Efficiency Of Biological Pump Research Articles

Modeling the Responses of Phytoplankton Assemblage and Biological Pump Efficiency to Environmental Changes in the Chukchi Borderland, Western Arctic Ocean

AbstractThe Chukchi Borderland, connecting the Chukchi continental shelf and the Canada Basin, has become a hotspot for studying how ecosystems respond to rapid environmental changes in the Arctic Ocean. Based on a long‐term hindcast simulation during 1998–2015 using a coupled ocean‐sea ice‐biogeochemical model, this study investigates the responses of phytoplankton assemblage and the biological carbon pump efficiency within the upper layers (0–100 m) of the Chukchi Borderland. The nitrate concentration is found to be a crucial factor controlling the total phytoplankton biomass and determining the spatiotemporal variations in the evolution pattern of phytoplankton assemblage. In the shelf break adjacent region, nitrate concentration increased after 2009, boosting phytoplankton biomass with diatoms persistently dominating. In the Canada Basin adjacent region, the westward expansion of the Beaufort Gyre after 2009 extended the influence of oligotrophic water, leading to phytoplankton miniaturization and a shift in phytoplankton assemblage evolution, from a pre‐2009 pattern that non‐diatoms at start were succeeded by diatoms, to a post‐2009 scenario that non‐diatoms dominated throughout the growing season. The biological pump efficiency evidently increased in the shelf break region after 2009, due to heightened biomass and intensified horizontal advection‐induced particulate organic carbon (POC) supply. The western Canada Basin adjacent region presented the reduced primary production and vertical POC flux. However, the deeper nitracline deepened the phytoplankton habitat, shortening POC residence time in the upper layers and enhancing the biological pump efficiency.

Organic matter composition in sediments recording sea surface phytoplankton community structure in Prydz Bay of Antarctica

The coastal zones in Antarctica play an important role in the polar carbon cycle through the efficiency of the biological pump. In this study, Prydz Bay in East Antarctica was selected to investigate factors controlling organic matter composition in sediments using source-dependent biomarkers. The results show that fatty acids are the most abundant biomarkers in sediments, followed by sterols, fatty alcohols, and alkanes. Although microalgae are well known to be the main source of sedimentary organic matter in Prydz Bay, the distribution of low molecular weight branched alkanes and alkenes with an even–odd predominance suggest the importance of bacteria during organic matter transformation, and its contribution to sedimentary organic matter. High concentrations of highly branched isoprenoid alkenes (HBIs) with a distinctive enriched 13C signature indicate substantial inputs of ice algae to sediments. Principal component analysis of source-dependent biomarkers reveals that the spatial heterogeneity of organic composition in sediments of Prydz Bay is mainly controlled by the distribution of sea surface phytoplankton community in different geographical zones. Redundancy analysis demonstrates that seasonal sea-ice cover is the main driver for blooms of distinctive algae in each geographical zone as a result of spatial succession of the phytoplankton community. The result clearly exhibits that, at least in Prydz Bay, spatial succession of the sea surface phytoplankton community in austral summer can be recorded in sediments, suggesting that a high-resolution sediment record of source-dependent biomarkers can be used to reconstruct the evolution of sea surface phytoplankton community structure during geological history in Antarctic coastal zones.

The effects of bathymetry on the long-term carbon cycle and CCD

The shape of the ocean floor (bathymetry) and the overlaying sediments provide the largest carbon sink throughout Earth's history, supporting ~one to two orders of magnitude more carbon storage than the oceans and atmosphere combined. While accumulation and erosion of these sediments are bathymetry dependent (e.g., due to pressure, temperature, salinity, ion concentration, and available productivity), no systemic study has quantified how global and basin scale bathymetry, controlled by the evolution of tectonics and mantle convection, affects the long-term carbon cycle. We reconstruct bathymetry spanning the last 80 Myr to describe steady-state changes in ocean chemistry within the Earth system model LOSCAR. We find that both bathymetry reconstructions and representative synthetic tests show that ocean alkalinity, calcite saturation state, and the carbonate compensation depth (CCD) are strongly dependent on changes in shallow bathymetry (ocean floor ≤600 m) and on the distribution of the deep marine regions (>1,000 m). Limiting Cenozoic evolution to bathymetry alone leads to predicted CCD variations spanning 500 m, 33 to 50% of the total observed variations in the paleoproxy records. Our results suggest that neglecting bathymetric changes leads to significant misattribution to uncertain carbon cycle parameters (e.g., atmospheric CO2 and water column temperature) and processes (e.g., biological pump efficiency and silicate-carbonate riverine flux). To illustrate this point, we use our updated bathymetry for an Early Paleogene C cycle case study. We obtain carbonate riverine flux estimates that suggest a reversal of the weathering trend with respect to present-day, contrasting with previous studies, but consistent with proxy records and tectonic reconstructions.

