Transformer Models, Graph Networks, and Generative AI in Gut Microbiome Research: A Narrative Review.

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The rapid advancement in artificial intelligence (AI) has fundamentally reshaped gut microbiome research by enabling high-resolution analysis of complex, high-dimensional microbial communities and their functional interactions with the human host. This narrative review aims to synthesize recent methodological advances in AI-driven gut microbiome research and to evaluate their translational relevance for therapeutic optimization, personalized nutrition, and precision medicine. A narrative literature review was conducted using PubMed, Google Scholar, Web of Science, and IEEE Xplore, focusing on peer-reviewed studies published between approximately 2015 and early 2025. Representative articles were selected based on relevance to AI methodologies applied to gut microbiome analysis, including machine learning, deep learning, transformer-based models, graph neural networks, generative AI, and multi-omics integration frameworks. Additional seminal studies were identified through manual screening of reference lists. The reviewed literature demonstrates that AI enables robust identification of diagnostic microbial signatures, prediction of individual responses to microbiome-targeted therapies, and design of personalized nutritional and pharmacological interventions using in silico simulations and digital twin models. AI-driven multi-omics integration-encompassing metagenomics, metatranscriptomics, metabolomics, proteomics, and clinical data-has improved functional interpretation of host-microbiome interactions and enhanced predictive performance across diverse disease contexts. For example, AI-guided personalized nutrition models have achieved AUC exceeding 0.8 for predicting postprandial glycemic responses, while community-scale metabolic modeling frameworks have accurately forecast individualized short-chain fatty acid production. Despite substantial progress, key challenges remain, including data heterogeneity, limited model interpretability, population bias, and barriers to clinical deployment. Future research should prioritize standardized data pipelines, explainable and privacy-preserving AI frameworks, and broader population representation. Collectively, these advances position AI as a cornerstone technology for translating gut microbiome data into actionable insights for diagnostics, therapeutics, and precision nutrition.

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  • Research Article
  • Cite Count Icon 56
  • 10.5204/mcj.3004
ChatGPT Isn't Magic
  • Oct 2, 2023
  • M/C Journal
  • Tama Leaver + 1 more

Introduction Author Arthur C. Clarke famously argued that in science fiction literature “any sufficiently advanced technology is indistinguishable from magic” (Clarke). On 30 November 2022, technology company OpenAI publicly released their Large Language Model (LLM)-based chatbot ChatGPT (Chat Generative Pre-Trained Transformer), and instantly it was hailed as world-changing. Initial media stories about ChatGPT highlighted the speed with which it generated new material as evidence that this tool might be both genuinely creative and actually intelligent, in both exciting and disturbing ways. Indeed, ChatGPT is part of a larger pool of Generative Artificial Intelligence (AI) tools that can very quickly generate seemingly novel outputs in a variety of media formats based on text prompts written by users. Yet, claims that AI has become sentient, or has even reached a recognisable level of general intelligence, remain in the realm of science fiction, for now at least (Leaver). That has not stopped technology companies, scientists, and others from suggesting that super-smart AI is just around the corner. Exemplifying this, the same people creating generative AI are also vocal signatories of public letters that ostensibly call for a temporary halt in AI development, but these letters are simultaneously feeding the myth that these tools are so powerful that they are the early form of imminent super-intelligent machines. For many people, the combination of AI technologies and media hype means generative AIs are basically magical insomuch as their workings seem impenetrable, and their existence could ostensibly change the world. This article explores how the hype around ChatGPT and generative AI was deployed across the first six months of 2023, and how these technologies were positioned as either utopian or dystopian, always seemingly magical, but never banal. We look at some initial responses to generative AI, ranging from schools in Australia to picket lines in Hollywood. We offer a critique of the utopian/dystopian binary positioning of generative AI, aligning with critics who rightly argue that focussing on these extremes displaces the more grounded and immediate challenges generative AI bring that need urgent answers. Finally, we loop back to the role of schools and educators in repositioning generative AI as something to be tested, examined, scrutinised, and played with both to ground understandings of generative AI, while also preparing today’s students for a future where these tools will be part of their work and cultural landscapes. Hype, Schools, and Hollywood In December 2022, one month after OpenAI launched ChatGPT, Elon Musk tweeted: “ChatGPT is scary good. We are not far from dangerously strong AI”. Musk’s post was retweeted 9400 times, liked 73 thousand times, and presumably seen by most of his 150 million Twitter followers. This type of engagement typified the early hype and language that surrounded the launch of ChatGPT, with reports that “crypto” had been replaced by generative AI as the “hot tech topic” and hopes that it would be “‘transformative’ for business” (Browne). By March 2023, global economic analysts at Goldman Sachs had released a report on the potentially transformative effects of generative AI, saying that it marked the “brink of a rapid acceleration in task automation that will drive labor cost savings and raise productivity” (Hatzius et al.). Further, they concluded that “its ability to generate content that is indistinguishable from human-created output and to break down communication barriers between humans and machines reflects a major advancement with potentially large macroeconomic effects” (Hatzius et al.). Speculation about the potentially transformative power and reach of generative AI technology was reinforced by warnings that it could also lead to “significant disruption” of the labour market, and the potential automation of up to 300 million jobs, with associated job losses for humans (Hatzius et al.). In addition, there was widespread buzz that ChatGPT’s “rationalization process may evidence human-like cognition” (Browne), claims that were supported by the emergent language of ChatGPT. The technology was explained as being “trained” on a “corpus” of datasets, using a “neural network” capable of producing “natural language“” (Dsouza), positioning the technology as human-like, and more than ‘artificial’ intelligence. Incorrect responses or errors produced by the tech were termed “hallucinations”, akin to magical thinking, which OpenAI founder Sam Altman insisted wasn’t a word that he associated with sentience (Intelligencer staff). Indeed, Altman asserts that he rejects moves to “anthropomorphize” (Intelligencer staff) the technology; however, arguably the language, hype, and Altman’s well-publicised misgivings about ChatGPT have had the combined effect of shaping our understanding of this generative AI as alive, vast, fast-moving, and potentially lethal to humanity. Unsurprisingly, the hype around the transformative effects of ChatGPT and its ability to generate ‘human-like’ answers and sophisticated essay-style responses was matched by a concomitant panic throughout educational institutions. The beginning of the 2023 Australian school year was marked by schools and state education ministers meeting to discuss the emerging problem of ChatGPT in the education system (Hiatt). Every state in Australia, bar South Australia, banned the use of the technology in public schools, with a “national expert task force” formed to “guide” schools on how to navigate ChatGPT in the classroom (Hiatt). Globally, schools banned the technology amid fears that students could use it to generate convincing essay responses whose plagiarism would be undetectable with current software (Clarence-Smith). Some schools banned the technology citing concerns that it would have a “negative impact on student learning”, while others cited its “lack of reliable safeguards preventing these tools exposing students to potentially explicit and harmful content” (Cassidy). ChatGPT investor Musk famously tweeted, “It’s a new world. Goodbye homework!”, further fuelling the growing alarm about the freely available technology that could “churn out convincing essays which can't be detected by their existing anti-plagiarism software” (Clarence-Smith). Universities were reported to be moving towards more “in-person supervision and increased paper assessments” (SBS), rather than essay-style assessments, in a bid to out-manoeuvre ChatGPT’s plagiarism potential. Seven months on, concerns about the technology seem to have been dialled back, with educators more curious about the ways the technology can be integrated into the classroom to good effect (Liu et al.); however, the full implications and impacts of the generative AI are still emerging. In May 2023, the Writer’s Guild of America (WGA), the union representing screenwriters across the US creative industries, went on strike, and one of their core issues were “regulations on the use of artificial intelligence in writing” (Porter). Early in the negotiations, Chris Keyser, co-chair of the WGA’s negotiating committee, lamented that “no one knows exactly what AI’s going to be, but the fact that the companies won’t talk about it is the best indication we’ve had that we have a reason to fear it” (Grobar). At the same time, the Screen Actors’ Guild (SAG) warned that members were being asked to agree to contracts that stipulated that an actor’s voice could be re-used in future scenarios without that actor’s additional consent, potentially reducing actors to a dataset to be animated by generative AI technologies (Scheiber and Koblin). In a statement issued by SAG, they made their position clear that the creation or (re)animation of any digital likeness of any part of an actor must be recognised as labour and properly paid, also warning that any attempt to legislate around these rights should be strongly resisted (Screen Actors Guild). Unlike the more sensationalised hype, the WGA and SAG responses to generative AI are grounded in labour relations. These unions quite rightly fear the immediate future where human labour could be augmented, reclassified, and exploited by, and in the name of, algorithmic systems. Screenwriters, for example, might be hired at much lower pay rates to edit scripts first generated by ChatGPT, even if those editors would really be doing most of the creative work to turn something clichéd and predictable into something more appealing. Rather than a dystopian world where machines do all the work, the WGA and SAG protests railed against a world where workers would be paid less because executives could pretend generative AI was doing most of the work (Bender). The Open Letter and Promotion of AI Panic In an open letter that received enormous press and media uptake, many of the leading figures in AI called for a pause in AI development since “advanced AI could represent a profound change in the history of life on Earth”; they warned early 2023 had already seen “an out-of-control race to develop and deploy ever more powerful digital minds that no one – not even their creators – can understand, predict, or reliably control” (Future of Life Institute). Further, the open letter signatories called on “all AI labs to immediately pause for at least 6 months the training of AI systems more powerful than GPT-4”, arguing that “labs and independent experts should use this pause to jointly develop and implement a set of shared safety protocols for advanced AI design and development that are rigorously audited and overseen by independent outside experts” (Future of Life Institute). Notably, many of the signatories work for the very companies involved in the “out-of-control race”. Indeed, while this letter could be read as a moment of ethical clarity for the AI industry, a more cynical reading might just be that in warning that their AIs could effectively destroy the w

