Abstract

Acceptance of capillary isoelectric focusing (cIEF) as a routine analytical method has been limited by variable migration times, irreproducible patterns, and sample precipitation. Poor separation reproducibility can be traced to a number of factors. In this paper we explore the possibility of eliminating reagents without buffering capacity, and the use of internal markers. An often overlooked optimization stage of cIEF is mobilization. We demonstrate that hydraulic mobilization can be finely tuned by manipulating the pressure applied, and that ion addition mobilization can be greatly improved by properly selecting the type of ion used and its concentration. By limiting the pH range of the ampholytes to 8.5 or less, hundreds of runs on an individual capillary are possible, which is a necessity for routine analysis.

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