Trophic Niche Partitioning among Insectivorous Bats Using a Combination of Stable Isotope Analyses and Wing Morphology

Over the last 100 yr, anthropogenic stressors have decimated the assemblage of deepwater coregonines that once underpinned the food webs of the Laurentian Great Lakes. As a part of ongoing restoration efforts, fisheries managers are interested in reintroducing deepwater coregonines from remnant populations to reestablish historical food web connections. However, little is known about historical trophic position and niche partitioning among deepwater coregonines in the Great Lakes. We used nitrogen stable isotope analysis of amino acids to compare trophic position of museum‐preserved (1920s) and present‐day forage fishes in Lakes Michigan and Superior. In the 1920s, deepwater coregonines exhibited clear trophic niche partitioning, with trophic positions spanning a full trophic level. Additionally, species trophic positions were tightly conserved between lakes. In Lake Superior, trophic niche partitioning has been maintained over the last 100 yr, but trophic position has shifted downward by ~0.5 trophic level. The more dramatic species loss in Lake Michigan corresponds with a sharp reduction in trophic niche breadth over time. Our study reveals remarkable trophic niche breadth among deepwater coregonines prior to the major anthropogenic impacts on the Laurentian Great Lakes and provides a food web benchmark for restoring the historical trophic diversity of this iconic species flock.

AimUnderstanding the mechanisms that allow the coexistence of species is key to preserve full ecosystem functioning. In dynamic environments, the study of ecological niches faces the complexity associated to the three dimensionality of the habitat and requires information that reflects such heterogeneity. Within this context, this study intends to identify the segregation mechanisms behind the co‐occurrence of five phylogenetically related pelagic birds by applying a functional perspective based on seabirds' vertical ranges and prey availability features such as depth and body size.LocationBay of Biscay.MethodsBased on the hypothesis that niche differentiation may occur in any of the three dimensions of the marine environment, we (a) identified the biologically meaningful vertical range affecting seabird species, (b) modelled their environmental and trophic niches, (c) estimated an environmental and trophic overlap index for each pairwise species, and (d) developed a conceptual framework with the most plausible segregation hypotheses.ResultsThe application of the conceptual framework revealed that in this particular area, pelagic birds coexist through environmental and trophic niche partitioning and potentially through vertical segregation, based on the different biologically meaningful vertical ranges we identified for each species. Indeed, some species responded to prey and oceanographic conditions on the surface (10 m), while others responded to the conditions on deeper waters (above the depth of maximum temperature gradient). These different responses could be interpreted as an additional mechanism to reduce competition, although seabirds diving records would be needed to contrast this hypothesis.Main conclusionsNiche differentiation was found to be primarily driven by trophic and environmental niche partitioning, although species were also influenced by conditions on the vertical dimension. Considering all the dimensions of the niche is essential to fully understand how diving seabirds coexist in dynamic systems and provides insights on species' 3D niches that may help advance into their management.

Niche partitioning is a key mechanism for explaining species coexistence, including the coexistence of ants in trees of the Brazilian savanna ( cerrado ). However, we have limited information on the extent to which arboreal ant species exploit different food resources and/or have different daily foraging schedules. We tested these ideas through a baiting experiment, and by measuring the isotopic signature (δ 15 N) and the critical thermal maximum (CT max ) of the 14 most common species found in a typical cerrado tree species. Although most species foraged on all bait types offered, species‐specific preferences were noted for about one‐third of the species. We also found a wide variation in mean δ 15 N between species, reflecting interspecific differences in trophic position. Most (71.4%) species foraged predominantly on a given period of the day, ranging from strictly nocturnal species to those that foraged mainly in the afternoon. Species with a higher heat tolerance (higher CT max ) often foraged at warmer periods of the day than those with a lower tolerance. Despite the evidence of trophic and temporal niche partitioning, other mechanisms, such as nesting site specialization and behavioural trade‐offs, are required to explain species coexistence in this arboreal ant assemblage, as several species pairs largely overlapped both in their diet and time of foraging. Importantly, our results provide additional support for the idea that physiological restriction to high temperatures is important for understanding interspecific differences in foraging activity schedules.