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  • Cite Count Icon 5
  • 10.1108/tg-08-2025-0240
Generative AI and the urban AI policy challenges ahead: Trustworthy for whom?
  • Dec 4, 2025
  • Transforming Government: People, Process and Policy
  • Igor Calzada

Purpose This study aims to critically examine the socio-technical, economic and governance challenges emerging at the intersection of Generative artificial intelligence (AI) and Urban AI. By foregrounding the metaphor of “the moon and the ghetto” (Nelson, 1977, 2011), the issue invites contributions that interrogate the gap between technological capability and institutional justice. The purpose is to foster a multidisciplinary dialogue–spanning applied economics, public policy, AI ethics and urban governance – that can inform trustworthy, inclusive and democratically grounded AI practices. Contributors are encouraged to explore not just what GenAI can do, but for whom, how and with what consequences. Design/methodology/approach This study draws upon interdisciplinary literature from public policy, innovation studies, digital governance and urban sociology to frame the emerging governance challenges of Generative AI and Urban AI. It builds a conceptual foundation by synthesizing insights from comparative city case studies, innovation systems theory and normative policy frameworks. The approach is interpretive and exploratory, aiming to situate AI technologies within broader institutional, geopolitical and socio-economic contexts. The study invites contributions that adopt empirical, theoretical or practice-based methodologies addressing the governance of GenAI in cities and regions. Findings This study identifies a critical gap between the rapid technological advancements in Generative AI and the institutional readiness of public governance systems – particularly in urban contexts. It finds that current policy frameworks often prioritize efficiency and innovationism over democratic legitimacy, civic trust and inclusive design. Drawing on comparative global city experiences, it highlights the risk of reinforcing power asymmetries without robust accountability mechanisms. The analysis suggests that trustworthy AI is not a purely technical attribute but a political and institutional achievement, requiring participatory governance architectures and innovation systems grounded in public value and civic engagement. Research limitations/implications As an editorial introduction, this study does not present original empirical data but synthesizes key theoretical frameworks, case studies and policy debates to guide future research. Its analytical scope is conceptual and comparative, offering a foundation for submissions that further investigate Generative and Urban AI through empirical, normative and practice-based lenses. The limitations lie in its broad coverage and reliance on secondary sources. Nonetheless, it provides an agenda-setting contribution by highlighting the urgent need for interdisciplinary research into how AI reshapes public governance, institutional legitimacy and urban democratic futures. Practical implications This editorial offers a structured framework for policymakers, urban planners, technologists and public administrators to critically assess the governance of Generative and Urban AI systems. By highlighting international case studies and conceptual tools – such as public algorithmic infrastructures, civic trust frameworks and anticipatory governance – the article underscores the importance of institutional design, regulatory foresight and civic engagement. It invites practitioners to shift from techno-solutionist approaches toward inclusive, democratic and place-based AI governance. The reflections aim to support the development of trustworthy AI policies that are grounded in legitimacy, accountability and societal needs, particularly in urban and regional contexts. Social implications The editorial underscores that Generative and Urban AI systems are not socially neutral but carry significant implications for equity, representation and democratic legitimacy. These technologies risk reinforcing existing social hierarchies and systemic biases if not governed inclusively. This study calls for reimagining trust not as a technical feature but as a relational, contested dynamic between institutions and citizens. It encourages submissions that examine how AI reshapes the urban social contract, affects marginalized communities and challenges existing civic infrastructures. The goal is to promote AI governance frameworks that are pluralistic, just and reflective of diverse societal values and lived experiences. Originality/value This editorial offers a timely and conceptually grounded intervention into the emerging field of Urban AI and Generative AI governance. By framing the challenges through Richard R. Nelson’s metaphor of The Moon and the Ghetto, this study foregrounds the gap between technical capabilities and enduring societal injustices. The contribution lies in its interdisciplinary synthesis – bridging innovation systems, AI ethics, public policy and urban governance. It introduces a critical framework for assessing “trustworthy AI” not as a technical goal but as a democratic achievement and encourages research that is policy-relevant, equity-oriented and attuned to the institutional realities of AI in cities.