Bacterial magnetofossil evidence for enhanced Pacific Ocean respired carbon storage during buildup of Antarctic glaciation

Global cooling with the onset of Antarctic glaciation ca. 34 Ma across the Eocene–Oligocene transition (EOT) terminated the early Cenozoic greenhouse climate state and marked the beginning of icehouse conditions. Although a pCO2 decline is considered to have been a major cause of this climate shift, the associated carbon-sequestration mechanism remains unclear. Here, we assessed ocean production and circulation changes across the EOT using numerical simulations combined with a novel proxy, namely, bacterial magnetofossils, the abundance and morphology of which are sensitive to sedimentary organic matter accumulation and oxygenation. We detected production and oxygenation declines in the equatorial Pacific Ocean coeval with increased biological production in the Southern Ocean after the EOT. Corroborated by simulation results and evidence from the Subantarctic region, we interpret this counterintuitive combination as a result of enhanced bottom-water formation and biological pump efficiency in the Southern Ocean due to Antarctic glacial buildup across the EOT. These results provide key evidence for deep Pacific Ocean deoxygenation and increased respired carbon concentrations, which amplified CO2 decline across the EOT.

Response of the calcareous nannofossils to the Cretaceous-Paleogene boundary event: A case study from Sinai, Egypt

A detailed study of calcareous nannofossils was conducted on a well-exposed succession encompassing the Cretaceous-Paleogene (K-Pg) boundary interval at Wadi Nukhul, Sinai, Egypt, as a part of the southern Tethyan margin. The nannofossil biostratigraphic data show that the Nukhul succession sustains a complete K-Pg boundary interval. The nannofossil assemblage indicates a shift from cool/oligo-mesotrophic conditions in the late Maastrichtian Micula murus Zone to warm/oligotrophic in the latest Maastrichtian M. prinsii Zone prior to the K-Pg boundary. At the K-Pg boundary, diversity, and total abundance of the calcareous nannofossils remarkably decreased signifying unstable marine conditions. The post-impact assemblage (lowermost part of NP1 Zone) was marked by acme of Cervisiella operculata indicating oligotrophic conditions in the photic zone related to the diminished of the marine primary producers in the lowermost Danian. At the upper portion of the NP1 Zone, the assemblage is still dominated by C. operculata, besides the successive occurrence of the small-sized incoming Paleocene taxa Biantholithus sparsus and Neobiscutum romeinii. This pattern was accompanied by increased frequencies of Zeugrhabdotus sigmoides indicating stressful cool/meso-eutrophic surface water conditions signify the initial recovery interval. Upward in the early Danian NP2-NP3 zones, the nannofossil species diversity and total abundance progressively increased. Also, the nannofossil assemblage characterized by the existence of the new Paleocene oligotrophic indicators like Cruciplacolithus primus, Coccolithus pelagicus, and Ericsonia subpertusa. This probably indicates a tendency toward rebuilding of the biological pump efficiency and, therefore, a full recovery phase was resumed.

Southern Ocean Biological Pump Role in Driving Holocene Atmospheric CO2: Reappraisal

AbstractChanges in Southern Ocean biological pump efficiency are frequently invoked as a source of glacial/interglacial CO2 variability. It was recently suggested that Southern Ocean biological pump weakening also contributed to Holocene CO2 increase. Here we test the causes and downstream effects of biological pump inefficiency during the Holocene. We first provide evidence that a southward shift of the South Westerly Winds, was likely the cause of increasing upwelling in the Southern Ocean leading to local biological pump weakening as reflected in fossil‐bound δ15N. We then introduce a series of ultra‐high resolution (6 m/ky) productivity records from the Chilean Margin to determine the fate of Southern Ocean nutrients. A compilation of records from Pacific sites supports export and complete consumption of preformed Southern Ocean nutrients, which might have reduced the contributions of Southern Ocean marine source to the Holocene increase in atmospheric CO2.

