Abstract

Pleistocene glacial–interglacial climatic oscillations greatly shaped the current genetic structure of many species. However, geographic features may influence the impact of climatic cycling. Distinct geographic and environmental characters between northern and southern parts of the eastern Qinghai–Tibetan Plateau (EQTP) facilitate explorations into the impacts of geographic features on species. The northern parts of EQTP contain large areas of marsh, and the environment is rather homogeneous. In contrast, the southern EQTP harbors complex alpine valleys and a much more heterogeneous setting. We evaluate DNA sequence variation from both the mitochondrial and nuclear genomes in Nanorana pleskei, a species endemic to the EQTP. Hypothesis testing on the evolutionary history of N. pleskei indicates that northern populations can disperse freely, but alpine valleys isolate southern populations. Demographic histories between northern and southern populations also differ. Northern populations appear to have experienced population expansions, while southern frogs exhibit a far more stable demographic history. By combining climatic analyses and species' distribution models, our study suggests that geographic and environmental features drive the differences between the northern and southern EQTP.

Highlights

  • Pleistocene climatic cycling is one of the most important drivers of contemporary diversity in many temperate species and communities

  • Because geological features may influence demographic history, and given the differences in geography between northern eastern Qinghai–Tibetan Plateau (EQTP) and southern EQTP, we test hypotheses related to the impact of climatic cycling and geography on organisms

  • We use gene sequences and climatic data to test two primary hypotheses: (1) different geographic features in northern EQTP and southern EQTP influenced N. pleskei in a similar way and (2) the different environments in northern EQTP and southern EQTP impacted the demographic history of N. pleskei in a similar way

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Summary

| INTRODUCTION

Pleistocene climatic cycling is one of the most important drivers of contemporary diversity in many temperate species and communities. Following the global cyclical cooling–warming events in the Quaternary, the distributions of various organisms experienced concomitant expansions and contractions During this process, vicariance drove the divergence of populations, and the disappearance of barriers resulted in dispersal and secondary contact. Complex geographic features may harbor suitable microhabitats in the form of micro-­ refugia These refugia may buffer the impacts of climate changes and shape patterns of genetic diversity by stabilizing populations. The northern EQTP (nEQTP) occurs east of the Bayanhar Mountains and north of the Qionglai Mountains (Figures S1 and 1) It largely consists of high-­elevation plains, and the environment is more homogeneous than in the southern EQTP (sEQTP). The sEQTP exists south of the Bayanhar Mountains (You & Yang, 2013) This region belongs to the Hengduan Mountains, which are famous for their complex environmental features and diverse ecozones. Glacial refugia, which have contributed greatly to the formation of genetic diversity pattern and strongly impacted demographic

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| MATERIALS AND METHODS
16 All rivers are barriers
| DISCUSSION
| CONCLUSIONS
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