Taxonomic diversity and floristic composition changes of East Asia during the early Paleogene

Climate seasonality may differently influence habitat quality and heterogeneity depending on habitat type. We examined whether the taxonomic, functional and phylogenetic composition of ground-dwelling anuran assemblages from grassland and forest habitats vary seasonally. We tested the hypothesis that the forest anuran assemblage varies less seasonally than the grassland assemblage. We monitored anurans using pitfall trap arrays in two areas, sampled across four seasons over a two-year period. For the functional composition, we acquired information on species morphology, reproduction, and habitat use to represent the anuran niche. For the phylogenetic composition, we used the most comprehensive anuran phylogeny. We used Principal Coordinate Analysis and Analysis of Variance to evaluate seasonal variations in assemblage composition along the study period. Our data revealed significant seasonal variation in the taxonomic and phylogenetic composition of anuran assemblages. Variation in taxonomic composition was higher in the grassland than in the forest assemblage, while variation in phylogenetic composition was higher in the spring-summer than in the autumn-winter seasons. We did not identify seasonal variation in functional composition. Seasonal variations in taxonomic and phylogenetic composition, but not in functional composition, indicate that the species with a fluctuating seasonal abundance have similar life-history traits, but belong to different lineages. Keywords: anuran traits, Brazilian highland grasslands, habitat variability, temporal beta diversity, temporal turnover.

Changes in wet meadow vegetation after 20 years of different management in a field experiment (North-West Germany)

There is considerable controversy around the patterns and processes that influence spatial variation in taxonomic composition in mountain environments. We analysed elevational variation in the taxonomic composition of epigaeic spider assemblages across five mountains in north-western Patagonia (Argentina) to examine the relative importance of dispersal (distance) limitation and environmental heterogeneity on a regional scale. The distance limitation hypothesis predicts greater taxonomic similarity between sampling sites separated by short geographical distances than between mountain peaks separated by longer distances, a lack of indicator species of macro-habitats, and weak associations between spider species composition and environmental gradients. Alternatively, the environmental heterogeneity hypothesis predicts that taxonomic differentiation will occur over short distances along elevation gradients in association with the turnover in major habitats and change in environmental conditions, and that indicator species will be present. We collected spiders using 486 pitfall traps arranged in fifty-four 100-m2 grid plots of nine traps separated by ~ 100 m of elevation, from the base to the summit of each mountain. Multivariate analyses identified spider assemblages that were associated with macro-habitats rather than with mountains. Local environmental variation (mainly in vegetation cover), precipitation and soil characteristics influenced the spatial variation in species composition. Characteristic indicator species showed high specificity and fidelity to macro-habitats, whereas vulnerable species showed high specificity and low fidelity to mountains or macro-habitats. We conclude that, on a regional scale, species adaptation to environmental gradients plays a more important role than dispersal limitation in structuring the taxonomic composition of spider assemblages. Moreover, the presence of indicator species suggests that spiders have a great potential as ecological indicators for evaluating the response of montane biodiversity to future climatic change.

The study was conducted under the “Uttar Pradesh Sodic Lands Reclamation Project” to examine changes that occurred in the reclaimed sodic land in two districts of Uttar Pradesh, India. The study focuses on long‐term seasonal changes in the floral diversity and soil characteristics of the reclaimed sodic land over a period of 10 y. The changes in the floristic composition, plant density, and soil characteristics (microbial biomass carbon [MBC], pH, exchangeable‐sodium percentage (ESP), and electrical conductivity) were compared among the different study plots after different years of sodic‐land reclamation. The study plots comprised reclaimed land with rice–wheat cultivation; semireclaimed land under rice cultivation only and nonreclaimed barren sodic land. There was a significant variation in the floristic composition of the three study plots. Dominance in the floristic composition was shifted from monocotyledonous weeds in the nonreclaimed sodic land to dicotyledonous weeds in the reclaimed land after 10 y of reclamation. Among the soil characteristics, the most remarkable changes were observed in soil MBC and ESP during the course of sodic‐land reclamation. Soil MBC increased up to 480% and ESP values decreased up to 79% in the reclaimed plots with reference to the nonreclaimed plots. The soil amelioration was more pronounced in the upper layer (0–30 cm) as compared to the lower layer (below 30 cm depth). A positive significant correlation was revealed between soil MBC and floristic composition of the reclaimed plots. These changes in floristic composition and soil characteristics could be used as good indicators of the eco‐restoration of the sodic lands. The present study provides useful insights in understanding the temporal progress of eco‐restoration in the reclaimed sodic lands.