Hypoxia-tolerant zooplankton may reduce biological carbon pump efficiency in the Humboldt current system off Peru

In the ocean, downward flux of particles produced in sunlit surface waters is the major component of the biological carbon pump, which sequesters atmospheric carbon dioxide and fuels deep-sea ecosystems. The efficiency of downward carbon transfer is expected to be particularly high in tropical upwelling systems where hypoxia occurring beneath the productive surface waters is thought to hamper particle consumption. However, observations of both particle feeders and carbon export in low-oxygen waters are scarce. Here, we provide evidence that hypoxia-tolerant zooplankton feed on sinking particles in the extensive Oxygen Minimum Zone (OMZ) off Peru. Using several arrays of drifting sediment traps and in situ imaging, we show geochemical and morphological transformations of sinking particles and substantial control of carbon export by zooplankton. Our findings challenge the assumption of a consistently efficient biological carbon pump in OMZs and further demonstrate the need to consider mesopelagic organisms when studying oceanic carbon sequestration.

Paleoproductivity and deep-sea oxygenation in Cosmonaut Sea since the last glacial maximum: impact on atmospheric CO2

The paleoproductivity in the Southern Ocean plays a crucial role in controlling the atmospheric CO2 concentration. Here, we present the sediment record of gravity core ANT37-C5/6-07, which was retrieved from the Cosmonaut Sea (CS), Indian Ocean sector of the Southern Ocean. We found that the change in the oxygen concentration in the CS bottom water is strongly correlated with the atmospheric CO2 fluctuations since the Last Glacial Maximum (LGM). Based on the change in the export production, we reconstructed the evolution history of the deep-water ventilation/upwelling in the study area. During the LGM, a large amount of respiratory carbon was stored in the deep Southern Ocean due to the effect of the low export productivity and restricted ventilation. The oxygen concentration was also low at this time. Despite the increase in paleoproductivity, the biological pump efficiency remained at a low level during the Last Deglaciation. Vast quantities of CO2 were released into the atmosphere through enhanced upwelling. The recovery of ventilation during this period facilitated the supply of oxygen-rich surface water to the deep ocean. Moreover, signals were identified during the transitions between the Heinrich Stage 1 (HS1), Antarctic Cold Reverse (ACR), and Younger Drays (YD) periods. During the Holocene, the productivity increased overall, and the oxygen in the bottom water was consumed but still remained at a high level. This may have been caused by the enhanced ventilation and/or the prevalence of East Cosmonaut Polynya (ECP) near Cape Ann.

GOBAI-O2: temporally and spatially resolved fields of ocean interior dissolved oxygen over nearly 2 decades

Abstract. For about 2 decades, oceanographers have been installing oxygen sensors on Argo profiling floats to be deployed throughout the world ocean, with the stated objective of better constraining trends and variability in the ocean's inventory of oxygen. Until now, measurements from these Argo-float-mounted oxygen sensors have been mainly used for localized process studies on air–sea oxygen exchange, upper-ocean primary production, biological pump efficiency, and oxygen minimum zone dynamics. Here, we present a new four-dimensional gridded product of ocean interior oxygen, derived via machine learning algorithms trained on dissolved oxygen observations from Argo-float-mounted sensors and discrete measurements from ship-based surveys and applied to temperature and salinity fields constructed from the global Argo array. The data product is called GOBAI-O2, which stands for Gridded Ocean Biogeochemistry from Artificial Intelligence – Oxygen (Sharp et al., 2022; https://doi.org/10.25921/z72m-yz67); it covers 86 % of the global ocean area on a 1∘ × 1∘ (latitude × longitude) grid, spans the years 2004–2022 with a monthly resolution, and extends from the ocean surface to a depth of 2 km on 58 levels. Two types of machine learning algorithms – random forest regressions and feed-forward neural networks – are used in the development of GOBAI-O2, and the performance of those algorithms is assessed using real observations and simulated observations from Earth system model output. Machine learning represents a relatively new method for gap filling ocean interior biogeochemical observations and should be explored along with statistical and interpolation-based techniques. GOBAI-O2 is evaluated through comparisons to the oxygen climatology from the World Ocean Atlas, the mapped oxygen product from the Global Ocean Data Analysis Project and to direct observations from large-scale hydrographic research cruises. Finally, potential uses for GOBAI-O2 are demonstrated by presenting average oxygen fields on isobaric and isopycnal surfaces, average oxygen fields across vertical–meridional sections, climatological seasonal cycles of oxygen averaged over different pressure layers, and globally integrated time series of oxygen. GOBAI-O2 indicates a declining trend in the oxygen inventory in the upper 2 km of the global ocean of 0.79 ± 0.04 % per decade between 2004 and 2022.

