows for fish abundance estimation. Environmental DNA (eDNA) is an emerging molecular tool that presents a non-invasive alternative to electrofishing. This study was a collaborative effort between researchers in academia, industry, and an NGO, with the following objectives: 1) compare eDNA detections with electrofishing when monitoring brook trout populations in a site of known occupancy, 2) compare existing eDNA collection methods, and 3) extend eDNA surveys to regions of unknown occupancy that could be of conservation concern (Hanlon Creek and Twelve Mile Creek, Ontario). First, eDNA sampling methods were validated with standard electrofishing. Water samples were filtered in tandem at each site using two commercially available eDNA samplers. The results suggest a significant difference in total eDNA capture and incidence of PCR inhibitors between the two autosamplers. Brook trout eDNA was detected at all locations in Hanlon Creek in September and November, as well as 5/6 sampling locations in Twelve Mile Creek. Brook trout signal in Hanlon Creek was stronger in November compared to September 2019, suggesting possible spawning activity. Brook trout eDNA was also detected in Twelve Mile Creek where brook trout were previously unreported. This study provides a technical validation for the use of eDNA in brook trout monitoring and illustrates the opportunity to use eDNA surveys in regulated settings to complement and improve conventional biomonitoring methods for the management of elusive species.