Unanticipated Global Emergence of Multiple Pneumocystis jirovecii Mutants Selected by Mycophenolic Acid Driving Increasing Outbreaks in Solid Organ Transplant Recipients

  • Abstract
  • References
  • Similar Papers
Abstract
Translate article icon Translate Article Star icon
Take notes icon Take Notes

Background:Classified by the WHO as one of the 19 most dangerous fungal pathogens, Pneumocystis jirovecii has been associated with increasing outbreaks of Pneumocystis pneumonia (PCP) among solid organ transplant (SOT) recipients worldwide. Mycophenolic acid (MPA), an inosine monophosphate dehydrogenase (IMPDH) inhibitor commonly used as an immunosuppressant to prevent organ rejection, is a risk factor for PCP. However, MPA also displays antifungal activity, potentially protecting against PCP, despite not being used to treat it. Therefore the underlying factors driving these outbreaks remain undefined.Methods:In this international multicenter retrospective observational study, P. jirovecii samples were collected from 96 SOT patients (including 94 from nine separate outbreaks and 84 on MPA therapy) and 67 non-transplant controls (none on MPA), between 1986 and 2020 across six countries in Europe, North America and Asia. All samples underwent extensive targeted sequencing of the P. jirovecii inosine monophosphate dehydrogenase (impdh) gene and multiple genetic markers, with selected samples further analyzed for complete mitogenome and restriction fragment length polymorphisms. Computational modeling was employed to predict the effects of IMPDH mutations on protein structure and MPA binding.Results:Six impdh mutations (including one previously reported) were identified, with frequencies of 4–21% each in SOT patients and 0–1% in controls. These mutations were strongly associated with prior MPA exposure and showed marked geographic segregation and temporal shifts. Four mutations were each linked to multiple distinct genotype profiles, representing separate P. jirovecii strains. Structure modeling predicted that these four mutations reduced protein stability and binding affinity to MPA.Conclusions:This study suggests that the widespread use of MPA in SOT recipients has unexpectedly driven the emergence of multiple impdh mutations in P. jirovecii, each presumably arising independently in multiple strains worldwide. These mutations likely confer drug resistance and provide a selective survival advantage to P. jirovecii in SOT recipients exposed to MPA, thereby facilitating transmission and outbreaks. These findings have significant implications for the prevention and clinical management of PCP in SOT recipients, highlighting a rare example of how antimicrobial resistance can emerge through unexpected pathways, transcending conventional antimicrobial use and emphasizing the need for increased vigilance and strategic adaptation in clinical practice.

ReferencesShowing 10 of 28 papers
  • Open Access Icon
  • Cite Count Icon 16
  • 10.1093/cid/ciab474
Genetic and Epidemiologic Analyses of an Outbreak of Pneumocystis jirovecii Pneumonia Among Kidney Transplant Recipients in the United States
  • May 21, 2021
  • Clinical Infectious Diseases
  • Marwan M Azar + 16 more

  • Open Access Icon
  • Cite Count Icon 13
  • 10.1002/pro.3766
A structural determinant of mycophenolic acid resistance in eukaryotic inosine 5'-monophosphate dehydrogenases.
  • Nov 20, 2019
  • Protein Science
  • Rebecca Freedman + 3 more

  • Open Access Icon
  • Cite Count Icon 7
  • 10.3390/jof7100849
Selection of Pneumocystis jirovecii Inosine 5'-Monophosphate Dehydrogenase Mutants in Solid Organ Transplant Recipients: Implication of Mycophenolic Acid.
  • Oct 10, 2021
  • Journal of Fungi
  • Claire V Hoffmann + 8 more

  • Open Access Icon
  • Cite Count Icon 53
  • 10.1016/s2666-5247(24)00042-9
The WHO fungal priority pathogens list: a crucial reappraisal to review the prioritisation
  • Apr 9, 2024
  • The Lancet Microbe
  • Giacomo Casalini + 2 more

  • Open Access Icon
  • Cite Count Icon 77
  • 10.1093/cid/cis217
Outbreaks of Pneumocystis Pneumonia in 2 Renal Transplant Centers Linked to a Single Strain of Pneumocystis: Implications for Transmission and Virulence
  • Mar 19, 2012
  • Clinical Infectious Diseases
  • M Sassi + 14 more