Impact of iron fertilisation on atmospheric CO2 during the last glaciation

Abstract. While several processes have been identified to explain the decrease in atmospheric CO2 during glaciations, a better quantification of the contribution of each of these processes is needed. For example, enhanced aeolian iron input into the ocean during glacial times has been suggested to drive a 5 to 28 ppm atmospheric CO2 decrease. Here, we constrain this contribution by performing a set of sensitivity experiments with different aeolian iron input patterns and iron solubility factors under boundary conditions corresponding to 70 000 years before present (70 ka), a time period characterised by the first observed peak in glacial dust flux. We show that the decrease in CO2 as a function of Southern Ocean iron input follows an exponential decay relationship. This exponential decay response arises due to the saturation of the biological pump efficiency and levels out at ∼21 ppm in our simulations. We show that the changes in atmospheric CO2 are more sensitive to the solubility of iron in the ocean than the regional distribution of the iron fluxes. If surface water iron solubility is considered constant through time, we find a CO2 drawdown of ∼4 to ∼8 ppm. However, there is evidence that iron solubility was higher during glacial times. A best estimate of solubility changing from 1 % during interglacials to 3 % to 5 % under glacial conditions yields a ∼9 to 11 ppm CO2 decrease at 70 ka, while a plausible range of CO2 drawdown between 4 to 16 ppm is obtained using the wider but possible range of 1 % to 10 %. This would account for ∼12 %–50 % of the reconstructed decrease in atmospheric CO2 (∼32 ppm) between 71 and 64 ka. We further find that in our simulations the decrease in atmospheric CO2 concentration is solely driven by iron fluxes south of the Antarctic polar front, while iron fertilisation elsewhere plays a negligible role.

Spatio-temporal variations in organic carbon composition driven by two different major phytoplankton communities in the Ross Sea, Antarctica

The compositions of organic carbon could be important in determining biological carbon pump efficiency. However, little information on them in relation to each algal assemblage is currently available in the Ross Sea. Here, we investigated the seasonal variations in organic carbon composition and the relative abundance of each organic carbon, including particulate organic carbon (POC), dissolved organic carbon (DOC), and transparent exopolymer particles (TEPs), characterized by different algal groups in the Ross Sea. The average POC and DOC contributions to the total organic carbon (TOC = POC + DOC) were 13.8 ± 3.7 % and 86.2 ± 3.7 % in mid-January 2019 and 20.9 ± 4.1 % and 79.1 ± 4.1 % in February–March 2018, respectively. The carbon content of TEP (TEP-C) contributed 19.6 ± 11.7 % and 4.6 ± 7.0 % of POC and TOC in mid-January and 36.2 ± 14.8 % and 9.0 ± 6.7 % in February–March, respectively. We found that the organic carbon compositions were affected by seasonal variations in the phytoplankton bloom phase, physical characteristics, and phytoplankton community structure. DOC concentrations and contributions to the TOC increased as phytoplankton cells became senescent in mid-January and decreased in February–March when phytoplankton were relatively active. From February–March, the deepened mixed layer depth encouraged TEP formation, subsequently increasing the TEP contributions. Regardless of the sampling season, all organic carbon concentrations per unit Chl-a were significantly higher in P. antarctica–abundant groups. The DOC contributions to the TOC were correspondingly higher at the P. antarctica–abundant stations in mid-January, which indicates that P. antarctica could be also important in the DOC contributions in the Ross Sea. The rapid alteration in environmental characteristics and phytoplankton community structures in the Ross Sea due to climate change could affect the organic carbon pool at the euphotic layer which consequently could determine the efficiency of the biological pump.

