Taxonomic redescription and molecular confirmation of Lutjanus rufolineatus (Acanthuriformes: Lutjanidae) from the Andaman Islands, India.

Sustainable forest management increasingly highlights the maintenance of biological diversity and requires up-to-date information on the occurrence and distribution of key ecological features in forest environments. European aspen (Populus tremula L.) is one key feature in boreal forests contributing significantly to the biological diversity of boreal forest landscapes. However, due to their sparse and scattered occurrence in northern Europe, the explicit spatial data on aspen remain scarce and incomprehensive, which hampers biodiversity management and conservation efforts. Our objective was to study tree-level discrimination of aspen from other common species in northern boreal forests using airborne high-resolution hyperspectral and airborne laser scanning (ALS) data. The study contained multiple spatial analyses: First, we assessed the role of different spectral wavelengths (455–2500 nm), principal component analysis, and vegetation indices (VI) in tree species classification using two machine learning classifiers—support vector machine (SVM) and random forest (RF). Second, we tested the effect of feature selection for best classification accuracy achievable and third, we identified the most important spectral features to discriminate aspen from the other common tree species. SVM outperformed the RF model, resulting in the highest overall accuracy (OA) of 84% and Kappa value (0.74). The used feature set affected SVM performance little, but for RF, principal component analysis was the best. The most important common VI for deciduous trees contained Conifer Index (CI), Cellulose Absorption Index (CAI), Plant Stress Index 3 (PSI3), and Vogelmann Index 1 (VOG1), whereas Green Ratio (GR), Red Edge Inflection Point (REIP), and Red Well Position (RWP) were specific for aspen. Normalized Difference Red Edge Index (NDRE) and Modified Normalized Difference Index (MND705) were important for coniferous trees. The most important wavelengths for discriminating aspen from other species included reflectance bands of red edge range (724–727 nm) and shortwave infrared (1520–1564 nm and 1684–1706 nm). The highest classification accuracy of 92% (F1-score) for aspen was achieved using the SVM model with mean reflectance values combined with VI, which provides a possibility to produce a spatially explicit map of aspen occurrence that can contribute to biodiversity management and conservation efforts in boreal forests.

PurposeThe genus Choricotyle, the largest in the diclidophoridean family, includes C. chrysophryi, whose taxonomic status remains ambiguous. This study aims to resolve this ambiguity by describing a new Choricotyle species, C. justinemusei n. sp. previously identified as C. cf. chrysophryi, and clarifying the taxonomic status of related congeneric species, particularly those reported from sparids in Mediterranean and Atlantic waters.MethodsChoricotyle justinemusei n. sp. was described based on Mediterranean specimens from the gills of Pagellus acarne, found in the Muséum National d'Histoire Naturelle, Paris. The species was differentiated from its congeners through morphological and anatomical features, including the presence or absence of a terminal lappet, and of ring organ, number of atrial hooks and of testes. Molecular analysis using cox1 sequences was also conducted to aid in species identification.ResultsChoricotyle justinemusei n. sp. was described and distinguished from other Choricotyle species by several key morphological traits and molecular sequences. The record of C. chrysophryi from Pagellus bogaraveo in Atlantic waters was reassigned to C. chrysophryisensu Llewellyn (1941). Furthermore, C. pagelli from P. bogaraveo was found to be distinct from C. chrysophryi sensu Llewellyn (1941), confirming the validity of both C. pagelli and C. chrysophryi as separate species, and the former was reinstated as a valid species. A differential diagnosis was also provided for C. marionis, reinstating it based on its original type-host, Spicara maena.ConclusionThis study clarifies the taxonomic status of C. chrysophryi and related species, describing C. justinemusei n. sp. and reinstating C. pagelli and C. marionis as valid species. These findings contribute to a more accurate understanding of Choricotyle species and their host specificity.

Genetic differentiation of Andaman Islanders and their relatedness to Nicobar Islanders