Adaptive radiations are typically characterized by niche partitioning among their constituent species. Trophic niche partitioning is particularly important in predatory animals, which rely on limited food resources for survival. We test for trophic niche partitioning in an adaptive radiation of Hawaiian Tetragnatha spiders, which have diversified in situ on the Hawaiian Islands. We focus on a community of nine species belonging to two different clades, one web‐building and the other actively hunting, which co‐occur in wet forest on East Maui. We hypothesize that trophic niches differ significantly both: (a) among species within a clade, indicating food resource partitioning, and (b) between the two clades, corresponding to their differences in foraging strategy. To assess niches of the spider species, we measure: (a) web architecture, the structure of the hunting tool, and (b) site choice, the physical placement of the web in the habitat. We then test whether differences in these parameters translate into meaningful differences in trophic niche by measuring (c) stable isotope signatures of carbon and nitrogen in the spiders’ tissues, and (d) gut content of spiders based on metabarcoding data. We find significant interspecific differences in web architecture and site choice. Importantly, these differences are reflected in stable isotope signatures among the five web‐building species, as well as significant isotopic differences between web‐builders and active hunters. Gut content data also show interspecific and inter‐clade differences. Pairwise overlaps of web architecture between species are positively correlated with overlaps of isotopic signature. Our results reveal trophic niche partitioning among species within each clade, as well as between the web‐building and actively hunting clades. Based on the correlation between web architecture and stable isotopes, it appears that the isotopic signatures of spiders’ tissues are influenced by architectural differences among their webs. Our findings indicate an important link between web structure, microhabitat preference and diet in the Hawaiian Tetragnatha. A free Plain Language Summary can be found within the Supporting Information of this article.

1. The potential for competition is highest among species in close association. Despite net benefits for both parties, mutualisms can involve costs, including food competition. This might be true for the two neotropical ants Camponotus femoratus and Crematogaster levior, which share the same nest in a presumably mutualistic association (parabiosis).2. While each nest involves one Crematogaster and one Camponotus partner, both taxa were recently found to comprise two cryptic species that show no partner preferences and seem ecologically similar. Since these cryptic species often occur in close sympatry, they might need to partition their niches to avoid competitive exclusion.3. Here, we investigated first, is there interference competition between parabiotic Camponotus and Crematogaster, and do they prefer different food sources under competition? And second, is there trophic niche partitioning between the cryptic species of either genus?4. Using cafeteria experiments, neutral lipid fatty acid and stable isotope analyses, we found evidence for interference competition, but also trophic niche partitioning between Camponotus and Crematogaster. Both preferred protein‐ and carbohydrate‐rich baits, but at protein‐rich baits Ca. femoratus displaced Cr. levior over time, suggesting a potential discovery‐dominance trade‐off between parabiotic partners. Only limited evidence was found for trophic differentiation between the cryptic species of each genus.5. Although we cannot exclude differentiation in other niche dimensions, we argue that neutral dynamics might mediate the coexistence of cryptic species. This model system is highly suitable for further studies of the maintenance of species diversity and the role of mutualisms in promoting species coexistence.