  • Open Access Icon
  • PDF Download Icon
  • Cite Count Icon 41
  • 10.1038/s41467-023-39416-2
Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients
  • Jul 12, 2023
  • Nature Communications
  • Julio Diaz Caballero + 16 more

  • Open Access Icon
  • Cite Count Icon 36
  • 10.1128/aac.41.1.40
IMP dehydrogenase from Pneumocystis carinii as a potential drug target.
  • Jan 1, 1997
  • Antimicrobial Agents and Chemotherapy
  • M J O'Gara + 4 more

  • Open Access Icon
  • PDF Download Icon
  • Cite Count Icon 63
  • 10.1074/jbc.m409847200
The Functional Basis of Mycophenolic Acid Resistance in Candida albicans IMP Dehydrogenase
  • Mar 1, 2005
  • Journal of Biological Chemistry
  • Gerwald A Köhler + 6 more

  • Open Access Icon
  • Cite Count Icon 168
  • 10.3201/eid1903.121151
Increasing Pneumocystis Pneumonia, England, UK, 2000–2010
  • Mar 1, 2013
  • Emerging Infectious Diseases
  • Rishma Maini + 6 more

  • Open Access Icon
  • Cite Count Icon 54
  • 10.1016/j.lanepe.2022.100400
Evolving epidemiology of pneumocystis pneumonia: Findings from a longitudinal population-based study and a retrospective multi-center study in Germany
  • May 15, 2022
  • The Lancet Regional Health - Europe
  • Benedikt Kolbrink + 6 more

Similar Papers
  • Research Article
  • 10.1016/j.lanmic.2025.101146
Association between mycophenolic acid treatment and infection with specific strains of Pneumocystis jirovecii in solid organ transplant recipients in France and Switzerland: a multicentre, retrospective, cross-sectional study.
  • Jul 1, 2025
  • The Lancet. Microbe
  • Claire V Hoffmann + 63 more

Association between mycophenolic acid treatment and infection with specific strains of Pneumocystis jirovecii in solid organ transplant recipients in France and Switzerland: a multicentre, retrospective, cross-sectional study.

  • Research Article
  • Cite Count Icon 68
  • 10.1111/ajt.16431
Inpatient COVID-19 outcomes in solid organ transplant recipients compared to non-solid organ transplant patients: A retrospective cohort.
  • Feb 21, 2021
  • American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons
  • Robin K Avery + 14 more

Inpatient COVID-19 outcomes in solid organ transplant recipients compared to non-solid organ transplant patients: A retrospective cohort.

  • Research Article
  • Cite Count Icon 7
  • 10.3390/jof7100849
Selection of Pneumocystis jirovecii Inosine 5'-Monophosphate Dehydrogenase Mutants in Solid Organ Transplant Recipients: Implication of Mycophenolic Acid.
  • Oct 10, 2021
  • Journal of Fungi
  • Claire V Hoffmann + 8 more

Mycophenolic acid (MPA) targets the inosine 5′-monophosphate dehydrogenase (IMPDH) of human lymphocytes. It is widely used as an immunosuppressant to prevent rejection in solid organ transplant (SOT) recipients who, incidentally, are at risk for Pneumocystis pneumonia (PCP). We hypothesized that MPA exerts selective pressure on P. jirovecii microorganisms considering its in vitro antifungal activity on other fungi. Thus, we analysed impdh gene in P. jirovecii isolates from SOT recipients. P. jirovecii specimens from 26 patients diagnosed with PCP from 2010 to 2020 were retrospectively examined: 10 SOT recipients treated with MPA and 16 non-SOT patients without prior exposure to MPA. The P. jirovecii impdh gene was amplified and sequenced. Nucleotide sequences were aligned with the reference sequences retrieved from available P. jirovecii whole genomes. The deduced IMPDH protein sequences were aligned with available IMPDH proteins from Pneumocystis spp. and other fungal species known to be in vitro sensitive or resistant to MPA. A total of nine SNPs was identified. One SNP (G1020A) that results in an Ala261Thr substitution was identified in all SOT recipients and in none of the non-SOT patients. Considering that IMPDHs of other fungi, resistant to MPA, harbour Thr (or Ser) at the analogous position, the Ala261Thr mutation observed in MPA-treated patients was considered to represent the signature of P. jirovecii exposure to MPA. These results suggest that MPA may be involved in the selection of specific P. jirovecii strains that circulate in the SOT recipient population.