  • Research Article
  • Cite Count Icon 11
  • 10.1287/ijds.2023.0007
How Can IJDS Authors, Reviewers, and Editors Use (and Misuse) Generative AI?
  • Apr 1, 2023
  • INFORMS Journal on Data Science
  • Galit Shmueli + 7 more

How Can <i>IJDS</i> Authors, Reviewers, and Editors Use (and Misuse) Generative AI?

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  • Cite Count Icon 26
  • 10.1162/daed_e_01897
Getting AI Right: Introductory Notes on AI &amp; Society
  • May 1, 2022
  • Daedalus
  • James Manyika

This dialogue is from an early scene in the 2014 film Ex Machina, in which Nathan has invited Caleb to determine whether Nathan has succeeded in creating artificial intelligence.1 The achievement of powerful artificial general intelligence has long held a grip on our imagination not only for its exciting as well as worrisome possibilities, but also for its suggestion of a new, uncharted era for humanity. In opening his 2021 BBC Reith Lectures, titled "Living with Artificial Intelligence," Stuart Russell states that "the eventual emergence of general-purpose artificial intelligence [will be] the biggest event in human history."2Over the last decade, a rapid succession of impressive results has brought wider public attention to the possibilities of powerful artificial intelligence. In machine vision, researchers demonstrated systems that could recognize objects as well as, if not better than, humans in some situations. Then came the games. Complex games of strategy have long been associated with superior intelligence, and so when AI systems beat the best human players at chess, Atari games, Go, shogi, StarCraft, and Dota, the world took notice. It was not just that Als beat humans (although that was astounding when it first happened), but the escalating progression of how they did it: initially by learning from expert human play, then from self-play, then by teaching themselves the principles of the games from the ground up, eventually yielding single systems that could learn, play, and win at several structurally different games, hinting at the possibility of generally intelligent systems.3Speech recognition and natural language processing have also seen rapid and headline-grabbing advances. Most impressive has been the emergence recently of large language models capable of generating human-like outputs. Progress in language is of particular significance given the role language has always played in human notions of intelligence, reasoning, and understanding. While the advances mentioned thus far may seem abstract, those in driverless cars and robots have been more tangible given their embodied and often biomorphic forms. Demonstrations of such embodied systems exhibiting increasingly complex and autonomous behaviors in our physical world have captured public attention.Also in the headlines have been results in various branches of science in which AI and its related techniques have been used as tools to advance research from materials and environmental sciences to high energy physics and astronomy.4 A few highlights, such as the spectacular results on the fifty-year-old protein-folding problem by AlphaFold, suggest the possibility that AI could soon help tackle science's hardest problems, such as in health and the life sciences.5While the headlines tend to feature results and demonstrations of a future to come, AI and its associated technologies are already here and pervade our daily lives more than many realize. Examples include recommendation systems, search, language translators - now covering more than one hundred languages - facial recognition, speech to text (and back), digital assistants, chatbots for customer service, fraud detection, decision support systems, energy management systems, and tools for scientific research, to name a few. In all these examples and others, AI-related techniques have become components of other software and hardware systems as methods for learning from and incorporating messy real-world inputs into inferences, predictions, and, in some cases, actions. As director of the Future of Humanity Institute at the University of Oxford, Nick Bostrom noted back in 2006, "A lot of cutting-edge AI has filtered into general applications, often without being called AI because once something becomes useful enough and common enough it's not labeled AI anymore."6As the scope, use, and usefulness of these systems have grown for individual users, researchers in various fields, companies and other types of organizations, and governments, so too have concerns when the systems have not worked well (such as bias in facial recognition systems), or have been misused (as in deepfakes), or have resulted in harms to some (in predicting crime, for example), or have been associated with accidents (such as fatalities from self-driving cars).7Dædalus last devoted a volume to the topic of artificial intelligence in 1988, with contributions from several of the founders of the field, among others. Much of that issue was concerned with questions of whether research in AI was making progress, of whether AI was at a turning point, and of its foundations, mathematical, technical, and philosophical-with much disagreement. However, in that volume there was also a recognition, or perhaps a rediscovery, of an alternative path toward AI - the connectionist learning approach and the notion of neural nets-and a burgeoning optimism for this approach's potential. Since the 1960s, the learning approach had been relegated to the fringes in favor of the symbolic formalism for representing the world, our knowledge of it, and how machines can reason about it. Yet no essay captured some of the mood at the time better than Hilary Putnam's "Much Ado About Not Very Much." Putnam questioned the Dædalus issue itself: "Why a whole issue of Dædalus? Why don't we wait until AI achieves something and then have an issue?" He concluded:This volume of Dædalus is indeed the first since 1988 to be devoted to artificial intelligence. This volume does not rehash the same debates; much else has happened since, mostly as a result of the success of the machine learning approach that was being rediscovered and reimagined, as discussed in the 1988 volume. This issue aims to capture where we are in AI's development and how its growing uses impact society. The themes and concerns herein are colored by my own involvement with AI. Besides the television, films, and books that I grew up with, my interest in AI began in earnest in 1989 when, as an undergraduate at the University of Zimbabwe, I undertook a research project to model and train a neural network.9 I went on to do research on AI and robotics at Oxford. Over the years, I have been involved with researchers in academia and labs developing AI systems, studying AI's impact on the economy, tracking AI's progress, and working with others in business, policy, and labor grappling with its opportunities and challenges for society.10The authors of the twenty-five essays in this volume range from AI scientists and technologists at the frontier of many of AI's developments to social scientists at the forefront of analyzing AI's impacts on society. The volume is organized into ten sections. Half of the sections are focused on AI's development, the other half on its intersections with various aspects of society. In addition to the diversity in their topics, expertise, and vantage points, the authors bring a range of views on the possibilities, benefits, and concerns for society. I am grateful to the authors for accepting my invitation to write these essays.Before proceeding further, it may be useful to say what we mean by artificial intelligence. The headlines and increasing pervasiveness of AI and its associated technologies have led to some conflation and confusion about what exactly counts as AI. This has not been helped by the current trend-among researchers in science and the humanities, startups, established companies, and even governments-to associate anything involving