Abstract

Abiotic and biotic stresses adversely affect rice growth, development and grain yield. Traditional rice breeding techniques are insufficient in modern agriculture to meet the growing population’s food needs on a long-term basis. The development of DNA markers closely linked to target genes or QTLs on rice chromosomes, and advanced molecular techniques, such as marker-assisted selection (MAS), have encouraged the evolution of contemporary techniques in rice genetics and breeding, such as gene pyramiding. Gene pyramiding refers to the act of combining two or more genes from multiple parents into a single genotype, which allows the overexpression of more than one gene for broad-spectrum abiotic and biotic stress resistance. Marker-assisted pedigree, backcrossing and pseudo-backcrossing methods can increase the conventional breeding speed by reducing the number of breeding generations in order to enhance the pyramiding process. Pyramiding is affected by several factors: the number of transferred genes; the range within gene and flanking markers; the number of chosen populations in every breeding generation; the features of genes and germplasms; and the potentiality of breeders to identify the target genes. Modern breeding methods, such as the marker-assisted backcrossing approach, have made gene pyramiding more precise and reliable for the development of stress-tolerant rice varieties in the coming decades. This review presents up-to-date knowledge on gene pyramiding schemes, marker-assisted gene pyramiding techniques, the efficiency of marker-assisted gene pyramiding and the advantages and limitations of gene pyramiding methods. This review also reports on the potential application of marker-assisted selection breeding to develop stress-tolerant rice varieties that stabilize abiotic and biotic stresses. This review will help rice breeders to improve yields by increasing rice productivity under abiotic and biotic stress conditions.

Highlights

  • Rice (Oryza sativa L) is the world’s largest staple food crop, especially in Asia and Africa, and is consumed by more than 3.5 billion people

  • The results indicated that kompetitive allele specific PCR (KASP) markers were efficient in identifying BC1 F1 and BC2 F1 plants with a high cooking and eating quality and in quickly recovering the recurrent parent genome (RPG)

  • In another study, 73 KASP markers were used to recover the RPG in the BC2 F1 and BC2 F2 generations, and the result indicated that the RPG was 84.5% and 96.2% in the

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Summary

Introduction

Rice (Oryza sativa L) is the world’s largest staple food crop, especially in Asia and Africa, and is consumed by more than 3.5 billion people. Sustainability 2021, 13, 10806 an increasing number of abiotic and biotic stress combinations as a result of global warming and possible climatic change This has a negative impact on rice growth and grain yield production [4,5,6,7,8,9,10,11]. Biotic stresses (pathogens, pests, weeds) and abiotic stresses (drought, submergence, salinity, heat, cold) negatively impact rice production worldwide. The transferral of a single disease-resistant gene was declared to have imbued resistance into elite rice varieties [17,18]; within 2 or 3 years, breakdowns of resistance occurred This was due to changes in patho-type frequency, the development of new pathogens via mutation or other processes. This up-to-date guidance will help breeders to develop rice varieties with durable resistance against abiotic and biotic stresses

A Definite Gene Pyramiding Diagram
Gene Pyramiding through Conventional Backcrossing
Gene Pyramiding through Marker-Assisted Selection
Marker-Assisted Gene Pyramiding Techniques
Popularly
Efficiency of MAS-Based Gene Pyramiding in Rice
Solidity or Firmness
Minimization of Linkage Drag
Efficiency and Cost-Effectiveness
Availability of Markers and Molecular Techniques
Reduce Breeding Generations
Limitations of Marker-Assisted Gene Pyramiding
Marker-Assisted Gene Pyramiding for Abiotic and Biotic Stresses in Rice—Some
Marker-Assisted Gene Pyramiding for Blast Pathogens in Rice
Marker-Assisted Gene Pyramiding for Bacterial Blight Resistance in Rice
Marker-Assisted Gene Pyramiding for Rice Sheath Blight Resistance in Rice
Marker-Assisted Gene Pyramiding for Brown Planthopper Resistance in Rice
Marker-Assisted Gene Pyramiding for Drought Stress in Rice
Marker-Assisted Gene Pyramiding for Submergence Tolerance in Rice
Marker-Assisted Gene Pyramiding for Salt Tolerance Rice
Findings
Conclusions
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