  • Discussion
  • Cite Count Icon 4
  • 10.1016/j.jinf.2023.01.019
Serum IFN-γ and RNAemia temporal profiles as biomarkers of severe COVID-19 in solid organ transplant and immunocompetent patients
  • Jan 21, 2023
  • The Journal of Infection
  • Sonsoles Salto-Alejandre + 32 more

Serum IFN-γ and RNAemia temporal profiles as biomarkers of severe COVID-19 in solid organ transplant and immunocompetent patients

  • Research Article
  • Cite Count Icon 96
  • 10.1111/ajt.16280
Outcomes of critically ill solid organ transplant patients with COVID-19 in the United States.
  • Sep 15, 2020
  • American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons
  • Miklos Z Molnar + 15 more

Outcomes of critically ill solid organ transplant patients with COVID-19 in the United States.

  • Research Article
  • Cite Count Icon 25
  • 10.1046/j.1365-2141.2002.03887.x
Prevention and treatment of epstein–barr virus‐associated lymphoproliferative disorders in recipients of bone marrow and solid organ transplants
  • Nov 18, 2002
  • British Journal of Haematology
  • Ellen Meijer + 4 more

Prevention and treatment of epstein–barr virus‐associated lymphoproliferative disorders in recipients of bone marrow and solid organ transplants

  • Research Article
  • Cite Count Icon 44
  • 10.1111/ajt.12125
Travel Medicine and Transplant Tourism in Solid Organ Transplantation
  • Mar 1, 2013
  • American Journal of Transplantation
  • C.N Kotton + 1 more

Travel Medicine and Transplant Tourism in Solid Organ Transplantation

  • Research Article
  • Cite Count Icon 12
  • 10.1111/ajt.15826
A multicenter study to define the epidemiology and outcomes of Clostridioides difficile infection in pediatric hematopoietic cell and solid organ transplant recipients.
  • Mar 10, 2020
  • American Journal of Transplantation
  • Erick F Mayer + 23 more

A multicenter study to define the epidemiology and outcomes of Clostridioides difficile infection in pediatric hematopoietic cell and solid organ transplant recipients.

  • Research Article
  • Cite Count Icon 63
  • 10.1111/ajt.16079
Clinical outcomes and serologic response in solid organ transplant recipients with COVID-19: A case series from the United States.
  • Jul 17, 2020
  • American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons
  • Monica Fung + 19 more

Clinical outcomes and serologic response in solid organ transplant recipients with COVID-19: A case series from the United States.

  • Discussion
  • 10.1111/ajt.16413
Response to "Is the outcome of SARS-CoV-2 infection in solid organ transplant recipients really similar to that of the general population?"
  • Jan 12, 2021
  • American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons
  • Miklos Z Molnar + 3 more

Response to "Is the outcome of SARS-CoV-2 infection in solid organ transplant recipients really similar to that of the general population?"

  • Research Article
  • Cite Count Icon 41
  • 10.1111/ajt.16541
Prevalence and predictors of SARS-CoV-2 antibodies among solid organ transplant recipients with confirmed infection.
  • May 6, 2021
  • American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons
  • Daniel Burack + 10 more

Prevalence and predictors of SARS-CoV-2 antibodies among solid organ transplant recipients with confirmed infection.

  • Research Article
  • Cite Count Icon 44
  • 10.1111/ajt.16460
An early experience on the effect of solid organ transplant status on hospitalized COVID-19 patients.
  • Jan 13, 2021
  • American Journal of Transplantation
  • Vinay Nair + 34 more

An early experience on the effect of solid organ transplant status on hospitalized COVID-19 patients.