Community assembly in aquatic habitats is heavily influenced by hydrology, but understanding the influence of other habitat conditions is also critical. Most studies focus on comparisons of geographically close communities that exist under diverse hydrological regimes, but this framework limits our ability to understand how conditions other than hydrology shape ephemeral wetland communities. Here, we investigated how macroinvertebrate communities vary with local, landscape, and climate variables in ephemeral wetlands across a large geographic range with few geographic barriers. We sampled ephemeral wetlands in North Dakota, New Mexico, and Texas (USA) in 2021 and in North Dakota and New Mexico in 2022. We used an array of hydrographic, climate, landscape, and spatial variables to relate taxonomic and functional macroinvertebrate community composition and diversity to habitat conditions. Taxonomic composition was overwhelmingly different among states and between years: landscape‐scale refuge availability explained variation in taxonomic composition, but local and climate‐scale variables only explained variation within the context of other variables. Trait composition was similar between most sampling groups, but distinct trait assemblages occurred in the North Dakota 2021 communities. No predictor variable matrix explained trait composition alone, but local, climate, landscape, and spatial arrangement predicted composition when considering the overlapping influence of other variables. Taxa and trait diversity indices were associated with increased refuge habitat at landscape scale. Our results show consistent trait structure across a large geographical scale in hydrologically similar wetlands, despite almost complete taxonomic turnover between regions. Patterns in taxonomic and functional composition imply that incorporating predictor variables at multiple scales is critical in understanding ephemeral wetland community composition. Despite similar hydrological regimes and potential for connectivity via dispersal, taxa replacement is high in ephemeral wetlands across regions within a single grassland macrosystem. Taxonomic composition and overall diversity change with the context provided by a diverse suite of structuring variables. Further, we show that in most cases, ephemeral hydrology elicits a similar trait response across climate regions.

Historical landscape domestication in ancestral forests with nutrient-poor soils in northwestern Amazonia

ABSTRACTAimDiversity patterns in forest understories have traditionally been studied using macroclimatic variables. However, microenvironmental conditions below forest canopies are likely more relevant, though difficult to obtain. Species composition of the canopy layers can serve as a proxy for capturing microenvironmental conditions underneath trees and shrubs. In this study, we modelled the understory plant species (herbaceous and small woody species < 2 m) composition across European forests.Time PeriodPresent day.LocationAll forest types across Europe.Taxa StudiedVascular plants.MethodsWe compared the performance of a baseline model relying solely on macroenvironmental predictor variables against several canopy‐informed models incorporating three β‐diversity facets (taxonomic, functional and phylogenetic) of the canopy layers (i.e., the tree and shrub layer). We subsequently decomposed the explained deviance in the observed spatial variation in taxonomic composition of the understory layer between macroenvironmental conditions and all three facets of canopy‐derived metrics of β‐diversity. We finally compared and mapped spatial predictions in understory plant species composition between the baseline model and the best‐performing canopy‐informed model.ResultsOur canopy‐informed models that included β‐diversity metrics of canopy layers outperformed the baseline model based solely on macroenvironmental predictors. Beta‐diversity metrics relying on canopy species composition provided a greater explanatory power than macroenvironmental predictors. Specifically, the taxonomic β‐diversity of the shrub layer, followed by that of the tree layer, was the main variable driving the most performant canopy‐informed model. Maps of the predicted understory species composition indicated greater site heterogeneity when relying on canopy‐informed models than on the baseline model.ConclusionsThis work highlights how the inclusion of taxonomical species composition from the canopy layers can significantly improve the modelling of the understory plant species composition.