not only machine learning, but data science, algorithms, robots, and automation of all sorts with AI. This could simply reflect the hype now associated with AI, but it could also be an acknowledgment of the success of the current wave of AI and its related techniques and their wide-ranging use and usefulness. I think both are true; but it has not always been like this. In the period now referred to as the AI winter, during which progress in AI did not live up to expectations, there was a reticence to associate most of what we now call AI with AI.Two types of definitions are typically given for AI. The first are those that suggest that it is the ability to artificially do what intelligent beings, usually human, can do. For example, artificial intelligence is:The human abilities invoked in such definitions include visual perception, speech recognition, the capacity to reason, solve problems, discover meaning, generalize, and learn from experience. Definitions of this type are considered by some to be limiting in their human-centricity as to what counts as intelligence and in the benchmarks for success they set for the development of AI (more on this later). The second type of definitions try to be free of human-centricity and define an intelligent agent or system, whatever its origin, makeup, or method, as:This type of definition also suggests the pursuit of goals, which could be given to the system, self-generated, or learned.13 That both types of definitions are employed throughout this volume yields insights of its own.These definitional distinctions notwithstanding, the term AI, much to the chagrin of some in the field, has come to be what cognitive and computer scientist Marvin Minsky called a "suitcase word."14 It is packed variously, depending on who you ask, with approaches for achieving intelligence, including those based on logic, probability, information and control theory, neural networks, and various other learning, inference, and planning methods, as well as their instantiations in software, hardware, and, in the case of embodied intelligence, systems that can perceive, move, and manipulate objects.Three questions cut through the discussions in this volume: 1) Where are we in AI's development? 2) What opportunities and challenges does AI pose for society? 3) How much about AI is really about us?Notions of intelligent machines date all the way back to antiquity.15 Philosophers, too, among them Hobbes, Leibnitz, and Descartes, have been dreaming about AI for a long time; Daniel Dennett suggests that Descartes may have even anticipated the Turing Test.16 The idea of computation-based machine intelligence traces to Alan Turing's invention of the universal Turing machine in the 1930s, and to the ideas of several of his contemporaries in the mid-twentieth century. But the birth of artificial intelligence as we know it and the use of the term is generally attributed to the now famed Dartmouth summer workshop of 1956. The workshop was the result of a proposal for a two-month summer project by John McCarthy, Marvin Minsky, Nathaniel Rochester, and Claude Shannon whereby "An attempt will be made to find how to make machines use language, form abstractions and concepts, solve kinds of problems now reserved for humans, and improve themselves."17In their respective contributions to this volume, "From So Simple a Beginning: Species of Artificial Intelligence" and "If We Succeed," and in different but complementary ways, Nigel Shadbolt and Stuart Russell chart the key ideas and developments in AI, its periods of excitement as well as the aforementioned AI winters. The current AI spring has been underway since the 1990s, with headline-grabbing breakthroughs appearing in rapid succession over the last ten years or so: a period that Jeffrey Dean describes in the title of his essay as a "golden decade," not only for the pace of AI development but also its use in a wide range of sectors of society, as well as areas of scientific research.18 This period is best characterized by the approach to achieve artificial intelligence through learning from experience, and by the success of neural networks, deep learning, and reinforcement learning, together with methods from probability theory, as ways for machines to learn.19A brief history may be useful here: In the 1950s, there were two dominant visions of how to achieve machine intelligence. One vision was to use computers to create a logic and symbolic representation of the world and our knowledge of it and, from there, create systems that could reason about the world, thus exhibiting intelligence akin to the mind. This vision was most espoused by Allen Newell and Hebert Simon, along with Marvin Minsky and others. Closely associated with it was the "heuristic search" approach that supposed intelligence was essentially a problem of exploring a space of possibilities for answers. The second vision was inspired by the brain, rather than the mind, and sought to achieve intelligence by learning. In what became known as the connectionist approach, units called perceptrons were connected in ways inspired by the connection of neurons in the brain. At the time, this approach was most associated with Frank Rosenblatt. While there was initial excitement about both visions, the first came to dominate, and did so for decades, with some successes, including so-called expert systems.Not only did this approach benefit from championing by its advocates and plentiful funding, it came with the suggested weight of a long intellectual tradition-exemplified by Descartes, Boole, Frege, Russell, and Church, among others-that sought to manipulate symbols and to formalize and axiomatize knowledge and reasoning. It was only in the late 1980s that interest began to grow again in the second vision, largely through the work of David Rumelhart, Geoffrey Hinton, James McClelland, and others. The history of these two visions and the associated philosophical ideas are discussed in Hubert Dreyfus and Stuart Dreyfus's 1988 Dædalus essay "Making a Mind Versus Modeling the Brain: Artificial Intelligence Back at a Branchpoint."20 Since then, the approach to intelligence based on learning, the use of statistical methods, back-propagation, and training (supervised and unsupervised) has come to characterize the current dominant approach.Kevin Scott, in his essay "I Do Not Think It Means What You Think It Means: Artificial Intelligence, Cognitive Work & Scale," reminds us of the work of Ray Solomonoff and others linking information and probability theory with the idea of machines that can not only learn, but compress and potentially generalize what they learn, and the emerging realization of this in the systems now being built and those to come. The success of the machine learning approach has benefited from the boon in the availability of data to train the algorithms thanks to the growth in the use of the Internet and other applications and services. In research, the data explosion has been the result of new scientific instruments and observation platforms and data-generating breakthroughs, for example, in astronomy and in genomics. Equally important has been the co-evolution of the software and hardware used, especially chip architectures better suited to the parallel computations involved in data- and compute-intensive neural networks and other machine learning approaches, as Dean discusses.Several authors delve into progress in key subfields of AI.21 In their essay, "Searching for Computer Vision North Stars," Fei-Fei Li and Ranjay Krishna chart developments in machine vision and the creation of standard data sets such as ImageNet that could be used for benchmarking performance. In their respective essays "Human Language Understanding & Reasoning" and "The Curious Case of Commonsense Intelligence," Chris Manning and Yejin Choi discuss different eras and ideas in natural language processing, including the recent emergence of large language models comprising hundreds of billions of parameters