Rhinopoma hardwickii is currently classified as a member of the Yinpterochiroptera suborder, which includes frugivorous and some insectivorous bats. This species is the smallest in the Rhinopomatidae family and easily identified by its long tail. The wing morphology and echolocation calls of this species were studies to see if there were any changes in wing morphology between sexes, echolocation calls across different environments such as natural (roost and field) and controlled (captive), as well as different geographical areas. In this study, a total of 41 individuals (27 male and 14 female) of R. hardwickii were captured and their wing morphology was measured. The results show that there were no statistically significant variations in their morphometric characteristics or in wing morphology between the sexes. This species has with high wing loading and a high aspect ratio, as well as pointed wing tips. The echolocation calls consisted up to five harmonics of FM and CF- FM sweeps. Peak frequencies, start frequency, end frequency, and IPI of three separate environment parameters (roost, capitative, and field recording) differed significantly (p > 0.001).Moreover, we compared the frequency at maximum energy with four different geographical regions such as Kerala, Gujrat, and Israel to current study, and found that the frequencies of bat calls do not vary with geographical region (H=0.667, df=3, p=0.881). Therefore, the current study provides accurate identification of R. hardwickii on the basis of echolocation call in a different environment. The echolocation call and wing morphology data clearly show that this species is a fast flyer with limited manoeuvrability that feeds on forest canopy or over water bodies.

Annual killifish of the genus Nothobranchius often co-occur in temporary savannah pools. Their space- and time-limited environment does not allow for any substantial habitat or temporal segregation. Coexisting species are therefore predicted to have well separated trophic niches to avoid intense food competition. Although in a previous “snapshot” study using stomach content analysis (SCA), the trophic niches of three sympatric species (N. furzeri, N. orthonotus, and N. pienaari) were found to vary among species, the difference was relatively weak and inconsistent across different sites. Here, we used the time-integrative capacity of stable isotope analysis to test whether the trophic niches of sympatric Mozambican Nothobranchius are more distinct over a long-term period. Analysis of carbon and nitrogen stable isotopes separated the trophic niche and trophic position of N. pienaari but failed to find any difference between N. furzeri/N. kadleci and N. orthonotus. No segregation was found at the sites with low prey diversity. In contrast, SCA identified N. orthonotus as the species with the most distinct trophic niche. We discuss the effect of prey diversity and different sensitivities of stomach content and stable isotope analysis in general and conclude that the trophic niches of the three sympatric Nothobranchius species are well separated.

Animal foraging and competition are defined by the partitioning of three primary niche axes: space, time, and resources. Human disturbance is rapidly altering the spatial and temporal niches of animals, but the impact of humans on resource consumption and partitioning-arguably the most important niche axis-is poorly understood. We assessed resource consumption and trophic niche partitioning as a function of human disturbance at the individual, population, and community levels using stable isotope analysis of 684 carnivores from seven communities in North America. We detected significant responses to human disturbance at all three levels of biological organization: individual carnivores consumed more human food subsidies in disturbed landscapes, leading to significant increases in trophic niche width and trophic niche overlap among species ranging from mesocarnivores to apex predators. Trophic niche partitioning is the primary mechanism regulating coexistence in many communities, and our results indicate that humans fundamentally alter resource niches and competitive interactions among terrestrial consumers. Among carnivores, niche overlap can trigger interspecific competition and intraguild predation, while the consumption of human foods significantly increases human-carnivore conflict. Our results suggest that human disturbances, especially in the form of food subsidies, may threaten carnivores by increasing the probability of both interspecific competition and human-carnivore conflict. Ultimately, these findings illustrate a potential decoupling of predator-prey dynamics, with impacts likely cascading to populations, communities, and ecosystems.

Trophic niche theory predicts that species in competition for a limiting resource will evolve adaptations allowing them to consume alternative resources and occupy new niche space. Trophic niche partitioning is often identified by differences in the morphology of feeding structures across species; however, these differences may not always be readily observable. Due to their constrained polyp morphology, octocorals are often viewed a single functional group that contributes to benthic-pelagic coupling by feeding opportunistically on available particles. To test the hypothesis that sympatric gorgonians share the same trophic niche, feeding selectivity of three gorgonian species (Leptogorgia virgulata, Muricea pendula, and Thesea nivea) was compared using a combination of flume experiments and stable isotope analysis. The tentacle length and polyp surface area of L. virgulata and T. nivea were also measured and compared. In flume experiments, clearance of rotifers (“typical” zooplankton) and a mixture of cultured phytoplankton indicated that L. virgulata and T. nivea fed on zooplankton and not phytoplankton. Stable isotope values for all three species are consistent with distinct trophic niches, with M. pendula occupying a lower trophic level. Thesea nivea was found to have significantly larger polyp surface area and tentacle length; however, this did not appear to explain observed trophic differences. The results of this study provide evidence for niche partitioning, but future work is required to better understand the mechanism behind this divergence.