The classical twin model was utilized in this study in an attempt to determine the importance of host genetics to the composition of the subgingival flora. Simultaneously, the effect of puberty on the flora composition was assessed. The compositions of the floras were significantly different at ages 11 and 14 in the same people, indicating that transition to an adult flora composition may be initiated during puberty. However, the numbers of subjects who had prepubertal and postpubertal testosterone levels in this study were too small to demonstrate significant differences based solely on testosterone level (P = 0.053 and 0.11 for tests of unrelated members, i.e., all twins "a," the first twin of each pair, and all twins "b," the second twin of each pair). Sixteen unrelated 11-year-old subjects had prepubertal levels of less than 30 ng of testosterone per dl of serum, and only six of these unrelated subjects had levels above 300 ng/dl by age 14. Of their twin siblings, who formed the second group of unrelated individuals, 15 had prepubertal levels and only 5 reached postpubertal levels. Unpaired t tests indicated that Veillonella atypica, Prevotella denticola, and Prevotella melaninogenica were among the species that contributed most to changes in flora composition during puberty. The compositions of subgingival floras of 11-year-old monozygous and dizygous male twins were significantly more similar than those of unrelated subjects in the study (P = 0.004 and 0.009, respectively). At 12.5 years of age, the floras of monozygous twins remained more similar than those of unrelated subjects (P = 0.001), but the dizygous-twin floras were not significantly more similar than those of unrelated people. This difference corresponded with moderate and varied testosterone levels within dizygous-twin pairs at age 12.5. By age 14 both monozygous and dizygous twins again had floras with compositions more similar than those of unrelated people (P = 0.008 and 0.002, respectively). Estimates of the genetic contributions to the increased similarity of the floras of twins as compared with floras of unrelated people indicated that the concentrations of several species in the flora may be influenced by host genetic factors. The prevalence of certain other species appeared to be controlled primarily by environment.

The Jeanne d'Arc Basin is a relatively small passive-margin rift basin that underlies what is now the northeastern corner of the Grand Banks of Newfoundland. In the Late Cretaceous and early Paleogene, the basin formed an elongated depression where sediment accumulated in and along the margins of a shallow-shelf sea. Seismic and well data were used to examine the Late Cretaceous and Paleogene evolution of the basin and to formally revise the existing stratigraphic classification scheme. In the Late Cretaceous, the western margin of the basin was characterized by a well-developed shelf and slope system comprised of the sand-prone Otter Bay and Fox Harbour members and the distally equivalent shale-prone Red Island and Bay Bulls members, respectively. These members record two main progradational episodes that are separated by a regional unconformity and a thick shale interval corresponding to the Bay Bulls Member. East of the shelf-slope system, Upper Cretaceous shale and sparse sandstone of the Dawson Canyon Formation and chalk of the Petrel Member and Wyandot Formation were deposited in a relatively condensed section. In the early part of the Paleogene, two main sandstone units, herein named the Avondale and South Mara members, were deposited east of the well-developed latest Cretaceous slope in the lower part of the Banquereau Formation. The Avondale Member corresponds to small sand-prone submarine fans deposited on the basin floor in the early Paleocene. The submarine fans were fed primarily by two canyons that incised the western margin of the basin, eroding the Late Cretaceous shelf and slope. Also in the Paleocene, siliceous shale and siltstone of the Tilton Member were deposited above bathymetric highs along the western and southern basin margins. The exact temporal relationship between the Tilton and Avondale members is poorly understood. The South Mara Member was deposited in the latest Paleocene and early Eocene. In the southern parts of the basin, it forms a regressive sandstone unit above the Tilton Member, deposited during a period of renewed shelf-slope progradation. In the central and northern parts of the basin, the South Mara Member corresponds to small, sand-prone submarine fans, similar to those deposited in the early Paleocene.

