Abstract
The integron is a genetic element that incorporates mobile genes termed gene cassettes into a reserved genetic site via site-specific recombination. It is best known for its role in antibiotic resistance with one type of integron, the class 1 integron, a major player in the dissemination of antibiotic resistance genes across Gram negative pathogens and commensals. However, integrons are ancient structures with over 100 classes (including class 1) present in bacteria from the broader environment. While, the class 1 integron is only one example of an integron being mobilized into the clinical environment, it is by far the most successful. Unlike clinical class 1 integrons which are largely found on plasmids, other integron classes are found on the chromosomes of bacteria and carry diverse gene cassettes indicating a non-antibiotic resistance role(s). However, there is very limited knowledge on what these alternative roles are. This is particularly relevant to Vibrio species where gene cassettes make up approximately 1–3% of their entire genome. In this review, we discuss how emphasis on class 1 integron research has resulted in a limited understanding by the wider research community on the role of integrons in the broader environment. This has the capacity to be counterproductive in solving or improving the antibiotic resistance problem into the future. Furthermore, there is still a significant lack of knowledge on how gene cassettes in Vibrio species drive adaptation and evolution. From research in Vibrio rotiferianus DAT722, new insight into how gene cassettes affect cellular physiology offers new alternative roles for the gene cassette resource. At least a subset of gene cassettes are involved in host surface polysaccharide modification suggesting that gene cassettes may be important in processes such as bacteriophage resistance, adhesion/biofilm formation, protection from grazers and bacterial aggregation.
Highlights
Members of the Vibrio genus are ubiquitous in marine environments and show a wide range of niche specialization (Thompson et al, 2004)
It is followed by subsequent incorporation of the DNA into the recipients’ genome such that DNA can be stably inherited, a process assisted by mechanisms such as homologous recombination or via a range of mobile genetic elements (MGEs) such as transposons and genomic islands (Stokes and Gillings, 2011)
This mini review will focus on one important MGE called the integron, an element commonly known for its role in antibiotic resistance
Summary
Members of the Vibrio genus are ubiquitous in marine environments and show a wide range of niche specialization (Thompson et al, 2004). LGT is the mechanism of DNA transfer from one bacterial cell to another without the requirement for cell division It is followed by subsequent incorporation of the DNA into the recipients’ genome such that DNA can be stably inherited, a process assisted by mechanisms such as homologous recombination or via a range of mobile genetic elements (MGEs) such as transposons and genomic islands (Stokes and Gillings, 2011). This mini review will focus on one important MGE called the integron, an element commonly known for its role in antibiotic resistance. Induction of intI can cause excision and rearrangement of a gene cassette(s) into a different position
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