A seasonal transition in biological carbon pump efficiency in the northern Scotia Sea, Southern Ocean

The biological carbon pump (BCP) contributes to the oceanic CO2 sink by transferring particulate organic carbon (POC) into the deep ocean. The magnitude and efficiency of the BCP is likely to vary on timescales of days to seasons, however characterising this variability from shipboard observations is challenging. High resolution, sustained observations of primary production and particle fluxes by autonomous vehicles offer the potential to fill this knowledge gap. Here we present a 4 month, daily, 1 m vertical resolution glider dataset, collected in the high productivity bloom, downstream of South Georgia, Southern Ocean. The dataset reveals substantial temporal variability in primary production, POC flux and attenuation. During the pre-bloom peak phase we find high export efficiency, implying minimal heterotrophic POC consumption, i.e. productivity is decoupled from upper ocean remineralisation processes. As the bloom progresses from its peak through its declining phase, export flux decreases, but transfer efficiency within the upper 100 m of the mesopelagic increases. Conversely, transfer efficiency in the lower mesopelagic decreases in the post-bloom phase, implying that the flux attenuation processes operating in the upper and lower mesopelagic are effectively decoupled. This finding underscores an important limitation of using a single parameter, such as Martin's ‘b’, to characterise POC flux attenuation in a given location or season. Frequent pulses of export flux are observed throughout the deployment, indicating decoupling between primary production and the processes driving export of material from the upper ocean. The mechanisms underlying the observed seasonal changes in BCP magnitude and efficiency are unclear, as temperature and oxygen concentration changed minimally, although the nature of the sinking particles changed substantially as the bloom progressed. Our results highlight the difficulty of capturing temporal variability and episodic flux events with traditional shipboard observations, which affects our conceptual understanding of the BCP. The increasing use of autonomous vehicles to observe particle fluxes will be essential to characterising the temporal variability in magnitude and functioning of the BCP.

Changes in deep Pacific circulation and carbon storage during the Pliocene-Pleistocene transition

The global climate has been gradually cooling over the Cenozoic and is punctuated by the intensification of Northern Hemisphere Glaciation (NHG) from the latest Pliocene to earliest Pleistocene (∼3.1–2.5 millions of years ago, Ma). A decline of atmospheric CO2 is supposed as a prerequisite for the NHG, but the associated carbon-cycle processes remain elusive. Here we combine foraminiferal records of neodymium isotope and boron-calcium ratio, and simulations of an Earth system model, to investigate changes in the water-mass composition and carbonate-ion concentration of the deep Pacific Ocean during the NHG. Our proxy records have revealed a significant expansion of southern-sourced waters with increased respired carbon storage into the deep Pacific during the NHG. These changes may be explained by strengthened deep-water formation and biological-pump efficiency in the Southern Ocean due to Antarctic sea-ice growth, as suggested by our model experiments and evidence from the Sub-Antarctic region. These results provide key clues for quantifying the role of the dissolved inorganic carbon content of deep Pacific waters in modulating atmospheric CO2 during the NHG.

The Effects of Atmospheric Nitrogen Deposition on the Marine Ecosystem of the Northern South China Sea

AbstractThe rapid economic developments in countries surrounding the South China Sea have caused a significant increase in the atmospheric deposition of nitrogen (AD‐N) into the ocean. The impact of AD‐N on the regional ecosystem has not been quantitatively assessed, and its driving mechanism has not been explored, either. Here, we applied a one‐dimensional European Regional Seas Ecosystem Model to examine the responses of the ecosystem to AD‐N. The physical‐biological coupled model reproduced the seasonal and interannual variabilities of observed nutrients, chlorophyll a, phytoplankton community structure, and particulate organic carbon (POC) exports at the South East Asia Time‐series Station. Seasonally, the increase of POC flux by AD‐N was most significant in winter, with a ∼2‐month lag behind the associated surface response. It can exist in the following spring, as supported by the larger population size of zooplankton after the previous winter's feeding up. Notably, the ratio of POC export to primary production varied seasonally and interannually, which was controlled by the phytoplankton and zooplankton's size compositions. The surface nutrient input thus caused a significant seasonal change in the biological carbon pump efficiency. Interannually, the modulation of the POC flux by AD‐N was inversely phase‐locked with wind variations. The out‐of‐phase of the surface‐ and subsurface‐nutrient‐driven POC fluxes suggested a potentially more considerable contribution of AD‐N to the total carbon export during years under the weak subsurface influence. This study highlights the importance of AD‐N in the regional ecosystem, which needs a better representation in the present biogeochemical modeling framework.

