Optimisation of MTGase production in Pichia pastoris under controlled growth rates and oxygen conditions

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Abstract In this study, microbial transglutaminase (MTGase) enzyme was produced recombinantly in Pichia pastoris with the constitutive GAP promoter under different growth rate-dependent normoxic and ethanol-dependent hypoxic conditions. The fermentations were performed at 20 °C temperature and the pH of 7. It was observed that the maximum enzyme production was 6236.3 U L −1 at the lowest specific growth rate 0.015 μ, in the normoxia fed-batch culture. While there was no statistically significant difference in wet cell weight at different growth rates under normoxic conditions, the highest total protein (307.7 mg L −1 ) was obtained at 0.015 µ. Furthermore, MTGase production was tested under hypoxic conditions with low oxygen demand by maintaining the ethanol concentration at 1% (v/v); however, unexpectedly, hypoxic conditions were not achieved at high pH and low temperature. It was concluded that hypoxia strategy is not suitable for producing MTGase in P. pastoris. This is the first study on optimisation of different growth rates and hypoxic conditions for MTGase production under the control of GAP promoter. In this study, the fermentation parameters were systematically optimised to increase the yield of MTGase enzyme.

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  • 10.1074/jbc.m406577200
Cyclooxygenase-2 Suppresses Hypoxia-induced Apoptosis via a Combination of Direct and Indirect Inhibition of p53 Activity in a Human Prostate Cancer Cell Line
  • Feb 1, 2005
  • Journal of Biological Chemistry
  • Xin-Hua Liu + 4 more

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  • Abstract
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Effect of Nitric Oxide Donor on IL-6 and PDGF-BB: Comparison of Diabetic Versus Normal Tissue Under Hypoxic and Normoxic Conditions
  • Jul 22, 2008
  • Journal of Oral and Maxillofacial Surgery
  • Andrew P Wightman

Effect of Nitric Oxide Donor on IL-6 and PDGF-BB: Comparison of Diabetic Versus Normal Tissue Under Hypoxic and Normoxic Conditions

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Molecular mechanisms of transcription activation by HLF and HIF1alpha in response to hypoxia: their stabilization and redox signal-induced interaction with CBP/p300.
  • Apr 1, 1999
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Hypoxia-inducible factor 1 alpha (HIF1alpha) and its related factor, HLF, activate expression of a group of genes such as erythropoietin in response to low oxygen. Transfection analysis using fusion genes of GAL4DBD with various fragments of the two factors delineated two transcription activation domains which are inducible in response to hypoxia and are localized in the C-terminal half. Their sequences are conserved between HLF and HIF1alpha. One is designated NAD (N-terminal activation domain), while the other is CAD (C-terminal activation domain). Immunoblot analysis revealed that NADs, which were rarely detectable at normoxia, became stabilized and accumulated at hypoxia, whereas CADs were constitutively expressed. In the mammalian two-hybrid system, CAD and NAD baits enhanced the luciferase expression from a reporter gene by co-transfection with CREB-binding protein (CBP) prey, whereas CAD, but not NAD, enhanced beta-galactosidase expression in yeast by CBP co-expression, suggesting that NAD and CAD interact with CBP/p300 by a different mechanism. Co-transfection experiments revealed that expression of Ref-1 and thioredoxin further enhanced the luciferase activity expressed by CAD, but not by NAD. Amino acid replacement in the sequences of CADs revealed a specific cysteine to be essential for their hypoxia-inducible interaction with CBP. Nuclear translocation of thioredoxin from cytoplasm was observed upon reducing O2 concentrations.