Documenting trophic niche partitioning and resource use within a community is critical to evaluate underlying mechanisms of coexistence, competition, or predation. Detailed knowledge about foraging is essential as it may influence the vital rates, which, in turn, can affect trophic relationships between species, and population dynamics. The aims of this study were to evaluate resource and trophic niche partitioning in summer/autumn between the endangered Atlantic‐Gaspésie caribou (Rangifer tarandus caribou) population, moose (Alces americanus) and their incidental predators, the black bear (Ursus americanus) and coyote (Canis latrans), and to quantify the extent to which these predators consumed caribou. Bayesian isotopic analysis showed a small overlap in trophic niche for the two sympatric ungulates suggesting a low potential for resource competition. Our results also revealed that caribou occupied a larger isotopic niche area than moose, suggesting a greater diversity of resources used by caribou. Not surprisingly, coyotes consumed mainly deer (Odocoileus virginianus), moose, snowshoe hare (Lepus americanus), and occasionally caribou, while bears consumed mainly vegetation and, to a lesser extent, moose and caribou. As coyotes and bears also feed on plant species, we documented trophic niche overlap between caribou and their predators, as searching for similar resources can force them to use the same habitats and thus increase the encounter rate and, ultimately, mortality risk for caribou. Although the decline in the Gaspésie caribou population is mostly driven by habitat‐mediated predation, we found evidence that the low level of resource competition with moose, added to the shared resources with incidental predators, mainly bears, may contribute to jeopardize the recovery of this endangered caribou population. Highlighting the trophic interaction between species is needed to establish efficient conservation and management strategies to insure the persistence of endangered populations. The comparison of trophic niches of species sharing the same habitat or resources is fundamental to evaluate the mechanisms of coexistence or competition and eventually predict the consequences of ecosystem changes in the community.

Several recent papers evaluate the relationship between ecological characteristics and extinction risk in bats. These studies report that extinction risk is negatively related to geographic range size and positively related to habitat specialization. Here, we evaluate the hypothesis that extinction risk is also related to dietary specialization in insectivorous vespertilionid bats using both traditional and phylogenetically-controlled analysis of variance. We collected dietary data and The World Conservation Union (IUCN) rankings for 44 Australian, European, and North American bat species. Our results indicate that species of conservation concern (IUCN ranking near threatened or above) are more likely to have a specialized diet than are species of least concern. Additional analyses show that dietary breadth is not correlated to geographic range size or wing morphology, characteristics previously found to correlate with extinction risk. Therefore, there is likely a direct relationship between dietary specialization and extinction risk; however, the large variation in dietary breadth within species of least concern suggests that diet alone cannot explain extinction risk. Our results may have important implications for the development of predictive models of extinction risk and for the assignment of extinction risk to insectivorous bat species. Similar analyses should be conducted on additional bat families to assess the generality of this relationship between niche breadth and extinction risk.

