Abstract

Precise control of the cell cycle is central to the physiology of all cells. In prior work we demonstrated that archaeal cells maintain a constant size; however, the regulatory mechanisms underlying the cell cycle remain unexplored in this domain of life. Here, we use genetics, functional genomics, and quantitative imaging to identify and characterize the novel CdrSL gene regulatory network in a model species of archaea. We demonstrate the central role of these ribbon-helix-helix family transcription factors in the regulation of cell division through specific transcriptional control of the gene encoding FtsZ2, a putative tubulin homolog. Using time-lapse fluorescence microscopy in live cells cultivated in microfluidics devices, we further demonstrate that FtsZ2 is required for cell division but not elongation. The cdrS-ftsZ2 locus is highly conserved throughout the archaeal domain, and the central function of CdrS in regulating cell division is conserved across hypersaline adapted archaea. We propose that the CdrSL-FtsZ2 transcriptional network coordinates cell division timing with cell growth in archaea.IMPORTANCE Healthy cell growth and division are critical for individual organism survival and species long-term viability. However, it remains unknown how cells of the domain Archaea maintain a healthy cell cycle. Understanding the archaeal cell cycle is of paramount evolutionary importance given that an archaeal cell was the host of the endosymbiotic event that gave rise to eukaryotes. Here, we identify and characterize novel molecular players needed for regulating cell division in archaea. These molecules dictate the timing of cell septation but are dispensable for growth between divisions. Timing is accomplished through transcriptional control of the cell division ring. Our results shed light on mechanisms underlying the archaeal cell cycle, which has thus far remained elusive.

Highlights

  • Precise control of the cell cycle is central to the physiology of all cells

  • We developed live-cell, time-lapse microscopy methods for hypersaline-adapted archaea to overcome the challenges of rapid salt crystallization on microscopy slides [27]

  • VNG0194H is predicted to encode a small 55-amino-acid, single-domain protein that exhibits Ͼ99% structural homology to other ribbon-helix-helix (RHH) domain transcriptional regulators of the RHH_1 family (Pfam accession PF01402, E value of primary sequence homology 5.3 ϫ 10Ϫ5; 99.6% confidence in structural homology to transcription factor NikR), suggesting that it may function as a DNA binding transcriptional regulator or in protein-protein interactions [38]

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Summary

Introduction

In prior work we demonstrated that archaeal cells maintain a constant size; the regulatory mechanisms underlying the cell cycle remain unexplored in this domain of life. IMPORTANCE Healthy cell growth and division are critical for individual organism survival and species long-term viability It remains unknown how cells of the domain Archaea maintain a healthy cell cycle. We identify and characterize novel molecular players needed for regulating cell division in archaea These molecules dictate the timing of cell septation but are dispensable for growth between divisions. FtsZ in archaea appears to function as previous fluorescence imaging experiments in fixed [13,14,15,16] and live [17,18,19] hypersaline adapted archaeal cells (species Haloferax volcanii [Hfx. volcanii]) demonstrated Z-like rings forming at midcell. All known halophilic archaeal genomes encode multiple tubulin-like proteins [13, 20], so the function and mechanism of these proteins in cell division remain unclear

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