and that use transformer architectures and self-supervised learning on vast amounts of data.22 The resulting pretrained models are impressive in their capacity to take natural language prompts for which they have not been trained specifically and generate human-like outputs, not only in natural language, but also images, software code, and more, as Mira Murati discusses and illustrates in "Language & Coding Creativity." Some have started to refer to these large language models as foundational models in that once they are trained, they are adaptable to a wide range of tasks and outputs.23 But despite their unexpected performance, these large language models are still early in their development and have many shortcomings and limitations that are highlighted in this volume and elsewhere, including by some of their developers.24In "The Machines from Our Future," Daniela Rus discusses the progress in robotic systems, including advances in the underlying technologies, as well as in their integrated design that enables them to operate in the physical world. She highlights the limitations in the "industrial" approaches used thus far and suggests new ways of conceptualizing robots that draw on insights from biological systems. In robotics, as in AI more generally, there has always been a tension as to whether to copy or simply draw inspiration from how humans and other biological organisms achieve intelligent behavior. Elsewhere, AI researcher Demis Hassabis and colleagues have explored how neuroscience and AI learn from and inspire each other, although so far more in one than the other, as and have the success of the current approaches to AI, there are still many shortcomings and as well as problems in It is useful to on one such as when AI does not as or or or that can to or when it on or information about the world, or when it has such as of all of which can to a of public shortcomings have captured the attention of the wider public and as well as among there is an on AI and In recent years, there has been a of to principles and approaches to AI, as well as involving and such as the on AI, that to best important has been the of with to and - in the and developing AI in both and as has been well in recent This is an important in its own but also with to the of the resulting AI and, in its intersections with more the other there are limitations and problems associated with the that AI is not capable of if could to more more or more general AI. In their Turing deep learning and Geoffrey took of where deep learning and highlighted its current such as the with In the case of natural language processing, Manning and Choi the challenges in and despite the of large language Elsewhere, and have the notion that large language models do anything learning, or In & of in a and discuss the problems in systems, the as how to reason about other their systems, and well as challenges in both and especially when the include both humans and Elsewhere, and others a useful of the problems in there is a growing among many that we do not have for the of AI systems, especially as they become more capable and the of use although AI and its related techniques are to be powerful tools for research in science, as examples in this volume and recent examples in which AI not only help results but also by design and become what some have AI to science and and to and challenges for the possibility that more powerful AI could to new in science, as well as progress in some of challenges and has long been a key for many at the frontier of AI research to more capable the of each of AI, the of more general problems that to the possibility of more capable AI learning, reasoning, of and and of these and other problems that could to more capable systems the of whether current characterized by deep learning, the of and and more foundational and and reinforcement or whether different approaches are in such as cognitive agent approaches or or based on logic and probability theory, to name a few. whether and what of approaches be the AI is but many the current along with of and learning architectures have to their about the of the current approaches is associated with the of whether artificial general intelligence can be and if how and Artificial general intelligence is in to what is called that AI and for tasks and goals, such as The development of on the other aims for more powerful AI - at as powerful as is generally to problem or and, in some the capacity to and improve as well as set and its own and the of and when will be is a for most that its achievement have and as is often in and such as A through and The to Ex and it is or there is growing among many at the frontier of AI research that we for the possibility of powerful with to and and with humans, its and use, and the possibility that of could and that we these into how we approach the development of of the research and development, and in AI is of the AI and in its what Nigel Shadbolt the of AI. This is given the for useful and applications and the for in sectors of the However, a few have made the development of their the most of these are and each of which has demonstrated results of increasing still a long way from the most discussed impact of AI and automation is on and the future of This is not In in the of the excitement about AI and and concerns about their impact on a on and the was that such technologies were important for growth and and "the that but not Most recent of this including those I have been involved have and that over time, more are than are that it is the and the and the of will the In their essay AI & and John discuss these for work and further, in & the of & to discuss the with to and and as well as the opportunities that are especially in developing In "The Turing The & of Artificial Intelligence," discusses how the use of human benchmarks in the development of AI the of AI that rather than human He that the AI's development will take in this and resulting for will on the for companies, and a that the that more will be than too much from of the and does not far enough into the future and at what AI will be capable The for AI could from of that in the is and labor and ability to are and and until automation has mostly physical and but that AI will be on more cognitive and tasks based on and, if early examples are even tasks are not of the In other are now in the world machines that that learn and that their ability to do these is to a range of problems they can will be with the range to which the human has been This was and Allen Newell in that this time could be different usually two that new labor will in which will by other humans for their own even when machines may be capable of these as well as or even better than The other is that AI will create so much and all without the for human and the of will be to for when that will the that once the first time since his creation will be with his his to use his from how to the which science and interest will have for to live and and However, most researchers that we are not to a future in which the of will and that until then, there are other and that be in the labor now and in the such as and other and how humans work increasingly capable that and John and discuss in this are not the only of the by AI. Russell a of the potentially from artificial general intelligence, once a of or ten But even we to general-purpose AI, the opportunities for companies and, for the and growth as well as from AI and its related technologies are more than to pursuit and by companies and in the development, and use of AI. At the many the is it is generally that is a in AI, as by its growth in AI research, and as highlighted in several will have for companies and given the of such technologies as discussed by and others the may in the way of approaches to AI and (such as whether they are companies or as and have have the to to in AI. The role of AI in intelligence, systems, autonomous even and other of increasingly In &