Stable isotope analysis (SIA) is a powerful tool for assessing resource use and trophic structure, enhancing understanding of coexistence mechanisms among sympatric species. In this study, we analyzed carbon (δ¹³C) and nitrogen (δ¹⁵N) stable isotopes in bone collagen of three coexisting anuran species-Bombina orientalis, Rana uenoi, and R. huanrenensis-from South Korean forest to evaluate their isotopic niches, resource partitioning, and within-population variation. Rana uenoi and R. huanrenensis utilized a broad range of resources with high overlap, suggesting they likely share dietary habits and occupy similar trophic roles. In contrast, relative δ¹⁵N enrichment of B. orientalis indicates a distinct trophic niche, although its resource utilization was not entirely segregated from that of the two Rana species. Furthermore, large groups of both Rana species tended to exploit a wider variety of resources than smaller ones, whereas B. orientalis showed no isotopic sex differences. All three species displayed ontogenetic niche shifts, with B. orientalis increasingly relying on aquatic-origin resources, while the two Rana species shifting toward terrestrial-origin resources. These findings provide insight into the trophic dynamics of forest-dwelling anurans and may serve as a baseline for ecological and conservation research in the future.

Fin and humpback whales are large consumers that are often sympatric, effectively sharing or partitioning their use of habitat and prey resources. Stable carbon and nitrogen isotopes in the skin of fin and humpback whales from two regions in the western Gulf of Alaska, Kodiak, and Shumagin Islands, were analyzed to test the hypothesis that these sympatric baleen whales exhibit trophic niche partitioning within these regions. Standard ellipse areas, estimated using Bayesian inference, suggested that niche partitioning between species is occurring in the Kodiak region but not in the Shumagin Islands. Isotopic mixing models based on stable isotopes from whales and local prey samples, were used to estimate possible diet solutions for whales in the Kodiak region. Comparison of isotopic niches and diet models support niche partitioning, with fin whales foraging primarily on zooplankton and humpback whales foraging on zooplankton and small forage fish. The results of this study show that niche partitioning between sympatric species can vary by region and may be the result of prey availability, prey preferences, or both.

Anthropogenic activities have significantly altered freshwater fish communities. Extirpations of deepwater coregonines (Coregonus spp.), a diverse group of fish species, have left vast areas of the Laurentian Great Lakes devoid of a deepwater fish community. Currently, fisheries managers are considering restoring populations by reintroducing deepwater coregonines from Lake Superior and Lake Nipigon. However, little is known about the historical ecology of deepwater coregonines, and species characterization has proved difficult. We used stable isotope analysis of museum-preserved and contemporary specimens to investigate if (1) coregonine species historically occupied distinct niches and (2) the pattern of trophic niche partitioning has changed over the last century. Across all lakes, individual species occupied distinct trophic niches, confirming that these species were ecologically distinct. Understanding trophic niche partitioning helps resolve uncertainty about distinctness of species within and across lakes and may provide a better ecological basis for rehabilitation of Great Lakes food webs and ecosystems.

Understanding the mechanism by which non-native fish species integrate into native communities is crucial for evaluating the possibility of their establishment success. The genus Pangasianodon, comprising Pangasianodon gigas and Pangasianodon hypophthalmus, has been introduced into reservoirs, which are non-native habitats, for fishery stock enhancement. P. gigas and P. hypophthalmus often successfully establish and co-occur in several Thai reservoirs, but there is little information on differences in food resource use between the two species. To investigate the trophic niche width of P. gigas and P. hypophthalmus in a Thai reservoir, we conducted stable carbon and nitrogen ratio (δ13C and δ15N) analyses. We examined the degree of individual specialization in both species using the δ13C and δ15N values of muscle and liver tissues, which provides long- and short-term diet information. The isotopic niches did not overlap between P. gigas and P. hypophthalmus. The δ15N value of P. gigas was significantly higher than that of P. hypophthalmus, whereas the δ13C value did not significantly differ between the two species. The isotopic niche sizes were larger in P. hypophthalmus than in P. gigas. Individual specialization was observed in P. hypophthalmus but not in P. gigas, indicating that intraspecific variation in food resource use was larger in P. hypophthalmus compared to P. gigas. These findings suggest that trophic niche partitioning was one of the factors facilitating the establishment success of P. gigas and P. hypophthalmus in a reservoir, but the establishment process may differ between the two species.