The marine fishes from southern Mindanao, Philippines, including a DNA barcode reference library of commercially important species

Abstract

The Philippines has been long known for its multispecies fisheries, and while there is a growing effort to document fish diversity, collections-based species inventories remain insufficient in southern Mindanao. Market survey efforts conducted in Pujada Bay, Davao Gulf, and Sarangani Bay in the last ten years resulted in documenting 556 species of marine fishes from 82 families, while underwater fish visual census (FVC) surveys conducted in Davao Gulf from 2019 to 2022 revealed 365 species in 42 families. Combining the data from market surveys, FVC, and published literature, we present 771 species of marine fishes (770 teleosts, 1 elasmobranch) belonging to 94 families. Of the 771 species documented, 130 are deep reef and deepwater species, while 20 species await further taxonomic investigations for species-level identifications.Moreover, 498 cytochrome oxidase I (COI) genetic barcodes were produced representing 357 species from 59 families, which covers 46% of the total number of species reported and 63% of the market survey data. Genetic distances based on taxonomic ranks were concordant with other barcoding studies on marine fishes. Samples (20 species) with pairwise genetic distances that did not conform with the expected intra- and interspecific threshold suggest cases that also need to be investigated further (e.g., incomplete lineage sorting, introgressive hybridization, crypticspeciation). All market survey data used in genetic barcoding correspond to tissue samples, live-color photographs, and preserved specimens. This work complements the DNA barcode libraries reported recently in the country, and this serves as an additional reference for future biodiversity management and conservation efforts.