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Toxic effects of microcystin‐LR on the HepG2 cell line under hypoxic and normoxic conditions
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Abstract P1-18-25: Quantifying the effects of combination trastuzumab and radiation therapy in HER2 positive breast cancer under normoxic and hypoxic conditions
  • Feb 14, 2020
  • Cancer Research
  • Meghan Bloom + 3 more

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  • Cite Count Icon 132
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Targeting the Warburg effect via LDHA inhibition engages ATF4 signaling for cancer cell survival.
  • Sep 12, 2018
  • The EMBO Journal
  • Gaurav Pathria + 10 more

Nutrient restriction reprograms cellular signaling and metabolic network to shape cancer phenotype. Lactate dehydrogenase A (LDHA) has a key role in aerobic glycolysis (the Warburg effect) through regeneration of the electron acceptor NAD+ and is widely regarded as a desirable target for cancer therapeutics. However, the mechanisms of cellular response and adaptation to LDHA inhibition remain largely unknown. Here, we show that LDHA activity supports serine and aspartate biosynthesis. Surprisingly, however, LDHA inhibition fails to impact human melanoma cell proliferation, survival, or tumor growth. Reduced intracellular serine and aspartate following LDHA inhibition engage GCN2-ATF4 signaling to initiate an expansive pro-survival response. This includes the upregulation of glutamine transporter SLC1A5 and glutamine uptake, with concomitant build-up of essential amino acids, and mTORC1 activation, to ameliorate the effects of LDHA inhibition. Tumors with low LDHA expression and melanoma patients acquiring resistance to MAPK signaling inhibitors, which target the Warburg effect, exhibit altered metabolic gene expression reminiscent of the ATF4-mediated survival signaling. ATF4-controlled survival mechanisms conferring synthetic vulnerability to the approaches targeting the Warburg effect offer efficacious therapeutic strategies.

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  • Research Article
  • Cite Count Icon 4
  • 10.3389/fmicb.2019.01995
Microtiter Screening Reveals Oxygen-Dependent Antimicrobial Activity of Natural Products Against Mastitis-Causing Bacteria
  • Aug 28, 2019
  • Frontiers in Microbiology
  • Scott A Ferguson + 10 more

In this study we investigated the influence of oxygen availability on a phenotypic microtiter screen to identify new, natural product inhibitors of growth for the bovine mastitis-causing microorganisms; Streptococcus uberis, Staphylococcus aureus, and Escherichia coli. Mastitis is a common disease in dairy cattle worldwide and is a major cause of reduced milk yield and antibiotic usage in dairy herds. Prevention of bovine mastitis commonly relies on the application of teat disinfectants that contain either iodine or chlorhexidine. These compounds are used extensively in human clinical settings and increased tolerance to chlorhexidine has been reported in both Gram-positive and Gram-negative microorganisms. As such new, non-human use alternatives are required for the agricultural industry. Our screening was conducted under normoxic (20% oxygen) and hypoxic (<1% oxygen) conditions to mimic the conditions on teat skin and within the mammary gland respectively, against two natural compound libraries. No compounds inhibited E. coli under either oxygen condition. Against the Gram-positive microorganisms, 12 inhibitory compounds were identified under normoxic conditions, and 10 under hypoxic conditions. Data revealed a clear oxygen-dependency amongst compounds inhibiting growth, with only partial overlap between oxygen conditions. The oxygen-dependent inhibitory activity of a naturally occurring quinone, β-lapachone, against S. uberis was subsequently investigated and we demonstrated that this compound is only active under normoxic conditions with a minimum inhibitory concentration and minimum bactericidal concentration of 32 μM and kills via a reactive oxygen species-dependent mechanism as has been demonstrated in other microorganisms. These results demonstrate the importance of considering oxygen-availability in high-throughput inhibitor discovery.

