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Characterizing Antarctic fish assemblages using eDNA obtained from marine sponge bycatch specimens

AbstractInternational conservation goals have been set to mitigate Southern Ocean ecosystem deterioration, with multiple monitoring programs evaluating progress towards those goals. The scale of continuous monitoring through visual observations, however, is challenged by the remoteness of the area and logistical constraints. Given the ecological and economic importance of the Southern Ocean, it is imperative that additional biological monitoring approaches are explored. Recently, marine sponges, which are frequently caught and discarded in Southern Ocean fisheries, have been shown to naturally accumulate environmental DNA (eDNA). Here, we compare fish eDNA signals from marine sponge bycatch specimens to fish catch records for nine locations on the continental shelf (523.5–709 m) and 17 from the continental slope (887.5–1611.5 m) within the Ross Sea, Antarctica. We recorded a total of 20 fishes, with 12 fishes reported as catch, 18 observed by eDNA, and ten detected by both methods. While sampling location was the largest contributor to the variation observed in the dataset, eDNA obtained significantly higher species richness and displayed a significantly different species composition compared to fish catch records. Overall, eDNA read count correlated more strongly with fish abundance over biomass. Species composition correlated on a regional scale between methods, however eDNA signal strength was a low predictor of catch numbers at the species level. Our results highlight the potential of sponge eDNA monitoring in the Southern Ocean by detecting a larger fraction of the fish community compared to catch recordings, thereby increasing our knowledge of this understudied ecosystem and, ultimately, aiding conservation efforts.

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The functional ecology of four invasive Ponto–Caspian gobies

Ponto–Caspian gobies are among Europe's most invasive freshwater fish species. These small freshwater and brackish water fish have spread rapidly since the end of the last century, invading the major European river systems, including the Rivers Danube, Rhine, Moselle, Meuse, Vistula, Elbe, Nemunas, Neva, Volga, while also establishing in streams, dam reservoirs, lakes, and artificial canals in 17 European countries. Two species have also successfully established in North America. The contribution of Ponto–Caspian gobies to local fish assemblages varies, but locally they are abundant or dominant components of fish assemblages in invaded ecosystems. We have considered their invasive distribution, range of occupied aquatic environments, abundance, and frequency of occurrence, and summarised their role and position in the trophic webs of invaded ecosystems. We focused on four goby species: western tubenose goby Proterorhinus semilunaris, bighead goby Ponticola kessleri, racer goby Babka gymnotrachelus and monkey goby Neogobius fluviatilis. Based on our own research and other published studies, we described the habitat preferences of these species and assessed their ecological impact on co-occurring species, both native and non-native, as predators, prey, competitors, and as hosts and vectors of parasites.

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Monitoring marine fishes using underwater video techniques in the Mediterranean Sea

The use of underwater video techniques has expanded rapidly in ecological studies and is particularly desirable in protected areas since the method does not impact the habitat or remove fish. The Mediterranean Sea is a biodiversity hotspot under high anthropogenic pressure and consequently, non-destructive and non-extractive techniques for fish monitoring are advantageous. Here, we review 110 publications that used underwater video in fish-related studies in the Mediterranean basin. The most common technique used in the Mediterranean Sea was Remotely Operated Vehicles (ROV) (33%), followed by Remote Underwater Video (RUV) systems (20%), Diver Operated Video (DOV) systems (20%) and Baited Remote Underwater Video (BRUV) systems (19%). Approximately one third of the studies used an additional sampling method, such as fisheries-based or molecular methods with the aim to compare the surveying effectiveness or produce complementary data. The most frequent objectives of the reviewed studies were related to fish community structure, i.e., focusing on community wide metrics such as abundance and biodiversity, or behavioral analyses, while the most commonly studied environments were those of the western Mediterranean and shallow waters, usually involving sandy or rocky reef habitats. Sampling protocols differed widely among studies with transect lengths, soak times and baits all varying. Future research should focus on the least studied parts of the region, such as the eastern and southern Mediterranean Sea and deep-sea habitats. Finally, the development of standardized sampling protocols is recommended to ensure that data are comparable among studies.

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A global review of marine recreational spearfishing

Recreational spearfishing is a fishing method that occurs globally, yet receives considerably less attention in the scientific literature relative to other recreational fishing methods, such as angling. Lack of scientific information on spearfishing may negatively affect the development and management of marine recreational fisheries. We conducted a systematic review of 102 peer-reviewed papers published between 1967 and 2022 pertaining to marine recreational spearfishing. Based on this literature review, we provide an overview of key insights across social, economic, and ecological dimensions of marine recreational spearfishing. While spearfishers represent less than 5% of marine recreational fishers, the participants are younger and may differ from recreational anglers in their motivations, with suggestions of increased well-being generated from a close connection with the sea during underwater fishing. Recreational spearfishers mostly target species of moderate to high levels of vulnerability that are mid to high trophic level carnivores. Though spearfishers can deliberately target larger individuals of exploited populations, this is not a generalizable pattern. Despite a growing body of research on the ecological impacts of marine recreational spearfishing, there is limited knowledge of these effects and their mechanisms across biological levels of organization (e.g., individual, population, community and ecosystem) compared with those of other fishing methods. Recreational spearfishers can contribute to advances in marine ecological knowledge, and inclusive participatory management could represent a key step towards transformative sustainable development of marine recreational spearfishing. Throughout the review, we identify gaps in the research and areas where future research is needed to better inform the socio-economic importance, ecosystem impacts and future management of marine recreational spearfishing.

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Reviewing and improving spatiotemporal modeling approaches for mackerel’s total annual egg production

Since the late 1970s the international ICES mackerel egg survey takes place in the Northeast Atlantic to obtain an estimate of total annual egg production (TAEP), to assess the spawning stock biomass and to support the sustainable management of the mackerel stock. However, its standard calculation of TAEP has some shortcomings: egg production is estimated from arithmetic averages of individual observations regardless whether they are extreme, rarely observed values, and has shown difficulties coping with the spatial expansion of mackerel spawning observed since 2007 (increasing the number of interpolated estimates). Various previous modeling efforts attempted to map the habitat of spawning mackerel to obtain more accurate egg production estimates by using generalized additive models (GAMs). In this study, we review and improve these models by introducing new features: We model both the western and southern components of the mackerel stock with a Tweedie distribution and test more than 400 model forms, including new predictors (like population size) and complex covariate interactions. We select the best model with various metrics, including the score of a tenfold cross validation. Our results show that environmental variables should be included in the model as simple functional, unimodal terms. This leads to a model that is more similar to a generalized linear mixed model than the typical GAM with smoothers. Models including only smoothers performed worse as they have a poor skill to extrapolate beyond the sampled region. Additionally, accounting for the effect of population size on the spatial distribution of eggs was shown to be fundamental to better model performance.Graphical abstract

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