  • Supplementary Content
  • Cite Count Icon 18
  • 10.34133/2022/9804014
Material Engineering in Gut Microbiome and Human Health
  • Jan 1, 2022
  • Research
  • Letao Yang + 5 more

Tremendous progress has been made in the past decade regarding our understanding of the gut microbiome's role in human health. Currently, however, a comprehensive and focused review marrying the two distinct fields of gut microbiome and material research is lacking. To bridge the gap, the current paper discusses critical aspects of the rapidly emerging research topic of “material engineering in the gut microbiome and human health.” By engaging scientists with diverse backgrounds in biomaterials, gut-microbiome axis, neuroscience, synthetic biology, tissue engineering, and biosensing in a dialogue, our goal is to accelerate the development of research tools for gut microbiome research and the development of therapeutics that target the gut microbiome. For this purpose, state-of-the-art knowledge is presented here on biomaterial technologies that facilitate the study, analysis, and manipulation of the gut microbiome, including intestinal organoids, gut-on-chip models, hydrogels for spatial mapping of gut microbiome compositions, microbiome biosensors, and oral bacteria delivery systems. In addition, a discussion is provided regarding the microbiome-gut-brain axis and the critical roles that biomaterials can play to investigate and regulate the axis. Lastly, perspectives are provided regarding future directions on how to develop and use novel biomaterials in gut microbiome research, as well as essential regulatory rules in clinical translation. In this way, we hope to inspire research into future biomaterial technologies to advance gut microbiome research and gut microbiome-based theragnostics.

  • Research Article
  • Cite Count Icon 15
  • 10.3390/healthcare13060648
Advancing Diabetic Foot Ulcer Care: AI and Generative AI Approaches for Classification, Prediction, Segmentation, and Detection.
  • Mar 16, 2025
  • Healthcare (Basel, Switzerland)
  • Suhaylah Alkhalefah + 2 more

Background: Diabetic foot ulcers (DFUs) represent a significant challenge in managing diabetes, leading to higher patient complications and increased healthcare costs. Traditional approaches, such as manual wound assessment and diagnostic tool usage, often require significant resources, including skilled clinicians, specialized equipment, and extensive time. Artificial intelligence (AI) and generative AI offer promising solutions for improving DFU management. This study systematically reviews the role of AI in DFU classification, prediction, segmentation, and detection. Furthermore, it highlights the role of generative AI in overcoming data scarcity and potential of AI-based smartphone applications for remote monitoring and diagnosis. Methods: A systematic literature review was conducted following the PRISMA guidelines. Relevant studies published between 2020 and 2025 were identified from databases including PubMed, IEEE Xplore, Scopus, and Web of Science. The review focused on AI and generative AI applications in DFU and excluded non-DFU-related medical imaging articles. Results: This study indicates that AI-powered models have significantly improved DFU classification accuracy, early detection, and predictive modeling. Generative AI techniques, such as GANs and diffusion models, have demonstrated potential in addressing dataset limitations by generating synthetic DFU images. Additionally, AI-powered smartphone applications provide cost-effective solutions for DFU monitoring, potentially improving diagnosis. Conclusions: AI and generative AI are transforming DFU management by enhancing diagnostic accuracy and predictive capabilities. Future research should prioritize explainable AI frameworks and diverse datasets for AI-driven healthcare solutions to facilitate broader clinical adoption.

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  • Research Article
  • Cite Count Icon 28
  • 10.1186/s40793-018-0308-0
The current state and future direction of DoD gut microbiome research: a summary of the first DoD gut microbiome informational meeting
  • Mar 20, 2018
  • Standards in Genomic Sciences
  • Steven Arcidiacono + 12 more

The gut microbiome is increasingly recognized as integral to human health, and is emerging as a mediator of human physical and cognitive performance. This has led to the recognition that US Department of Defense (DoD) research supporting a healthy and resilient gut microbiome will be critical to optimizing the health and performance of future Warfighters. To facilitate knowledge dissemination and collaboration, identify resource capabilities and gaps, and maximize the positive impact of gut microbiome research on the Warfighter, DoD partners in microbiome research participated in a 2-day informational meeting co-hosted by the Natick Soldier Research, Engineering and Development Center (NSRDEC) and the US Army Research Institute of Environmental Medicine (USARIEM) on 16–17 November 2015. Attendee presentations and discussions demonstrated that multiple DoD organizations are actively advancing gut microbiome research. Common areas of research included the influence of military-relevant stressors on interactions between the microbiome and Warfighter biology, manipulation of the microbiome to influence Warfighter health, and use of the microbiome as a biomarker of Warfighter health status. Although resources and capabilities are available, they vary across laboratories and it was determined that centralizing certain DoD capabilities could accelerate progress. More significantly, the meeting created a foundation for a coordinated gut microbiome and nutrition research program aligning key DoD partners in the area of microbiome research. This report details the presentations and discussions presented during the 1st DoD Gut Microbiome Informational Meeting.

  • Research Article
  • Cite Count Icon 1
  • 10.30574/wjarr.2025.25.3.0845
Accelerating drug discovery with generative AI: Aa paradigm shift in pharmaceutical innovation and development
  • Mar 30, 2025
  • World Journal of Advanced Research and Reviews
  • Narendra Kandregula