CH-2009 Neuchâtel, Switzerland 3Mushroom Biology and Fungal Biotechnology Laboratory, School of Agricultureand Environmental Sciences, North Carolina Agricultural and Technical State University, Greensboro, NC 27411, USA4M.G. Kholodny Institute of Botany, National Academy of Sciences of Ukraine, 2 Tereshchenkivska St., Kiev 01601, UkraineCorresponding authors: E-mails: *gbarseghyan@gmail.com **akosakyan@yahoo.comABSTRACTThe relationships among species within Morchella and Macrolepiota were studied using nrDNA ITS and EF-1α sequences from 50 samples belonging to genera Gyromitra, Distiotis, Morchella, and Verpa; and 58 samples belonging to genera Macrolepiota, Leucoagaricus, and Chlorophyllum species from diff erentgeographical areas. Maximum parsimony, maximum likelihood, and the Bayesian approach were conducted in order to build the phylogeny of these genera. Both genera appeared to be monophyletic; however, several ingroups appeared to be polyphyletic. The relationship of species within the genus Morchella was investigated using both molecular (nrDNA ITS and EF-1α) and morphological characteristics in order to re-evaluate the taxonomic position of several controversial species for which the taxonomic status is still unclear. Results showed that the genus Morchella is a complex of several species, which was separated into two main distinct groups: yellow (M. crassipes, M. esculenta s. str. and M. spongiola) and black morels [(M. elata s. str., M. costata, M. gigas, and M. vulgaris (= M. conica)]. Results supported evidence that Morchella elata and M. angusticeps are identical taxa, which was proposed in earlier publications. Morphological data together with molecular data did not support the proposals that M. esculenta and M. crassipes are the same species. After phylogenetic studies, the list of Morchella species of Israel was re-evaluated, and are currently represented by Morchella elata, M. esculenta, M. rufobrunnea, and M. vulgaris (=M. conica). e relationship of Macrolepiota species to one another within the genus was investigated using both molecular (nrDNA ITS and EF-1 alpha sequences) and morphological characteristics. e results supported evidence to transfer M. rachodes into the genus Chlorophyllum, which was proposed by earlier publications. M. fuliginosa and M. rhodosperma appear to be identical. Morphological data together with molecular data did not support the proposals to treat M. mastoidea and its closely related species as one taxon. e list of Macrolepiota species of Israel was re-evaluated, which is currently represented by M. affi nis, M. excoriata, M. excoriata var. rubescens, M. fuligineosquarrosa, M. konradii, M. mastoidea, M. procera, M. procera var. mediterranea, M. prominens, M. psammophila, M. rickenii, and M. subsquarrosa. Macrolepiota oliveri and M. rachodes were transferred to the genus Chlorophyllum. It was shown that for Morchella, EF-1α is informative, whereas for Macrolepiota – this is hardly so. With the topology presented for Macrolepiota based on EF-1α, it is logical to conclude that this marker is not that suitable for the resolution of species complexes that are closely related in this particular taxon, genus Macrolepiota. However, assuming that the complexes should be treated as the same species is probably premature.

The taxonomic status of the large-sized Fejervarya frogs of the Andaman and Nicobar Islands was assessed based on integrative analysis of molecular, morphological and acoustic data. Our results identify the population from the Andaman Islands as Fejervarya moodiei, and that from the Nicobar Islands as F. limnocharis. Representative specimens collected during this study are described along with observations on their natural history. The distribution of F. moodiei within the Andaman Islands and F. limnocharis in the Nicobar Islands recorded during this study are mapped, suggesting that these species are fairly widespread.

Environmental DNA surveys have become a well‐established tool for detecting natural communities, showing excellent promise for supporting biodiversity monitoring, conservation, and management efforts. Africa is a continent of exceptional biodiversity, threatened not only by anthropogenic pressures but also by a general lack of research capacity and infrastructure, limiting evaluation and monitoring of ecosystems. This commentary explores the use of environmental DNA in surveying natural diversity, a rapidly moving field, within the context of capturing Africa's natural capital. Through an extensive literature search and filtering, 65 papers from 22 countries were identified, with research from Madagascar and Africa forming the bulk of the literature (~38%), with many countries only represented by one to three papers. There was a diverse range of studies, with more than half reporting on communities or diet analyses; freshwater and marine research are underrepresented, accounting for ~5% of studies. There were some papers on disease monitoring, particularly in freshwater. Disturbingly, representation of authors was highly skewed and highlights the ongoing inequality of scientific publishing and the extent of parachute science; one‐third of papers (n = 21) reported no African representation, in contrast with the 18 papers that had either first or senior authors affiliated with an institution in Africa. The remainder of the papers (n = 27) had at least one author affiliated with an African institution. In addition, less than half of papers reported appropriate sampling permits. Importantly and with a concerted global effort, building long‐term capacity, through meaningful and equitable relationships will help increase self‐sustaining science around technologies based on eDNA, thus ensuring not only biodiversity but also humanitarian benefits across Africa.

Indonesia is renowned for having some of the highest biodiversity levels in the world, which includes a wide variety of fern species (Pteridophyta). This study aims to identify and describe the fern species found in the Lemor Botanical Forest Area, East Lombok. The research used a descriptive-exploratory method with a cruise method approach, allowing direct observation and sampling in the field. The results showed a total of 9 fern families belonging to 20 species, with 50 individual plants recorded. The dominant family found was Pteridaceae, comprising 5 species. The species diversity was analyzed using the Shannon-Wiener diversity index, which yielded a value of 2.86, indicating a moderate level of species diversity. These findings demonstrate the ecological potential of the Lemor Botanical Forest Area in supporting the sustainability of fern species, and provide important baseline data for future biodiversity conservation and management efforts in tropical forest ecosystems. In conclusion, in the Lemor Botanical Garden Forest area of East Lombok, 9 families of ferns have been identified.