Windward vs. leeward: Inter-site variation in marine resource exploitation on Ebon Atoll, Republic of the Marshall Islands

In this study we evaluate how variations in taxonomic composition and physical structure of macrophyte stands affect plant-dwelling chironomid assemblages in highly variable macrophyte assemblages in two densely vegetated backwaters. By using multivariate explanatory techniques we found that similar vegetation composition did not unequivocally relate to similar chironomid assemblages, moreover the diversity of macrophyte stands did not correlate with the taxonomic diversity of chironomid assemblages in the backwaters investigated. Taxonomic composition and structural characteristics of the vegetation had little influence on the taxonomic or functional (i.e. feeding groups) composition of chironomid assemblages inhabiting them. Similarly, there are only weak relationships between the distribution of certain chironomid species or functional feeding groups and the environmental variables investigated. In general, the structure of the vegetation was more closely associated with the distribution of dominant chironomid taxa than compositional variables (i.e. density of specific macrophyte taxa). In summary, the structure of aquatic vegetation (i.e. position, size of a stand of vegetation, total plant density) and characteristics of the environment where it develops may be more important in shaping plant-dwelling chironomid assemblages than the taxonomic composition of the vegetation.

Summary Stream invertebrate assemblages are structured by environmental factors acting at multiple spatial scales. Identifying the spatial scale that most influences the species–environment relationships is a major goal of community ecology. We evaluated the importance of catchment and site scales and associated environmental variables in shaping Ephemeroptera, Plecoptera and Trichoptera (EPT) assemblages in Neotropical savanna headwater streams. Sampling sites were associated with 20 catchment‐scale variables that depicted land cover and land use as well as natural geophysical variables such as altitude and climate. Site‐scale habitat was characterised by 55 variables that described habitat hydromorphology, substrate, flow, canopy, in‐stream cover and water quality. EPT traits were assessed using 28 categories of 7 biological traits, which represented the best available current knowledge for EPT in Neotropical savanna streams. We analysed the relationships between the catchment‐ and site‐scale habitat variables and the taxonomic and trait composition of insect assemblages using 1,760 samples collected in 160 stream sites. Catchment‐ and site‐scale variables both explained significant variation in EPT taxon and trait composition. Substrate, habitat hydromorphology and land use most influenced variation in taxonomic composition, whereas trait composition was mainly affected by land use. Catchment geographic position explained less assemblage variation. To our knowledge, this study is the first assessment of the impact of catchment‐ and site‐scale variables on the trait and taxon composition of stream insect assemblages in Neotropical savanna streams. It highlights the need for better regional biological knowledge of invertebrates to generate more general trait‐based approaches in freshwater ecosystem conservation.

Thinning after selective logging facilitates floristic composition recovery in a tropical rain forest of Central Africa

We developed empirical models for fish, macroinvertebrate, and diatom assemblages to assess the biological condition of 268 streams sampled from 1993 to 2002 in 7 major river basins in the Appalachian region of the USA. These models estimate the expected taxonomic composition at each site based on observed variation in taxonomic composition at reference sites. The index, O/E, is the ratio of the number of predicted taxa that were observed (O) to that expected (E) to occur at a site and is a measure of taxonomic completeness. We compared how O/E for each assemblage varied among major landuse settings and whether impaired assemblages were associated with particular physicochemical conditions. We also examined concordance among assemblages in their response to stress. Biological, chemical, and physical data were collected following consistent protocols. We used land-cover criteria, published data, and topographic maps to classify sites by major landuse setting. Fish, macroinvertebrate, and diatom assemblages had been sampled at 73, 108, and 52, respectively, of the least disturbed sites used to establish reference conditions. The models accounted for a substantial portion of the natural variation in taxonomic composition across sites that was associated with biogeographic, climatic, and basin-scale factors and generally were unbiased across the range of environmental gradients observed in the region. Assessments at nonreference sites showed that impairment of fish and macroinvertebrate assemblages was most strongly associated with agriculture and urban land uses, whereas impairment of diatom assemblages was most strongly associated with mining in the basin. Concordance in assessments among assemblages was not strong. Assessments based on 2 assemblages differed in 28 to 57% of cases, and assessments were never concordant for cases where all 3 assemblages were sampled. Furthermore, only ½ of these cases would have been assessed as ecologically impaired had only 1 assemblage been sampled. Differences between observed and predicted frequencies of occurrence for individual taxa were generally consistent with known tolerances to environmental stressors and might aid in identifying causes of biological impairment.

Status of plant megafossils during the early Paleogene in India