The clinical process to produce innovative medications generally spans over 10 years and billions of dollars from several businesses. The strength of computational chemistry and molecular modeling has improved nevertheless the conventional medical approaches deal with several important challenges due to their high failure numbers and their inability to find good medication candidates. The pharmaceutical business benefits from AI innovation through Generative AI since it offers a huge breakthrough in research capacity. Generative AI uses deep learning architectures VAEs GANs and Transformer-based systems to enable expedited drug discovery through quick chemical design and optimal drug characteristics alongside accurate biological interactions predictions. This research analyzes Generative AI's major influence on pharmaceutical science as it quickens the processes of identifying new medications. The application of AI models helps researchers to build new chemical structures while forecasting their medication performance behaviors and deliver more strong lead compounds at a better speed than old methodologies. Generative AI leads to the production of improved medication candidates with superior efficiency and decreased toxicity according to studies from Insilico Medicine and BenevolentAI and DeepMind’s AlphaFold. AI simulations offer automated drug screening combined with cost-efficient experimental approaches which boost the success rate of clinical trials. The clinical process to produce innovative medications generally spans over 10 years and billions of dollars from several businesses. The strength of computational chemistry and molecular modeling has improved nevertheless the conventional medical approaches deal with several important challenges due to their high failure numbers and their inability to find good medication candidates. Artificial Intelligence (AI) created new study opportunities in the pharmaceutical field while Generative AI stands as a revolutionary concept change. The deep learning algorithms known as Variational Autoencoders (VAEs) Generative Adversarial Networks (GANs) along with Transformer-based models in Generative AI showcase impressive capabilities to expedite drug discovery by developing molecules swiftly and improving drug characteristics as well as accurately forecasting biological drug interactions. The material offered in this study examines Generative AI's use in pharmaceutical innovation with an emphasis on its capacity to speed up drug discovery processes. The application of AI-driven models enables scientists to generate new chemical structures which following prediction of pharmacokinetic and pharmacodynamic features results in improved optimized lead compounds development rates beyond traditional methods. Generative AI leads to the production of improved medication candidates with superior efficiency and decreased toxicity according to studies from Insilico Medicine and BenevolentAI and DeepMind’s AlphaFold. AI simulations offer automated drug screening combined with cost-efficient experimental approaches which boost the success rate of clinical trials.

  • Research Article
  • Cite Count Icon 1
  • 10.63619/ijais.v1i1.005
AI Meets Chemistry: Unlocking New Frontiers in Molecular Design and Reaction Prediction
  • Mar 17, 2025
  • International Journal of Artificial Intelligence for Science (IJAI4S)
  • Amit Kumar Mishra + 1 more

Artificial intelligence (AI) is revolutionising chemical research by significantly enhancing automated experimental processes, reaction prediction, and molecular design. Despite these advances, problems with data quality, computational resource limitations, and model interpretability persist. In order to further speed up chemical discoveries and advances, prospects include creating hybrid AI models, quantum AI, and multimodal frameworks. Using artificial intelligence (AI) to significantly improve automated experimental procedures, reaction prediction, and molecular design is revolutionising chemical research. Creating hybrid AI models, quantum AI and multimodal frameworks is a potential future avenue to accelerate chemical discoveries and further advances. Chemical research is being revolutionised by artificial intelligence (AI), which is significantly enhancing automated experimental procedures, reaction prediction, and molecular design. Recent advances in generative AI methods, such as diffusion models, GANs, and variational autoencoders (VAEs) that aid in creating unique molecular structures, are the main focus of this review effort. To increase the precision of reaction predictions, transformer-based designs and graph neural networks (GNNs) are being investigated. Some challenges remain, including low-quality data, a lack of processing capacity, and concerns over the model’s interpretability. The creation of hybrid AI models, quantum AI, and multimodal frameworks, among other exciting study topics, could accelerate future developments in chemistry.

  • Research Article
  • Cite Count Icon 23
  • 10.1002/cjce.25525
Artificial intelligence and machine learning at various stages and scales of process systems engineering
  • Nov 6, 2024
  • The Canadian Journal of Chemical Engineering
  • Karthik Srinivasan + 7 more

We review the utility and application of artificial intelligence (AI) and machine learning (ML) at various process scales in this work, from molecules and reactions to materials to processes, plants, and supply chains; furthermore, we highlight whether the application is at the design or operational stage of the process. In particular, we focus on the distinct representational frameworks employed at the various scales and the physics (equivariance, additivity, injectivity, connectivity, hierarchy, and heterogeneity) they capture. We also review AI techniques and frameworks important in process systems, including hybrid AI modelling, human‐AI collaborations, and generative AI techniques. In hybrid AI models, we emphasize the importance of hyperparameter tuning, especially in the case of physics‐informed regularization. We highlight the importance of studying human‐AI interactions, especially in the context of automation, and distinguish the features of human‐complements‐AI systems from those of AI‐complements‐human systems. Of particular importance in the AI‐complements‐human framework are model explanations, including rule‐based explanation, explanation‐by‐example, explanation‐by‐simplification, visualization, and feature relevance. Generative AI methods are becoming increasingly relevant in process systems engineering, especially in contexts that do not belong to ‘big data’, primarily due to the lack of high quality labelled data. We highlight the use of generative AI methods including generative adversarial networks, graph neural networks, and large language models/transformers along with non‐traditional process data (images, audio, and text).

  • Research Article
  • Cite Count Icon 3
  • 10.32996/jcsts.2024.6.4.14
The Role of AI in Shaping Our Future: Super-Exponential Growth, Galactic Civilization, and Doom
  • Oct 16, 2024
  • Journal of Computer Science and Technology Studies
  • Luka Baklaga

The present study investigates the potential impact of artificial intelligence (AI) on the future trajectory of human civilization. It focuses on topics such as super-exponential growth, the potential emergence of a galactic civilization, and the associated "doom" hazards. A significant advancement in machine intelligence with human-like consciousness, strong artificial intelligence (AI), also known as artificial general intelligence (AGI), creates new opportunities and capacities. There's growing anxiety about the risk that weak AI will eventually become strong AI. Every year, new transformer models that are more like human interactions are being created, and we have already witnessed some indications of AGI. It is anticipated that AI will reach a "singularity" and advance on its own without assistance from humans. This thesis explores the theoretical and practical foundations, model building blocks, development processes, challenges, and ethical issues surrounding the creation of Consciousness AI (AGI). This paper examines the meaning of the term "technological singularity," the various types of singularities that have no point of return idea, the philosophical risks associated with the development of AI, and the implications of AI singularity for monetary theory and the new economic order. As a new perspective on the deployment of ethical AI in the face of tremendous technological advancements, the study not only contributes to the theoretical discourse but also explores the possible practical implications of AI on our shared future. Several obstacles to AI advancement are covered in the paper, along with prospective directions for future research.