  • Research Article
  • Cite Count Icon 10
  • 10.1111/ajt.16942
Mortality in solid organ transplant recipients with COVID-19: More than meets the eye
  • May 1, 2022
  • American Journal of Transplantation
  • Umberto Maggiore + 3 more

Mortality in solid organ transplant recipients with COVID-19: More than meets the eye

  • Research Article
  • Cite Count Icon 79
  • 10.1111/j.1600-6143.2010.03423.x
Duodenal Villous Atrophy: A Cause of Chronic Diarrhea After Solid-Organ Transplantation
  • Mar 1, 2011
  • American Journal of Transplantation
  • H Weclawiak + 12 more

Duodenal Villous Atrophy: A Cause of Chronic Diarrhea After Solid-Organ Transplantation

  • Discussion
  • Cite Count Icon 19
  • 10.1016/j.bbmt.2006.07.009
Pharmacokinetics of Oral Mycophenolate Mofetil in Dog: Bioavailability Studies and the Impact of Antibiotic Therapy
  • Dec 1, 2006
  • Biology of Blood and Marrow Transplantation
  • Marilena Lupu + 4 more

Pharmacokinetics of Oral Mycophenolate Mofetil in Dog: Bioavailability Studies and the Impact of Antibiotic Therapy

More from: medRxiv
  • Research Article
  • 10.1101/2025.08.15.25333725
Multi-View Echocardiographic Embedding for Accessible AI Development
  • Oct 29, 2025
  • medRxiv
  • Takeshi Tohyama + 7 more

  • Research Article
  • 10.1101/2025.08.11.25332026
Pulse oximeter performance and skin pigment: comparison of 34 oximeters using current and emerging regulatory frameworks
  • Oct 28, 2025
  • medRxiv
  • Caroline Hughes + 23 more

  • Research Article
  • 10.1101/2025.08.25.25334266
TARGET-AI: a foundational approach for the targeted deployment of artificial intelligence electrocardiography in the electronic health record
  • Oct 25, 2025
  • medRxiv
  • Evangelos K Oikonomou + 5 more

  • Open Access Icon
  • Research Article
  • 10.1101/2025.01.27.25321015
Distress is positively associated with induced secondary hyperalgesia in people with suppressed HIV
  • Oct 24, 2025
  • medRxiv
  • Luyanduthando Mqadi + 11 more

  • Research Article
  • 10.1101/2025.09.26.25336712
Gaps in the Type 1 Diabetes Mellitus care cascade: a national perspective using South Africa’s National Health Laboratory Service (NHLS) database
  • Oct 21, 2025
  • medRxiv
  • Alana T Brennan + 11 more

  • Research Article
  • 10.1101/2025.09.03.25334905
INSPECT-SR: a tool for assessing trustworthiness of randomised controlled trials
  • Oct 21, 2025
  • medRxiv
  • Jack Wilkinson + 52 more

  • Research Article
  • 10.1101/2025.04.18.25326080
Incidence, Persistence, and Steady-State Prevalence in Coding Intensity for Health Plan Payment
  • Oct 17, 2025
  • medRxiv
  • Thomas G Mcguire + 5 more

  • Research Article
  • 10.1101/2025.07.21.25331193
Plasma brain-derived tau: analytical and clinical validation of the first commercial immunoassay
  • Oct 7, 2025
  • medRxiv
  • Michel N Nafash + 9 more

  • Research Article
  • 10.1101/2025.06.04.25328941
serocalculator, an R package for estimating seroincidence from cross-sectional serological data
  • Oct 6, 2025
  • medRxiv
  • Kristina W Lai + 11 more

  • Research Article
  • 10.1101/2025.07.21.25331927
Altered oscillatory coupling reflects possible inhibitory interneuron dysfunction in Rett syndrome
  • Oct 6, 2025
  • medRxiv
  • Devorah Kranz + 15 more

Save Icon
Up Arrow
Open/Close
  • Ask R Discovery Star icon
  • Chat PDF Star icon

AI summaries and top papers from 250M+ research sources.

Search IconWhat is the difference between bacteria and viruses?
Open In New Tab Icon
Search IconWhat is the function of the immune system?
Open In New Tab Icon
Search IconCan diabetes be passed down from one generation to the next?
Open In New Tab Icon