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  • Cite Count Icon 46
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Low Oxygen Tension and Synthetic Nanogratings Improve the Uniformity and Stemness of Human Mesenchymal Stem Cell Layer
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  • Molecular Therapy
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Low Oxygen Tension and Synthetic Nanogratings Improve the Uniformity and Stemness of Human Mesenchymal Stem Cell Layer

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Diverse effects of NOS inhibition on mitochondrial bioenergetics in rat primary cortical neuronal cells under normoxia and hypoxia
  • Apr 1, 2018
  • The FASEB Journal
  • Venkata Nlr Sure + 5 more

ObjectiveIschemic brain injury has been shown to be increased in endothelial nitric oxide synthase (eNOS) knockout mice but reduced in neuronal nitric oxide synthase (nNOS) knockout mice compared to the wild‐type mice. It has been proposed that NO derived from nNOS in neurons is detrimental whereas NO derived from eNOS in endothelial cells is protective after stroke. However, the functional mechanism underlying this protection or damage has never been studied. Mitochondria play an important role in a wide range of physiological and pathophysiological processes. Besides the generation of cellular energy, mitochondria are also involved in reactive oxygen species (ROS) production and the activation of cell death pathways. Therefore, the effect of NOS inhibitors on mitochondrial respiration is important to investigate as mitochondria determine the fate of cell survival after stroke or ischemic injury. Our objective is to determine the effects of NOS inhibition on mitochondrial bioenergetics in primary rat cortical neurons under normoxic and oxygen‐glucose deprivation‐reoxygenation (OGD‐R) conditions.MethodsCortical neurons were isolated from brain and exposed to normoxic and OGD‐R conditions with and without non‐specific NOS inhibitor N‐ω‐propyl‐L‐arginine (L‐NAME). Oxygen consumption rates (OCR) and respiratory parameters were measured using Seahorse XFe24 cell mito‐stress test (Agilent technologies). Cell viability was measured using CCK‐8 kit to determine the effect of NOS inhibition under hypoxic and normoxic conditions. Electron spin resonance (ESR) spectroscopy (Bruker Bio‐Spin spectrometer, Germany) was used to measure ROS using spin probe CMH.ResultsIn neurons, OCR showed a decrease in basal respiration, maximal respiration, spare respiratory capacity, proton leak and non‐mitochondrial respiration under hypoxic condition compared to normoxic control. Interestingly, NOS inhibition under normoxic conditions increased basal respiration, maximal respiration, spare respiratory capacity, and non‐mitochondrial respiration but not proton leak whereas, NOS inhibition decreased basal respiration, maximal respiration, spare respiratory capacity, proton leak and non‐mitochondrial respiration under hypoxic condition. Thus, NOS inhibition has opposite effects on mitochondrial respiratory parameters under normoxic and hypoxic conditions. Viability studies showed NOS inhibition has improved cell viability under hypoxic conditions. In contrast, NOS inhibition under normoxic conditions showed a decrease in cell viability. ROS measurements by ESR have shown that L‐NAME treatment increased ROS levels under normoxic conditions, however, NOS inhibition decreased ROS levels under hypoxic conditions.ConclusionsNOS inhibition has opposite effects on mitochondrial bioenergetics, viability and superoxide levels under hypoxia compared to normoxia. nNOS appears to inhibit ROS generation under hypoxia but promotes the ROS generation following hypoxia possibly due to uncoupling of nNOS. Thus, the change in the generation of free radicals may underlie the diverse effects of nNOS in neurons following exposure to normoxia and hypoxiaSupport or Funding InformationAmerican Heart Association (PVG: 14SDG20490359 and VNS: 16PRE31450006), and National Institute of Health: (PVK: R01NS094834).This abstract is from the Experimental Biology 2018 Meeting. There is no full text article associated with this abstract published in The FASEB Journal.

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  • Cite Count Icon 59
  • 10.1074/jbc.m414694200
Activation of HIF-prolyl Hydroxylases by R59949, an Inhibitor of the Diacylglycerol Kinase
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  • Journal of Biological Chemistry
  • Elisa Temes + 7 more

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Differential phenotypic behaviors of human degenerative nucleus pulposus cells under normoxic and hypoxic conditions: influence of oxygen concentration during isolation, expansion, and cultivation
  • Jun 22, 2013
  • The Spine Journal
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  • 10.1080/10236244.2015.1090205
Individual variation in metabolism and swimming performance in juvenile black carp (Mylopharyngodon piceus) and the effects of hypoxia
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