While the utility of environmental DNA (eDNA) metabarcoding surveys for biodiversity monitoring continues to be demonstrated, the spatial and temporal variability of eDNA, and thus the limits of the differentiability of an eDNA signal, remains under‐characterized. In this study, we collected eDNA samples from distinct micro‐habitats (~40 m apart) in a rocky intertidal ecosystem over their exposure period in a tidal cycle. During this period, the micro‐habitats transitioned from being interconnected, to physically isolated, to interconnected again. Using a well‐established eukaryotic (cytochrome oxidase subunit I) metabarcoding assay, we detected 415 species across 28 phyla. Across a variety of univariate and multivariate analyses, using exclusively taxonomically assigned data as well as all detected amplicon sequence variants (ASVs), we identified unique eDNA signals from the different micro‐habitats sampled. This differentiability paralleled expected ecological gradients and increased as the sites became more physically disconnected. Our results demonstrate that eDNA biomonitoring can differentiate micro‐habitats in the rocky intertidal only 40 m apart, that these differences reflect known ecology in the area, and that physical connectivity informs the degree of differentiation possible. These findings showcase the potential power of eDNA biomonitoring to increase the spatial and temporal resolution of marine biodiversity data, aiding research, conservation, and management efforts.

The failure to meet global biodiversity targets clearly indicates the need for biodiversity management and conservation efforts to be more effective, and this in turn requires better understanding of the current barriers to success. Islands are known as biodiversity hotspots but nowhere has biodiversity loss been so acute as in island ecosystems. To identify the barriers to effective island ecosystem conservation, we conducted 32 semistructured interviews with conservation and management practitioners from island nations in the Western Indian Ocean region. Practitioners described 33 barriers to meeting their objectives under 12 overarching topics and suggested 14 solutions to these. Most barriers described by interviewees existed at organization level (55%), followed by national (24%) and site/project level (21%). Of the 33 barriers described by practitioners, the most commonly associated cause was limited capacity (23.5%), followed by lack of government coordination and limited resources (both 21.6%), lack of incentives (11.8%), poor leadership (11.7%), and finally interpersonal issues interfering with progress (9.8%). Most solutions centered around bridging capacity gaps. By defining these barriers, we can bring them forward for discussion and allocate resources and efforts to bridging them. Only by doing so can we increase the effectiveness of our management efforts and maximize our chances of achieving global biodiversity targets.

Abstract. Riani S, Prabowo RE, Nuryanto A. 2021. Molecular characteristics and taxonomic status of morphologically similar barnacles (Amphibalanus) assessed using the cytochrome c oxidase 1 gene. Biodiversitas 22: 1456-1466. Amphibalanus variegatus and A. reticulatus have similar external morphology. Morphological similarities can be a severe problem for direct species-level identification. The problem can be overcome through anatomy-based identification and validated through molecular barcoding. Molecular characterization using the cytochrome c oxidase 1 (COI) gene provides a useful tool for precise species identification. This study attempted to assess the molecular characteristics of morphologically similar barnacle (Amphibalanus) specimens collected at five localities in Indonesia to validate their taxonomic status. Forty-five barnacle specimens were collected during the field trips in Lampung, Jakarta, Semarang, Bali, and Lombok. The COI gene was amplified using LCO1490 and HCO2198 primers. The gene was sequenced using bidirectional sequencing at 1st base Asia. The specimens' taxonomic status was determined based on sequence identity, genetic distance, monophyly, nucleotide compositions, and nucleotides in a particular position. Shell shapes-based identification placed barnacle specimens into A. reticulatus. However, anatomical-based identification placed barnacle samples into two different anatomic groups, which was further validated by molecular data that two anatomic groups of Amphibalanus samples have significant differences in their COI gene. Based on the molecular characteristics, 43 samples were identified as A. reticulatus, while the two remaining samples were identified as A. variegatus.