  • Research Article
  • Cite Count Icon 1
  • 10.1152/advan.00119.2025
Concepts behind clips: cinema to teach the science of artificial intelligence to undergraduate medical students.
  • Dec 1, 2025
  • Advances in physiology education
  • Krishna Mohan Surapaneni

As artificial intelligence (AI) is becoming more integrated into the field of healthcare, medical students need to learn foundational AI literacy. Yet, traditional, descriptive teaching methods of AI topics are often ineffective in engaging the learners. This article introduces a new application of cinema to teaching AI concepts in medical education. With meticulously chosen movie clips from "Enthiran (Tamil)/Robot (Hindi)/Robo (Telugu)" movie, the students were introduced to the primary differences between artificial narrow intelligence (ANI), artificial general intelligence (AGI), and artificial super intelligence (ASI). This method triggered encouraging responses from students, with learners indicating greater conceptual clarity and heightened interest. Film as an emotive and visual medium not only makes difficult concepts easy to understand but also encourages curiosity, ethical consideration, and higher order thought. This pedagogic intervention demonstrates how narrative-based learning can make abstract AI systems more relatable and clinically relevant for future physicians. Beyond technical content, the method can offer opportunities to cultivate critical engagement with ethical and practical dimensions of AI in healthcare. Integrating film into AI instruction could bridge the gap between theoretical knowledge and clinical application, offering a compelling pathway to enrich medical education in a rapidly evolving digital age.NEW & NOTEWORTHY This article introduces a new learning strategy that employs film to instruct artificial intelligence (AI) principles in medical education. By introducing clips the from "Enthiran (Tamil)/Robot (Hindi)/Robo (Telugu)" movie to clarify artificial narrow intelligence (ANI), artificial general intelligence (AGI), and artificial super intelligence (ASI), the approach converted passive learning into an emotionally evocative and intellectually stimulating experience. Students experienced enhanced comprehension and increased interest in artificial intelligence. This narrative-driven, visually oriented process promises to incorporate technical and ethical AI literacy into medical curricula with enduring relevance and impact.

  • Research Article
  • 10.25159/2663-5895/20450
Artificial Intelligence for Inclusive Education: A Game Changer or Window Dresser?
  • Dec 30, 2025
  • Progressio
  • Ben De Souza + 1 more

Since the generative Artificial Intelligence (AI) became publicly available in 2022, attention has centred on its potential for inclusion in education. However, how AI has already started to revolutionise and might further transform inclusive education remains largely speculative. This prompts a crucial question: Is AI a genuine game changer or merely window dressing? Some window dressing can be deceptive. Once inside the shop, you realise that nothing is worth your time or falls within your budget. This is similar to the current hype surrounding AI for inclusive education. The study employed the window dressing metaphor, underpinned by Pinar’s currere theory, to explore AI’s opportunities and challenges for inclusivity. Methodologically, the study involved a narrative review of the global literature focused on the conceptualisation of AI and disability inclusion in education, with implications for South Africa. Both empirical and conceptual studies indicate that generative AI is seen as a potential game changer. However, a critical analysis of these studies revealed they have not sufficiently engaged with or clearly defined how AI might redefine teaching and learning processes in inclusive settings. The article argues that AI will only be a true game changer for inclusivity if its conceptualisation is linked to the mediation processes essential to inclusive education. Therefore, this article presents a situated strategy that generative AI can use to facilitate learning for students with inclusive educational needs. This strategy could genuinely make AI a game changer, and it should be integrated with ongoing efforts to mainstream Information and Communication Technology in education.

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  • Research Article
  • Cite Count Icon 375
  • 10.1057/s41599-020-0494-4
Why general artificial intelligence will not be realized
  • Jun 17, 2020
  • Humanities and Social Sciences Communications
  • Ragnar Fjelland

The modern project of creating human-like artificial intelligence (AI) started after World War II, when it was discovered that electronic computers are not just number-crunching machines, but can also manipulate symbols. It is possible to pursue this goal without assuming that machine intelligence is identical to human intelligence. This is known as weak AI. However, many AI researcher have pursued the aim of developing artificial intelligence that is in principle identical to human intelligence, called strong AI. Weak AI is less ambitious than strong AI, and therefore less controversial. However, there are important controversies related to weak AI as well. This paper focuses on the distinction between artificial general intelligence (AGI) and artificial narrow intelligence (ANI). Although AGI may be classified as weak AI, it is close to strong AI because one chief characteristics of human intelligence is its generality. Although AGI is less ambitious than strong AI, there were critics almost from the very beginning. One of the leading critics was the philosopher Hubert Dreyfus, who argued that computers, who have no body, no childhood and no cultural practice, could not acquire intelligence at all. One of Dreyfus’ main arguments was that human knowledge is partly tacit, and therefore cannot be articulated and incorporated in a computer program. However, today one might argue that new approaches to artificial intelligence research have made his arguments obsolete. Deep learning and Big Data are among the latest approaches, and advocates argue that they will be able to realize AGI. A closer look reveals that although development of artificial intelligence for specific purposes (ANI) has been impressive, we have not come much closer to developing artificial general intelligence (AGI). The article further argues that this is in principle impossible, and it revives Hubert Dreyfus’ argument that computers are not in the world.

  • Research Article
  • 10.57237/j.cst.2024.03.004
A Review of the Latest Research Achievements in the Basic Theory of Generative AI and Artificial General Intelligence (AGI)
  • Sep 9, 2024
  • Computer Science and Technology
  • Xiaohui Zou

This paper focuses on generative AI, a typical representative of contemporary artificial intelligence (AI) and artificial general intelligence (AGI), aiming to delve into the latest research progress in its basic theory. The research method involves a comparative analysis of the differences in underlying logic and formal understanding between traditional AI and Current AI, further exploring the distinctions between the three core viewpoints of traditional AI (symbolism, connectionism, behaviorism) and the three major schools of Current AI (generative AI/AGI based on large language models (LLMs) such as ChatGPT; new quality productive force AGI characterized by small models, such as I3DNA; and twin Turing machines based on dual formal understanding models that are compatible with both large and small models). The research reveals the core components of the basic theory of AI and AGI: bit-list logic, linkage functions, followed by generalized bilingualism or generalized translation based on digital and intelligent text with the three fundamental laws. The significance of this research lies in not only enhancing the interpretability of generative AI/AGI based on LLMs represented by ChatGPT but also providing generalized translations for the new quality productive force AGI characterized by small models and its complex theories of cosmic intelligence and the universal model series. At the same time, it demonstrates the potential of twin Turing machines as inclusive intelligent agents in integrating data, knowledge, computing power, algorithms, and human-computer mutual assistance in the new era of cognitive paradigms, laying the foundation for constructing super intelligent systems.

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