Proxy‐Based Preformed Phosphate Estimates Point to Increased Biological Pump Efficiency as Primary Cause of Last Glacial Maximum CO2 Drawdown

AbstractUpwelling deep waters in the Southern Ocean release biologically sequestered carbon into the atmosphere, contributing to the relatively high atmospheric CO2 levels during interglacial climate periods. Paleoceanographic evidence suggests this “CO2 leak” was lessened during the last glacial maximum (LGM), potentially due to increased stratification, weaker and equatorward‐shifted winds, and/or enhanced biological carbon export. The collective influences of these mechanisms on the ocean's biological pump efficiency and amount of atmospheric CO2 can be quantified by determining preformed phosphate of deep waters. We quantify preformed PO4 (Ppre,AOU) and preformed () of LGM bottom waters using a compilation of published paleo‐temperature, nutrient and oxygen estimates from benthic foraminifera. Our results show that preformed phosphate of the Pacific and Indian deep oceans was reduced by about −0.53 ± 0.13 μM and suggest that much (64 ± 28 ppmv) of the Glacial‐Interglacial CO2 drawdown resulted from changes in the ocean's biological pump efficiency. Once carbonate compensation is accounted for, this can explain the entire CO2 drawdown (87 ± 40 ppmv). Preformed shows similar results. The reconstructed LGM Ppre,AOU and oxygen are qualitatively consistent with the changes produced by a suite of numerical sensitivity experiments that roughly simulate three proposed mechanisms for an increase in LGM biological pump efficiency: an increase in biological activity, a decrease in wind‐driven upwelling, and an increase in stratification in the Southern Ocean.

Trace elements and stable isotopic geochemistry of two sedimentary sections in the lower Cambrian strata from the Tarim Basin, northwest China: Implications for silicification and biological evolution

Early animal innovations were coupled with profound atmospheric oxidation and oceanic disturbances during the Cambrian explosion; however, the relationship between evolutionary breakthroughs and ocean oxygenation remains controversial. In addition to the sufficiently investigated South China Craton, detailed research on other regions is needed to expand our understanding of ocean oxygenation dynamics and their relationships with animal radiation. Paleoenvironment reconstruction in the Tarim Basin is expected to yield additional contributions to the relevant literature. In this study, rare earth elements, redox-sensitive proxies, organic and inorganic carbon isotopic compositions (δ13CCarb and δ13CKer) of samples from lower Cambrian in the Shiairike and Yaerdangshan Sections of the Tarim Basin were analyzed. Our results showed that the cherts of the studied strata were not directly deposited from hydrothermal fluids but formed in a rather anoxic diagenetic environment where pH drawdown by organic matter degradation facilitated the precipitation of dissolved silica. Yuertusi and Xishanbulake cherts may have derived predominantly from direct seawater precipitation, among which cherts with negative Eu anomalies may have formed near the sulfate–methane transition zone, whereas cherts without Eu anomalies may have formed near the sediment-water interface. The negative δ13CCarb excursion (from 2.47‰ to −11.11‰) detected in the Yuertusi chert unit showed covariations with the enrichment factor of trace elements and other geochemical redox proxies. Therefore, the isotope excursion might be constrained by the anoxic diagenetic pore water and cannot be appropriately utilized for stratigraphic correlation. Multiple geochemical analyses suggest that the Tarim Basin is characterized by a redox-stratified ocean comprising a dynamic oxygenated continental shelf and a persistent anoxic deep basin, which is consistent with the ocean redox structure in South China. Phosphogenesis, enhanced biological pump efficiency and the development of photosynthesis in benthic algae might have comprehensively contributed to the dynamic oxygenation of the marine continental shelf and accelerated the diversification of small shelly fauna in the early Cambrian.

Evaluation of Biological Carbon Pump Metrics in the Subtropical Gulf of Aqaba, Northern Red Sea

AbstractThe oceanic biological carbon pump modulates atmospheric CO2 concentrations by transporting carbon from the sunlit surface to greater depths. The efficiency of the biological pump and its response to warming temperatures are of great importance to future projections of global change. Here, we investigate a time series of organic carbon fluxes from a monthly resolved sediment trap mooring in the Gulf of Aqaba (GOA), northern Red Sea, between 2014 and 2016. We evaluate the attenuation of sinking organic carbon in the context of the seasonally changing euphotic zone and provide the first estimates of biological pump efficiency in this region. The base of the euphotic zone changed seasonally as the system transitioned from oligotrophic and stratified conditions in summer to mesotrophic conditions during the winter mixing period. Carbon attenuation assessed using a power law fit yields an average coefficient of b = 0.80 ± 0.37, lower than expected based on the warm temperatures in the GOA. Estimates of export efficiency decreased from 40% in summer to 20% in winter, and show the opposite seasonal pattern as transfer efficiencies, which increased from 50% in summer to ∼95% in winter. Overall, the efficiency of the carbon pump was close to ∼20% in both seasons. These observations challenge the notion of a globally uniform positive correlation between increasing temperature and increasing carbon attenuation in the ocean and imply that warm subtropical ecosystems can support moderately enhanced carbon pump efficiencies, possibly also related to increased, dust‐driven, mineral ballasting in low latitude regions such as the GOA.