Examining the ecological consequences of the late Quaternary megafaunal extinctions within biodiversity hotspots is crucial for our understanding of the potential consequences of contemporary extinctions. We present the first multi-species record of spores of coprophilous fungi (SCF) from Monquentiva and the high-Andean forests of Colombia to reconstruct Late Pleistocene and Holocene megafaunal abundance. Fossilised pollen and charcoal are used to examine the consequences of megafaunal declines on the surrounding vegetation and fire activity. Our SCF record indicates the presence of Pleistocene megafauna at least since 30,290 BP, with two waves of megafaunal decline at ca. 22,900 BP and 10,990 BP. At Monquentiva, megafaunal decline in the Early Holocene resulted in transitional non-analogue vegetation, loss of some herbivore-dispersed plant taxa, an encroachment of palatable and woody flora, and a rise in fire activity. Differences with other published South-American records suggest that ecological consequences of megafaunal declines were habitat-specific. Overall, we show that ecosystems in the eastern Colombian Cordillera were highly sensitive to the decline of megafaunal populations. Under the current biodiversity crisis, management and conservation efforts must account for the effects of local herbivore declines on plant dispersal, on fire activity, and the potential loss of ecosystem services.

Effective conservation of biodiversity should build on a strong basis of taxonomic and spatial distribution knowledge. The Carpathian Mountains, an iconic centre of biodiversity in temperate Europe, harbour a remarkable number of endemic vascular plants. Current knowledge on their taxonomic status, spatial distribution and genetic diversity is, however, incomplete. Research and conservation efforts have mostly been country specific, resulting in contrasting chorological knowledge and taxonomic acceptance between neighbouring countries, and differing conservation policies. Urgent synchronisation of cross-border conservation measures is required. Here, we present an overview of a new international project that will address these issues, outlining the current state of knowledge and theoretical background concerning Carpathian subendemics and endemics in order to improve their conservation status. The project involves partners from eight countries, working collaboratively in conservation, research and sharing of standardised data for the Carpathian flora. Long-term seed conservation of 500 species, with a focus on endemics, regionally endangered species and range-margin populations from the Carpathians, will be used as an effective measure for the conservation of Carpathian endemics and endangered species. Research focused on the biosystematics of selected taxa will increase our knowledge of the evolutionary processes involved in the origin of the Carpathian flora. Finally, the establishment of the Carpathian Research Network (CRN) provides an official framework for pooling, sharing and standardising scientific data on Carpathian endemics from different countries. The CRN is developing an online database of the distribution of selected species (The Carpathian Endemics Distribution Database, CEDD) including their intrinsic and extrinsic traits and current opinion on their taxonomic status. This will be used to produce a monograph on the Carpathians’ endemic flora.

Several attempts have recently been made to elucidate taxonomic status and phylogenetic relationships among the species and subspecies of sand boas of the genus Eryx throughout their distribution range, with no stable consensus about their taxonomy. Here the phylogenetic relationships among the populations of Eryx in Iran and adjacent areas are studied based on two mitochondrial markers (cytb and 16S). Sixteen morphological characters were examined for evaluation of morphological differences among major populations. Ecological niche modeling was applied to demonstrate the potential distribution of the populations in Iran. ENMtools was also used to measure the degree of niche overlap among the major populations in Iran. Based on phylogenetic reconstruction and considering the genetic distances with specimens from type localities, E. tataricus is a junior synonym of E. miliaris and the subspecies rank for E. m. nogaiorum seems to be invalid. Considering the genetic distance of populations in western Iran and Iraq, and the habitat and morphological differences among the populations of Eryx in western Iran, Iraq and Egypt, the population of Eryx in western Iran is suggested as a different species from E. jaculus, named here as Eryx sp. and the ones from Iraq as Eryx cf. jaculus. Here, the evaluation and revision of taxonomic status, distribution ranges and descriptions of morphological characters of the studied species have been done.

Assessment of coastal and mangrove vulnerability in the Andaman Island, Indian Ocean

The outcome of encounters between predators and prey affects predation rates and ultimately population dynamics. Determining how environmental features influence predation rates helps guide conservation and management efforts. We studied where gray wolves (Canis lupus Linnaeus, 1758) and coyotes (Canis latrans Say, 1823) killed white-tailed deer (Odocoileus virginianus (Zimmermann, 1780)) in northern Wisconsin, USA. We monitored 499 white-tailed deer for cause-specific mortality between 2011 and 2014 using VHF radio collars. We investigated the locations of 125 deer mortalities and determined that 63 were canid (wolf or coyote) kill sites. We analyzed spatial patterns of kill sites using resource selection functions in a model selection framework, incorporating environmental variables including vegetative cover, human development, snow depth, and water. We found no evidence that vegetative cover or human development affected predation risk; however, we did find that increasing snow depth resulted in increased relative predation risk. This finding is consistent with existing research on the influence of snow cover on white-tailed deer survival. Our results suggest that understanding the spatial and temporal patterns of white-tailed deer predation requires a better understanding of snow depth variation in space and time. As climate change scenarios predict changes in snowfall throughout the northern hemisphere, understanding the effect on predator–prey spatial dynamics will be important for management and conservation efforts.