P-Limitation Promotes Carbon Accumulation and Sinking of Emiliania huxleyi Through Transcriptomic Reprogramming

Global warming is expected to cause decreases in nutrient availability, photosynthesis, and potentially carbon export in the ocean. But how, and by what molecular mechanisms, nutrient limitation affects biological pump (BP) efficiency of phytoplankton are poorly understood. Here, using transcriptomics, miRNAomics, and physiological measurements, we report that phosphorus (P)-limitation increased cellular carbon and calcium contents and sinking rate of the cosmopolitan phytoplankton Emiliania huxleyi. Under P-limitation, when photosynthesis was depressed, there were substantial increases in cellular organic (3.4-fold) and inorganic (fivefold) carbon contents due to cell division arrest and, as our transcriptomic data suggest, CO2 incorporation into C4 compounds. Furthermore, calcification was increased by 46% through transcriptional and epigenetic regulations. An increase in sinking rate by 37-44% was detected. Although calcification releases equivalent amounts of CO2, the considerable increase in cellular carbon content and sinking rate far outweighed the CO2 release, leading to an elevated efficiency of carbon export by E. huxleyi, which would partially offset the decrease in BP capacity resulting from lower growth rate under P deficiency. However, how the observed sinking rate and its increase under P limitation on the laboratory cultures will translate into BP efficiency still requires further examination using in situ or mesocosm experiments.

New Perspectives on the Marine Carbon Cycle-The Marine Dissolved Organic Matter Reactivity Continuum.

This perspective challenges our current understanding of the marine carbon cycle, including an alternative explanation of bulk 14C-DOM measurements. We propose the adoption of the carbon reactivity continuum concept previously established for lakes and sediments for the oceans using kinetic data and term this the marine DOM reactivity continuum. We need to gain a fundamental understanding of the biogeochemical drivers of surface water DOM concentrations and reactivity, biological carbon pump efficiency, and the autotrophic communities that are the ultimate but variable sources of marine DOM. This perspective is intended to shift our focus to a more inclusive kinetic model and may lead us to a more accurate assessment of the active and dynamic role marine DOM plays in the global carbon cycle. Currently, the kinetic data to establish and validate such a marine DOM reactivity continuum model are still lacking, and their resolution depends on the discovery of new organic tracers that span large differences in reactivity and microbial degradation rates. We may need to refocus our efforts in deciphering the structure and reactivity of marine organic molecules in a kinetic context, including the microbial and physicochemical constraints on molecular reactivity that are present in the deep ocean.

Fear and loathing in the pelagic: How the seascape of fear impacts the biological carbon pump

AbstractThe biological carbon pump transports photosynthetically fixed carbon from surface waters to depths. It removes carbon from the atmosphere and sequesters it in the deep ocean, playing an important role in global climate regulation. As the biological carbon pump is directly related to biological processes, it is heavily influenced by the biomass and trophic interactions between populations in the ecosystem. However, behavioral responses and adaptations to predation risk change trophic interactions, potentially having larger impacts than direct effects on trophic interactions and population abundances. Thus, predation risk may play an important role in shaping the biological carbon pump's strength (how much carbon leaves the euphotic zone) and efficiency (what fraction of detritus reaches a certain depth without being degraded). Except in the case of active carbon transport by vertically migrating organisms, this role of risk is not generally recognized. Here, we synthesize the existing knowledge on the consequences of anti‐predation responses on the biological carbon pump. First, we consider a generic anti‐predation response and investigate the different direct, indirect, and cascading effects that the response can induce. Then, we focus on pelagic anti‐predation responses and detail how they can specifically alter the different components of the pump. Finally, we discuss points to consider in biological carbon pump studies and highlight directions for future research. In particular, there is a need for more quantitative research to evaluate the importance of anti‐predation responses in shaping the biological carbon pump.